RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 GJA9P57773 515 aa21.57■■□□□ 1.04
USB1-213ENST00000566292 TTC14Q96N46 770 aa21.57■■□□□ 1.04
USB1-213ENST00000566292 RNF41Q9H4P4 317 aaPredicted RBP21.57■■□□□ 1.04
USB1-213ENST00000566292 LAMA2P24043 3122 aaKnown RBP21.57■■□□□ 1.04
USB1-213ENST00000566292 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.56■■□□□ 1.04
USB1-213ENST00000566292 ZNF213O14771 459 aa21.56■■□□□ 1.04
USB1-213ENST00000566292 CTAGE5O15320 804 aa21.56■■□□□ 1.04
USB1-213ENST00000566292 PQBP1O60828 265 aaKnown RBP21.56■■□□□ 1.04
USB1-213ENST00000566292 CLTBP09497 229 aa21.56■■□□□ 1.04
USB1-213ENST00000566292 C6orf222P0C671 652 aaPredicted RBP21.56■■□□□ 1.04
USB1-213ENST00000566292 SNHG28P0DPA3 235 aa21.56■■□□□ 1.04
USB1-213ENST00000566292 NSMFQ6X4W1 530 aa21.56■■□□□ 1.04
USB1-213ENST00000566292 DEFB123Q8N688 67 aa21.56■■□□□ 1.04
USB1-213ENST00000566292 PURBQ96QR8 312 aaKnown RBP21.56■■□□□ 1.04
USB1-213ENST00000566292 ZKSCAN3Q9BRR0 538 aa21.56■■□□□ 1.04
USB1-213ENST00000566292 STARD7Q9NQZ5 370 aa21.56■■□□□ 1.04
USB1-213ENST00000566292 ASB14A6NK59 587 aa21.55■■□□□ 1.04
USB1-213ENST00000566292 HIP1O00291 1037 aa21.55■■□□□ 1.04
USB1-213ENST00000566292 PDE4AP27815 886 aa21.55■■□□□ 1.04
USB1-213ENST00000566292 ZNF543Q08ER8 600 aa21.55■■□□□ 1.04
USB1-213ENST00000566292 ANKRD33Q7Z3H0 272 aa21.55■■□□□ 1.04
USB1-213ENST00000566292 NUP133Q8WUM0 1156 aa21.55■■□□□ 1.04
USB1-213ENST00000566292 ESR2Q92731 530 aa21.55■■□□□ 1.04
USB1-213ENST00000566292 COL6A3P12111 3177 aa21.55■■□□□ 1.04
USB1-213ENST00000566292 KIAA0355O15063 1070 aa21.54■■□□□ 1.04
USB1-213ENST00000566292 ASGR1P07306 291 aa21.54■■□□□ 1.04
USB1-213ENST00000566292 TNFAIP2Q03169 654 aa21.54■■□□□ 1.04
USB1-213ENST00000566292 SHHQ15465 462 aa21.54■■□□□ 1.04
USB1-213ENST00000566292 C9orf50Q5SZB4 431 aa21.54■■□□□ 1.04
USB1-213ENST00000566292 DSCC1Q9BVC3 393 aa21.54■■□□□ 1.04
USB1-213ENST00000566292 IL25Q9H293 177 aa21.54■■□□□ 1.04
USB1-213ENST00000566292 SPC25Q9HBM1 224 aa21.54■■□□□ 1.04
USB1-213ENST00000566292 NFIBO00712 420 aa21.53■■□□□ 1.04
USB1-213ENST00000566292 PTGS1P23219 599 aa21.53■■□□□ 1.04
USB1-213ENST00000566292 NKX3-2P78367 333 aa21.53■■□□□ 1.04
USB1-213ENST00000566292 FAAP100Q0VG06 881 aa21.53■■□□□ 1.04
USB1-213ENST00000566292 PCSK9Q8NBP7 692 aaKnown RBP21.53■■□□□ 1.04
USB1-213ENST00000566292 TOX2Q96NM4 488 aa21.53■■□□□ 1.04
USB1-213ENST00000566292 GNEQ9Y223 722 aaKnown RBP21.53■■□□□ 1.04
USB1-213ENST00000566292 MYH6P13533 1939 aa21.53■■□□□ 1.04
USB1-213ENST00000566292 ELP1O95163 1332 aa21.53■■□□□ 1.04
USB1-213ENST00000566292 KDM4AO75164 1064 aa21.52■■□□□ 1.04
USB1-213ENST00000566292 CDK7P50613 346 aa21.52■■□□□ 1.04
USB1-213ENST00000566292 BEX3Q00994 111 aa21.52■■□□□ 1.04
USB1-213ENST00000566292 BAATQ14032 418 aaPredicted RBP21.52■■□□□ 1.04
USB1-213ENST00000566292 GNASQ5JWF2 1037 aa21.52■■□□□ 1.04
USB1-213ENST00000566292 TAPT1Q6NXT6 567 aa21.52■■□□□ 1.04
USB1-213ENST00000566292 EEPD1Q7L9B9 569 aa21.52■■□□□ 1.04
USB1-213ENST00000566292 DGKHQ86XP1 1220 aa21.52■■□□□ 1.04
USB1-213ENST00000566292 FBXO16Q8IX29 292 aaPredicted RBP21.52■■□□□ 1.04
USB1-213ENST00000566292 MORC4Q8TE76 937 aa21.52■■□□□ 1.04
USB1-213ENST00000566292 CLEC4DQ8WXI8 215 aa21.52■■□□□ 1.04
USB1-213ENST00000566292 GLT1D1Q96MS3 346 aa21.52■■□□□ 1.04
USB1-213ENST00000566292 PDGFCQ9NRA1 345 aa21.52■■□□□ 1.04
USB1-213ENST00000566292 MTMR10Q9NXD2 777 aa21.52■■□□□ 1.04
USB1-213ENST00000566292 B4E1Z4 1266 aa21.51■■□□□ 1.03
USB1-213ENST00000566292 GSPT1P15170 499 aaKnown RBP21.51■■□□□ 1.03
USB1-213ENST00000566292 SMPD1P17405 629 aa21.51■■□□□ 1.03
USB1-213ENST00000566292 TMEM63BQ5T3F8 832 aa21.51■■□□□ 1.03
USB1-213ENST00000566292 TMEM39AQ9NV64 488 aa21.51■■□□□ 1.03
USB1-213ENST00000566292 DCDC2CA8MYV0 355 aa21.5■■□□□ 1.03
USB1-213ENST00000566292 GOLGA8HP0CJ92 632 aa21.5■■□□□ 1.03
USB1-213ENST00000566292 RAG1P15918 1043 aa21.5■■□□□ 1.03
USB1-213ENST00000566292 NT5C2P49902 561 aa21.5■■□□□ 1.03
USB1-213ENST00000566292 EPHB4P54760 987 aa21.5■■□□□ 1.03
USB1-213ENST00000566292 TTC22Q5TAA0 569 aa21.5■■□□□ 1.03
USB1-213ENST00000566292 SLC30A10Q6XR72 485 aa21.5■■□□□ 1.03
USB1-213ENST00000566292 NOL8Q76FK4 1167 aaKnown RBP21.5■■□□□ 1.03
USB1-213ENST00000566292 TLK2Q86UE8 772 aa21.5■■□□□ 1.03
USB1-213ENST00000566292 ANKS1AQ92625 1134 aa21.5■■□□□ 1.03
USB1-213ENST00000566292 CPVLQ9H3G5 476 aa21.5■■□□□ 1.03
USB1-213ENST00000566292 WDR19Q8NEZ3 1342 aa21.5■■□□□ 1.03
USB1-213ENST00000566292 PTPDC1A2A3K4 754 aa21.49■■□□□ 1.03
USB1-213ENST00000566292 ALDH5A1P51649 535 aaPredicted RBP21.49■■□□□ 1.03
USB1-213ENST00000566292 IRX6P78412 446 aaPredicted RBP21.49■■□□□ 1.03
USB1-213ENST00000566292 IMMTQ16891 758 aaKnown RBP21.49■■□□□ 1.03
USB1-213ENST00000566292 GPATCH4Q5T3I0 446 aaKnown RBP21.49■■□□□ 1.03
USB1-213ENST00000566292 IQSEC1Q6DN90 963 aa21.49■■□□□ 1.03
USB1-213ENST00000566292 IQCA1Q86XH1 822 aa21.49■■□□□ 1.03
USB1-213ENST00000566292 PNMA1Q8ND90 353 aa21.49■■□□□ 1.03
USB1-213ENST00000566292 VTI1AQ96AJ9 217 aa21.49■■□□□ 1.03
USB1-213ENST00000566292 VTA1Q9NP79 307 aa21.49■■□□□ 1.03
USB1-213ENST00000566292 ZSWIM5Q9P217 1185 aa21.49■■□□□ 1.03
USB1-213ENST00000566292 TBX21Q9UL17 535 aa21.49■■□□□ 1.03
USB1-213ENST00000566292 A0A0U1RQG5 324 aaPredicted RBP21.48■■□□□ 1.03
USB1-213ENST00000566292 ARVCFO00192 962 aa21.48■■□□□ 1.03
USB1-213ENST00000566292 CCDC178Q5BJE1 867 aa21.48■■□□□ 1.03
USB1-213ENST00000566292 ENAHQ8N8S7 591 aaPredicted RBP21.48■■□□□ 1.03
USB1-213ENST00000566292 ZSCAN10Q96SZ4 725 aaPredicted RBP21.48■■□□□ 1.03
USB1-213ENST00000566292 UBA5Q9GZZ9 404 aa21.48■■□□□ 1.03
USB1-213ENST00000566292 ADD3Q9UEY8 706 aaKnown RBP21.48■■□□□ 1.03
USB1-213ENST00000566292 CTNNA3Q9UI47 895 aa21.48■■□□□ 1.03
USB1-213ENST00000566292 MROH7Q68CQ1 1323 aa21.48■■□□□ 1.03
USB1-213ENST00000566292 DYNC1LI2O43237 492 aaPredicted RBP21.47■■□□□ 1.03
USB1-213ENST00000566292 FSCN1Q16658 493 aaKnown RBP21.47■■□□□ 1.03
USB1-213ENST00000566292 FAM109BQ6ICB4 259 aaPredicted RBP21.47■■□□□ 1.03
USB1-213ENST00000566292 CXCL17Q6UXB2 119 aa21.47■■□□□ 1.03
USB1-213ENST00000566292 RNF207Q6ZRF8 634 aa21.47■■□□□ 1.03
USB1-213ENST00000566292 KAT14Q9H8E8 782 aa21.47■■□□□ 1.03
USB1-213ENST00000566292 PNMA2Q9UL42 364 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms