RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 TOMM22Q9NS69 142 aa19.53■□□□□ 0.72
TSR3-202ENST00000566296 CCPG1Q9ULG6 757 aa19.53■□□□□ 0.72
TSR3-202ENST00000566296 MYO9BQ13459 2157 aa19.53■□□□□ 0.72
TSR3-202ENST00000566296 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.52■□□□□ 0.72
TSR3-202ENST00000566296 NMT2O60551 498 aa19.52■□□□□ 0.72
TSR3-202ENST00000566296 CABYRO75952 493 aa19.52■□□□□ 0.72
TSR3-202ENST00000566296 NKX3-2P78367 333 aa19.52■□□□□ 0.72
TSR3-202ENST00000566296 BEX3Q00994 111 aa19.52■□□□□ 0.72
TSR3-202ENST00000566296 NSMFQ6X4W1 530 aa19.52■□□□□ 0.72
TSR3-202ENST00000566296 DCAF4Q8WV16 495 aa19.52■□□□□ 0.72
TSR3-202ENST00000566296 IL17RBQ9NRM6 502 aa19.52■□□□□ 0.72
TSR3-202ENST00000566296 ANAPC4Q9UJX5 808 aa19.52■□□□□ 0.72
TSR3-202ENST00000566296 SALL3Q9BXA9 1300 aa19.51■□□□□ 0.71
TSR3-202ENST00000566296 CTAGE5O15320 804 aa19.51■□□□□ 0.71
TSR3-202ENST00000566296 FOXP2O15409 715 aa19.51■□□□□ 0.71
TSR3-202ENST00000566296 ORC4O43929 436 aa19.51■□□□□ 0.71
TSR3-202ENST00000566296 SNAP25P60880 206 aa19.51■□□□□ 0.71
TSR3-202ENST00000566296 FSCN1Q16658 493 aaKnown RBP19.51■□□□□ 0.71
TSR3-202ENST00000566296 ANKRD45Q5TZF3 282 aa19.51■□□□□ 0.71
TSR3-202ENST00000566296 CXCL17Q6UXB2 119 aa19.51■□□□□ 0.71
TSR3-202ENST00000566296 RASGRP2Q7LDG7 609 aa19.51■□□□□ 0.71
TSR3-202ENST00000566296 TIFAQ96CG3 184 aa19.51■□□□□ 0.71
TSR3-202ENST00000566296 CYP39A1Q9NYL5 469 aa19.51■□□□□ 0.71
TSR3-202ENST00000566296 GNEQ9Y223 722 aaKnown RBP19.51■□□□□ 0.71
TSR3-202ENST00000566296 CDH23Q9H251 3354 aa19.51■□□□□ 0.71
TSR3-202ENST00000566296 LCTP09848 1927 aa19.51■□□□□ 0.71
TSR3-202ENST00000566296 ICAM1P05362 532 aa19.5■□□□□ 0.71
TSR3-202ENST00000566296 CSF2RAP15509 400 aa19.5■□□□□ 0.71
TSR3-202ENST00000566296 MUM1L1Q5H9M0 696 aa19.5■□□□□ 0.71
TSR3-202ENST00000566296 TMEM240Q5SV17 173 aa19.5■□□□□ 0.71
TSR3-202ENST00000566296 VPS53Q5VIR6 699 aa19.5■□□□□ 0.71
TSR3-202ENST00000566296 FBXO16Q8IX29 292 aaPredicted RBP19.5■□□□□ 0.71
TSR3-202ENST00000566296 MTIF3Q9H2K0 278 aaKnown RBP19.5■□□□□ 0.71
TSR3-202ENST00000566296 VTA1Q9NP79 307 aa19.5■□□□□ 0.71
TSR3-202ENST00000566296 INCENPQ9NQS7 918 aa19.5■□□□□ 0.71
TSR3-202ENST00000566296 HELLSQ9NRZ9 838 aa19.5■□□□□ 0.71
TSR3-202ENST00000566296 ASTN1O14525 1302 aa19.5■□□□□ 0.71
TSR3-202ENST00000566296 RRP12Q5JTH9 1297 aaKnown RBP19.49■□□□□ 0.71
TSR3-202ENST00000566296 EEPD1Q7L9B9 569 aa19.49■□□□□ 0.71
TSR3-202ENST00000566296 SEZ6LQ9BYH1 1024 aa19.49■□□□□ 0.71
TSR3-202ENST00000566296 RANBP17Q9H2T7 1088 aaKnown RBP19.49■□□□□ 0.71
TSR3-202ENST00000566296 ZNF576Q9H609 170 aa19.49■□□□□ 0.71
TSR3-202ENST00000566296 ADD3Q9UEY8 706 aaKnown RBP19.49■□□□□ 0.71
TSR3-202ENST00000566296 DYNC1LI2O43237 492 aaPredicted RBP19.48■□□□□ 0.71
TSR3-202ENST00000566296 TOP1P11387 765 aaKnown RBP19.48■□□□□ 0.71
TSR3-202ENST00000566296 SMPD1P17405 629 aa19.48■□□□□ 0.71
TSR3-202ENST00000566296 NOVP48745 357 aa19.48■□□□□ 0.71
TSR3-202ENST00000566296 ITGA7Q13683 1181 aa19.48■□□□□ 0.71
TSR3-202ENST00000566296 GRIN2CQ14957 1233 aa19.48■□□□□ 0.71
TSR3-202ENST00000566296 ALX1Q15699 326 aa19.48■□□□□ 0.71
TSR3-202ENST00000566296 SYDE2Q5VT97 1194 aa19.48■□□□□ 0.71
TSR3-202ENST00000566296 IQSEC1Q6DN90 963 aa19.48■□□□□ 0.71
TSR3-202ENST00000566296 HIPK3Q9H422 1215 aa19.48■□□□□ 0.71
TSR3-202ENST00000566296 IL23AQ9NPF7 189 aa19.48■□□□□ 0.71
TSR3-202ENST00000566296 Q9Y3F1 56 aa19.48■□□□□ 0.71
TSR3-202ENST00000566296 CD4P01730 458 aa19.47■□□□□ 0.71
TSR3-202ENST00000566296 ACRP10323 421 aa19.47■□□□□ 0.71
TSR3-202ENST00000566296 CYP2C18P33260 490 aa19.47■□□□□ 0.71
TSR3-202ENST00000566296 PDE1AP54750 535 aa19.47■□□□□ 0.71
TSR3-202ENST00000566296 ZNF365Q70YC5 407 aa19.47■□□□□ 0.71
TSR3-202ENST00000566296 SLC43A3Q8NBI5 491 aa19.47■□□□□ 0.71
TSR3-202ENST00000566296 PDGFCQ9NRA1 345 aa19.47■□□□□ 0.71
TSR3-202ENST00000566296 PNMA2Q9UL42 364 aa19.47■□□□□ 0.71
TSR3-202ENST00000566296 DDX49Q9Y6V7 483 aaKnown RBP19.47■□□□□ 0.71
TSR3-202ENST00000566296 FGRP09769 529 aa19.46■□□□□ 0.71
TSR3-202ENST00000566296 SLC16A2P36021 539 aa19.46■□□□□ 0.71
TSR3-202ENST00000566296 MCMDC2Q4G0Z9 681 aa19.46■□□□□ 0.71
TSR3-202ENST00000566296 RASIP1Q5U651 963 aa19.46■□□□□ 0.71
TSR3-202ENST00000566296 TTBK2Q6IQ55 1244 aa19.46■□□□□ 0.71
TSR3-202ENST00000566296 TAPT1Q6NXT6 567 aa19.46■□□□□ 0.71
TSR3-202ENST00000566296 BTNL9Q6UXG8 535 aa19.46■□□□□ 0.71
TSR3-202ENST00000566296 KIAA1211Q6ZU35 1233 aa19.46■□□□□ 0.71
TSR3-202ENST00000566296 C16orf59Q7L2K0 433 aa19.46■□□□□ 0.71
TSR3-202ENST00000566296 GAS2L1Q99501 681 aaPredicted RBP19.46■□□□□ 0.71
TSR3-202ENST00000566296 PBX4Q9BYU1 374 aa19.46■□□□□ 0.71
TSR3-202ENST00000566296 ZMYM6O95789 1325 aa19.46■□□□□ 0.71
TSR3-202ENST00000566296 FRMPD2Q68DX3 1309 aaPredicted RBP19.46■□□□□ 0.71
TSR3-202ENST00000566296 LOC102724159A0A0B4J2E5 919 aa19.45■□□□□ 0.7
TSR3-202ENST00000566296 A0A0D9SFI3 127 aa19.45■□□□□ 0.7
TSR3-202ENST00000566296 PTPDC1A2A3K4 754 aa19.45■□□□□ 0.7
TSR3-202ENST00000566296 ALDH5A1P51649 535 aaPredicted RBP19.45■□□□□ 0.7
TSR3-202ENST00000566296 BAATQ14032 418 aaPredicted RBP19.45■□□□□ 0.7
TSR3-202ENST00000566296 PWP2Q15269 919 aaKnown RBP19.45■□□□□ 0.7
TSR3-202ENST00000566296 RAB30Q15771 203 aa19.45■□□□□ 0.7
TSR3-202ENST00000566296 TICAM2Q86XR7 235 aa19.45■□□□□ 0.7
TSR3-202ENST00000566296 MORC4Q8TE76 937 aa19.45■□□□□ 0.7
TSR3-202ENST00000566296 HERVK_113Q902F9 699 aa19.45■□□□□ 0.7
TSR3-202ENST00000566296 FAM227BQ96M60 508 aa19.45■□□□□ 0.7
TSR3-202ENST00000566296 CRBNQ96SW2 442 aa19.45■□□□□ 0.7
TSR3-202ENST00000566296 TMEM47Q9BQJ4 181 aa19.45■□□□□ 0.7
TSR3-202ENST00000566296 GPCPD1Q9NPB8 672 aa19.45■□□□□ 0.7
TSR3-202ENST00000566296 TCP11L1Q9NUJ3 509 aa19.45■□□□□ 0.7
TSR3-202ENST00000566296 TTC28Q96AY4 2481 aa19.44■□□□□ 0.7
TSR3-202ENST00000566296 GRXCR1A8MXD5 290 aa19.44■□□□□ 0.7
TSR3-202ENST00000566296 FGAP02671 866 aa19.44■□□□□ 0.7
TSR3-202ENST00000566296 PTGS1P23219 599 aa19.44■□□□□ 0.7
TSR3-202ENST00000566296 DUSP28Q4G0W2 176 aa19.44■□□□□ 0.7
TSR3-202ENST00000566296 PURBQ96QR8 312 aaKnown RBP19.44■□□□□ 0.7
TSR3-202ENST00000566296 MPHOSPH6Q99547 160 aaKnown RBP19.44■□□□□ 0.7
TSR3-202ENST00000566296 POLR3EQ9NVU0 708 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms