RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 NT5DC1Q5TFE4 455 aa4.37□□□□□ -1.71
SMG1-212ENST00000566328 INTS3Q68E01 1043 aaKnown RBP4.37□□□□□ -1.71
SMG1-212ENST00000566328 SAPCD2Q86UD0 394 aa4.37□□□□□ -1.71
SMG1-212ENST00000566328 LSRQ86X29 649 aaPredicted RBP4.37□□□□□ -1.71
SMG1-212ENST00000566328 CCDC144CPQ8IYA2 1237 aa4.37□□□□□ -1.71
SMG1-212ENST00000566328 FNIP1Q8TF40 1166 aa4.37□□□□□ -1.71
SMG1-212ENST00000566328 SLC12A9Q9BXP2 914 aa4.37□□□□□ -1.71
SMG1-212ENST00000566328 SUCOQ9UBS9 1254 aaKnown RBP4.37□□□□□ -1.71
SMG1-212ENST00000566328 PMF1-BGLAPU3KQ54 211 aa4.37□□□□□ -1.71
SMG1-212ENST00000566328 SH3D21A4FU49 640 aa4.36□□□□□ -1.71
SMG1-212ENST00000566328 F8W031 263 aaPredicted RBP4.36□□□□□ -1.71
SMG1-212ENST00000566328 ERCC3P19447 782 aa4.36□□□□□ -1.71
SMG1-212ENST00000566328 CRKP46108 304 aa4.36□□□□□ -1.71
SMG1-212ENST00000566328 CEBPAP49715 358 aaPredicted RBP4.36□□□□□ -1.71
SMG1-212ENST00000566328 RBM10P98175 930 aaKnown RBP4.36□□□□□ -1.71
SMG1-212ENST00000566328 VWA3BQ502W6 1294 aa4.36□□□□□ -1.71
SMG1-212ENST00000566328 RTP2Q5QGT7 225 aa4.36□□□□□ -1.71
SMG1-212ENST00000566328 DNAJC14Q6Y2X3 702 aaPredicted RBP4.36□□□□□ -1.71
SMG1-212ENST00000566328 HS2ST1Q7LGA3 356 aa4.36□□□□□ -1.71
SMG1-212ENST00000566328 USP48Q86UV5 1035 aa4.36□□□□□ -1.71
SMG1-212ENST00000566328 CABP7Q86V35 215 aa4.36□□□□□ -1.71
SMG1-212ENST00000566328 SMARCC1Q92922 1105 aaPredicted RBP4.36□□□□□ -1.71
SMG1-212ENST00000566328 SRRTQ9BXP5 876 aaKnown RBP4.36□□□□□ -1.71
SMG1-212ENST00000566328 COPRSQ9NQ92 184 aa4.36□□□□□ -1.71
SMG1-212ENST00000566328 FGF10O15520 208 aaPredicted RBP4.35□□□□□ -1.71
SMG1-212ENST00000566328 FBLN1P23142 703 aa4.35□□□□□ -1.71
SMG1-212ENST00000566328 MAGEA10P43363 369 aaPredicted RBP4.35□□□□□ -1.71
SMG1-212ENST00000566328 GJA9P57773 515 aa4.35□□□□□ -1.71
SMG1-212ENST00000566328 PRR5P85299 388 aa4.35□□□□□ -1.71
SMG1-212ENST00000566328 ANKRD39Q53RE8 183 aa4.35□□□□□ -1.71
SMG1-212ENST00000566328 NLGN2Q8NFZ4 835 aa4.35□□□□□ -1.71
SMG1-212ENST00000566328 NKD1Q969G9 470 aa4.35□□□□□ -1.71
SMG1-212ENST00000566328 SLC9A7Q96T83 725 aa4.35□□□□□ -1.71
SMG1-212ENST00000566328 SPATA25Q9BR10 227 aa4.35□□□□□ -1.71
SMG1-212ENST00000566328 UBP1Q9NZI7 540 aa4.35□□□□□ -1.71
SMG1-212ENST00000566328 GGT7Q9UJ14 662 aa4.35□□□□□ -1.71
SMG1-212ENST00000566328 SF3B6Q9Y3B4 125 aaKnown RBP4.35□□□□□ -1.71
SMG1-212ENST00000566328 IMPDH2P12268 514 aa4.34□□□□□ -1.71
SMG1-212ENST00000566328 ATF2P15336 505 aa4.34□□□□□ -1.71
SMG1-212ENST00000566328 L1CAMP32004 1257 aa4.34□□□□□ -1.71
SMG1-212ENST00000566328 PMS1P54277 932 aaKnown RBP4.34□□□□□ -1.71
SMG1-212ENST00000566328 HTRA3P83110 453 aa4.34□□□□□ -1.71
SMG1-212ENST00000566328 FERMT3Q86UX7 667 aa4.34□□□□□ -1.71
SMG1-212ENST00000566328 SLITRK4Q8IW52 837 aa4.34□□□□□ -1.71
SMG1-212ENST00000566328 CARFQ8N187 725 aa4.34□□□□□ -1.71
SMG1-212ENST00000566328 ZNF526Q8TF50 670 aaPredicted RBP4.34□□□□□ -1.71
SMG1-212ENST00000566328 ALG3Q92685 438 aa4.34□□□□□ -1.71
SMG1-212ENST00000566328 NT5C1AQ9BXI3 368 aa4.34□□□□□ -1.71
SMG1-212ENST00000566328 NTMQ9P121 344 aa4.34□□□□□ -1.71
SMG1-212ENST00000566328 FHOD1Q9Y613 1164 aa4.34□□□□□ -1.71
SMG1-212ENST00000566328 PLA2G1BP04054 148 aaKnown RBP4.33□□□□□ -1.72
SMG1-212ENST00000566328 POU4F1Q01851 419 aa4.33□□□□□ -1.72
SMG1-212ENST00000566328 TRIM26Q12899 539 aaPredicted RBP4.33□□□□□ -1.72
SMG1-212ENST00000566328 TTLL7Q6ZT98 887 aa4.33□□□□□ -1.72
SMG1-212ENST00000566328 B3GNT8Q7Z7M8 397 aa4.33□□□□□ -1.72
SMG1-212ENST00000566328 ADGRG2Q8IZP9 1017 aa4.33□□□□□ -1.72
SMG1-212ENST00000566328 PTCHD1Q96NR3 888 aa4.33□□□□□ -1.72
SMG1-212ENST00000566328 SMPD4Q9NXE4 827 aa4.33□□□□□ -1.72
SMG1-212ENST00000566328 ADAMTS1Q9UHI8 967 aa4.33□□□□□ -1.72
SMG1-212ENST00000566328 NUDT5Q9UKK9 219 aa4.33□□□□□ -1.72
SMG1-212ENST00000566328 A0A1B0GTL3 188 aa4.32□□□□□ -1.72
SMG1-212ENST00000566328 C9IYK1 514 aa4.32□□□□□ -1.72
SMG1-212ENST00000566328 H0Y8X5 98 aa4.32□□□□□ -1.72
SMG1-212ENST00000566328 NOBOXO60393 691 aa4.32□□□□□ -1.72
SMG1-212ENST00000566328 ZBTB7AO95365 584 aa4.32□□□□□ -1.72
SMG1-212ENST00000566328 ITGB3P05106 788 aa4.32□□□□□ -1.72
SMG1-212ENST00000566328 ASGR2P07307 311 aa4.32□□□□□ -1.72
SMG1-212ENST00000566328 CNR2P34972 360 aa4.32□□□□□ -1.72
SMG1-212ENST00000566328 ZNF445P59923 1031 aa4.32□□□□□ -1.72
SMG1-212ENST00000566328 SLC9A5Q14940 896 aa4.32□□□□□ -1.72
SMG1-212ENST00000566328 TAB3Q8N5C8 712 aaPredicted RBP4.32□□□□□ -1.72
SMG1-212ENST00000566328 DDX1Q92499 740 aaKnown RBP4.32□□□□□ -1.72
SMG1-212ENST00000566328 RNF34Q969K3 372 aa4.32□□□□□ -1.72
SMG1-212ENST00000566328 TSPAN17Q96FV3 270 aa4.32□□□□□ -1.72
SMG1-212ENST00000566328 PEX11GQ96HA9 241 aa4.32□□□□□ -1.72
SMG1-212ENST00000566328 TM9SF2Q99805 663 aa4.32□□□□□ -1.72
SMG1-212ENST00000566328 LNPKQ9C0E8 428 aa4.32□□□□□ -1.72
SMG1-212ENST00000566328 GP6Q9HCN6 339 aa4.32□□□□□ -1.72
SMG1-212ENST00000566328 HCFC2Q9Y5Z7 792 aa4.32□□□□□ -1.72
SMG1-212ENST00000566328 A0A087WZG4 1122 aa4.31□□□□□ -1.72
SMG1-212ENST00000566328 FAM86C2PA6NEL3 165 aa4.31□□□□□ -1.72
SMG1-212ENST00000566328 SHOXO15266 292 aa4.31□□□□□ -1.72
SMG1-212ENST00000566328 GLI4P10075 376 aa4.31□□□□□ -1.72
SMG1-212ENST00000566328 ITGA4P13612 1032 aa4.31□□□□□ -1.72
SMG1-212ENST00000566328 CD247P20963 164 aa4.31□□□□□ -1.72
SMG1-212ENST00000566328 TACR1P25103 407 aa4.31□□□□□ -1.72
SMG1-212ENST00000566328 SARSP49591 514 aaKnown RBP4.31□□□□□ -1.72
SMG1-212ENST00000566328 TCEAL1Q15170 157 aa4.31□□□□□ -1.72
SMG1-212ENST00000566328 EEF1DP3Q658K8 133 aa4.31□□□□□ -1.72
SMG1-212ENST00000566328 FIBCD1Q8N539 461 aa4.31□□□□□ -1.72
SMG1-212ENST00000566328 CPA5Q8WXQ8 436 aa4.31□□□□□ -1.72
SMG1-212ENST00000566328 FCRL3Q96P31 734 aaPredicted RBP4.31□□□□□ -1.72
SMG1-212ENST00000566328 PCDH18Q9HCL0 1135 aa4.31□□□□□ -1.72
SMG1-212ENST00000566328 ZNRF3Q9ULT6 936 aa4.31□□□□□ -1.72
SMG1-212ENST00000566328 DIS3Q9Y2L1 958 aaKnown RBP4.31□□□□□ -1.72
SMG1-212ENST00000566328 CD3EP07766 207 aa4.3□□□□□ -1.72
SMG1-212ENST00000566328 ACRP10323 421 aa4.3□□□□□ -1.72
SMG1-212ENST00000566328 PMLP29590 882 aa4.3□□□□□ -1.72
SMG1-212ENST00000566328 MC3RP41968 323 aa4.3□□□□□ -1.72
SMG1-212ENST00000566328 ADAM17P78536 824 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms