RNA–Protein interactions for RNA: ENST00000566126.5

CLK3-217, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-217ENST00000566126 NOB1Q9ULX3 412 aaKnown RBP20.12■□□□□ 0.81
CLK3-217ENST00000566126 TRIP12Q14669 1992 aaPredicted RBP20.12■□□□□ 0.81
CLK3-217ENST00000566126 PTPRZ1P23471 2315 aaPredicted RBP20.11■□□□□ 0.81
CLK3-217ENST00000566126 KMT2EQ8IZD2 1858 aa20.11■□□□□ 0.81
CLK3-217ENST00000566126 WDR5P61964 334 aaKnown RBP20.11■□□□□ 0.81
CLK3-217ENST00000566126 ADHFE1Q8IWW8 467 aa20.11■□□□□ 0.81
CLK3-217ENST00000566126 CPXCR1Q8N123 301 aa20.11■□□□□ 0.81
CLK3-217ENST00000566126 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.11■□□□□ 0.81
CLK3-217ENST00000566126 TGS1Q96RS0 853 aaKnown RBP20.11■□□□□ 0.81
CLK3-217ENST00000566126 NUP88Q99567 741 aaPredicted RBP20.11■□□□□ 0.81
CLK3-217ENST00000566126 MRS2Q9HD23 443 aa20.11■□□□□ 0.81
CLK3-217ENST00000566126 GOPCQ9HD26 462 aa20.11■□□□□ 0.81
CLK3-217ENST00000566126 DCP1AQ9NPI6 582 aaPredicted RBP20.11■□□□□ 0.81
CLK3-217ENST00000566126 DMDP11532 3685 aa20.11■□□□□ 0.81
CLK3-217ENST00000566126 BAZ2AQ9UIF9 1905 aaKnown RBP20.1■□□□□ 0.81
CLK3-217ENST00000566126 MAGEB6P1A0A0J9YX57 407 aa20.1■□□□□ 0.81
CLK3-217ENST00000566126 LINC01553A4QN01 128 aa20.1■□□□□ 0.81
CLK3-217ENST00000566126 RAD21O60216 631 aa20.1■□□□□ 0.81
CLK3-217ENST00000566126 GNAI3P08754 354 aa20.1■□□□□ 0.81
CLK3-217ENST00000566126 KCNJ6P48051 423 aa20.1■□□□□ 0.81
CLK3-217ENST00000566126 HERC4Q5GLZ8 1057 aaPredicted RBP20.1■□□□□ 0.81
CLK3-217ENST00000566126 SDR42E1Q8WUS8 393 aa20.1■□□□□ 0.81
CLK3-217ENST00000566126 ALG13Q9NP73 1137 aaKnown RBP20.1■□□□□ 0.81
CLK3-217ENST00000566126 PDGFCQ9NRA1 345 aa20.1■□□□□ 0.81
CLK3-217ENST00000566126 TLR7Q9NYK1 1049 aaKnown RBP20.1■□□□□ 0.81
CLK3-217ENST00000566126 MUTYHQ9UIF7 546 aa20.1■□□□□ 0.81
CLK3-217ENST00000566126 DBNLQ9UJU6 430 aaKnown RBP20.1■□□□□ 0.81
CLK3-217ENST00000566126 DDX49Q9Y6V7 483 aaKnown RBP20.1■□□□□ 0.81
CLK3-217ENST00000566126 SCN10AQ9Y5Y9 1956 aa20.09■□□□□ 0.81
CLK3-217ENST00000566126 PITPNM1O00562 1244 aa20.09■□□□□ 0.81
CLK3-217ENST00000566126 DEFB103AP81534 67 aa20.09■□□□□ 0.81
CLK3-217ENST00000566126 TMED8Q6PL24 325 aaPredicted RBP20.09■□□□□ 0.81
CLK3-217ENST00000566126 BMP8AQ7Z5Y6 402 aa20.09■□□□□ 0.81
CLK3-217ENST00000566126 FAM133AQ8N9E0 248 aa20.09■□□□□ 0.81
CLK3-217ENST00000566126 CCDC17Q96LX7 622 aa20.09■□□□□ 0.81
CLK3-217ENST00000566126 ZBED2Q9BTP6 218 aa20.09■□□□□ 0.81
CLK3-217ENST00000566126 UPF3BQ9BZI7 483 aaKnown RBP20.09■□□□□ 0.81
CLK3-217ENST00000566126 CRNKL1Q9BZJ0 848 aaKnown RBP20.09■□□□□ 0.81
CLK3-217ENST00000566126 RAVER2Q9HCJ3 691 aaKnown RBP20.09■□□□□ 0.81
CLK3-217ENST00000566126 FAM86C1Q9NVL1 165 aa20.09■□□□□ 0.81
CLK3-217ENST00000566126 PLXNA3P51805 1871 aa20.08■□□□□ 0.81
CLK3-217ENST00000566126 TAPT1Q6NXT6 567 aa20.08■□□□□ 0.81
CLK3-217ENST00000566126 API5Q9BZZ5 524 aaKnown RBP20.08■□□□□ 0.81
CLK3-217ENST00000566126 Q9Y3F1 56 aa20.08■□□□□ 0.81
CLK3-217ENST00000566126 SOWAHBA6NEL2 793 aa20.07■□□□□ 0.8
CLK3-217ENST00000566126 GPNMBQ14956 572 aa20.07■□□□□ 0.8
CLK3-217ENST00000566126 PRPF38AQ8NAV1 312 aaKnown RBP20.07■□□□□ 0.8
CLK3-217ENST00000566126 RETREG2Q8NC44 543 aa20.07■□□□□ 0.8
CLK3-217ENST00000566126 CHST13Q8NET6 341 aa20.07■□□□□ 0.8
CLK3-217ENST00000566126 RAD9AQ99638 391 aa20.07■□□□□ 0.8
CLK3-217ENST00000566126 PRRX2Q99811 253 aa20.07■□□□□ 0.8
CLK3-217ENST00000566126 KANSL2Q9H9L4 492 aa20.07■□□□□ 0.8
CLK3-217ENST00000566126 FBXO40Q9UH90 709 aa20.07■□□□□ 0.8
CLK3-217ENST00000566126 GREB1LQ9C091 1923 aaPredicted RBP20.06■□□□□ 0.8
CLK3-217ENST00000566126 GJB5O95377 273 aa20.06■□□□□ 0.8
CLK3-217ENST00000566126 CDK8P49336 464 aa20.06■□□□□ 0.8
CLK3-217ENST00000566126 PURAQ00577 322 aaKnown RBP20.06■□□□□ 0.8
CLK3-217ENST00000566126 COL19A1Q14993 1142 aa20.06■□□□□ 0.8
CLK3-217ENST00000566126 IQSEC1Q6DN90 963 aa20.06■□□□□ 0.8
CLK3-217ENST00000566126 PPP1R13LQ8WUF5 828 aa20.06■□□□□ 0.8
CLK3-217ENST00000566126 EDAQ92838 391 aa20.06■□□□□ 0.8
CLK3-217ENST00000566126 PABPC5Q96DU9 382 aaKnown RBP20.06■□□□□ 0.8
CLK3-217ENST00000566126 SLC38A10Q9HBR0 1119 aa20.06■□□□□ 0.8
CLK3-217ENST00000566126 FAM50BQ9Y247 325 aa20.06■□□□□ 0.8
CLK3-217ENST00000566126 ZBED4O75132 1171 aa20.05■□□□□ 0.8
CLK3-217ENST00000566126 FBXO16Q8IX29 292 aaPredicted RBP20.05■□□□□ 0.8
CLK3-217ENST00000566126 MRPL38Q96DV4 380 aaKnown RBP20.05■□□□□ 0.8
CLK3-217ENST00000566126 C17orf80Q9BSJ5 609 aa20.05■□□□□ 0.8
CLK3-217ENST00000566126 CCDC8Q9H0W5 538 aaPredicted RBP20.05■□□□□ 0.8
CLK3-217ENST00000566126 ASB14A6NK59 587 aa20.04■□□□□ 0.8
CLK3-217ENST00000566126 EEPD1Q7L9B9 569 aa20.04■□□□□ 0.8
CLK3-217ENST00000566126 RNF135Q8IUD6 432 aa20.04■□□□□ 0.8
CLK3-217ENST00000566126 LCORLQ8N3X6 602 aa20.04■□□□□ 0.8
CLK3-217ENST00000566126 FBXO22Q8NEZ5 403 aa20.04■□□□□ 0.8
CLK3-217ENST00000566126 PBXIP1Q96AQ6 731 aa20.04■□□□□ 0.8
CLK3-217ENST00000566126 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.04■□□□□ 0.8
CLK3-217ENST00000566126 RIF1Q5UIP0 2472 aaKnown RBP20.04■□□□□ 0.8
CLK3-217ENST00000566126 MYO7AQ13402 2215 aa20.03■□□□□ 0.8
CLK3-217ENST00000566126 CYP2D7A0A087X1C5 515 aa20.03■□□□□ 0.8
CLK3-217ENST00000566126 RBAK-RBAKDNI3L0D1 243 aa20.03■□□□□ 0.8
CLK3-217ENST00000566126 TCTN1Q2MV58 587 aa20.03■□□□□ 0.8
CLK3-217ENST00000566126 NBPF20Q3BBV1 942 aa20.03■□□□□ 0.8
CLK3-217ENST00000566126 HOMER2Q9NSB8 354 aa20.03■□□□□ 0.8
CLK3-217ENST00000566126 POLR3EQ9NVU0 708 aa20.03■□□□□ 0.8
CLK3-217ENST00000566126 LCTP09848 1927 aa20.03■□□□□ 0.8
CLK3-217ENST00000566126 TMEM221A6NGB7 291 aa20.02■□□□□ 0.8
CLK3-217ENST00000566126 M0R296 226 aa20.02■□□□□ 0.8
CLK3-217ENST00000566126 NDUFB10O96000 172 aa20.02■□□□□ 0.8
CLK3-217ENST00000566126 PDE6AP16499 860 aa20.02■□□□□ 0.8
CLK3-217ENST00000566126 BFSP2Q13515 415 aa20.02■□□□□ 0.8
CLK3-217ENST00000566126 TCEAL5Q5H9L2 206 aa20.02■□□□□ 0.8
CLK3-217ENST00000566126 FAM47CQ5HY64 1035 aa20.02■□□□□ 0.8
CLK3-217ENST00000566126 EP400NLQ6ZTU2 488 aa20.02■□□□□ 0.8
CLK3-217ENST00000566126 C16orf86Q6ZW13 317 aa20.02■□□□□ 0.8
CLK3-217ENST00000566126 ERMP1Q7Z2K6 904 aa20.02■□□□□ 0.8
CLK3-217ENST00000566126 KIFC2Q96AC6 838 aa20.02■□□□□ 0.8
CLK3-217ENST00000566126 A1CFQ9NQ94 594 aaKnown RBP20.02■□□□□ 0.8
CLK3-217ENST00000566126 ATG2AQ2TAZ0 1938 aa20.02■□□□□ 0.79
CLK3-217ENST00000566126 FAM186AA6NE01 2351 aa20.01■□□□□ 0.79
CLK3-217ENST00000566126 E9PSI1 815 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms