RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 CTDP1Q9Y5B0 961 aaPredicted RBP14.57□□□□□ -0.08
SF3B3-206ENST00000565990 PCDHA1Q9Y5I3 950 aa14.57□□□□□ -0.08
SF3B3-206ENST00000565990 ABCB11O95342 1321 aa14.57□□□□□ -0.08
SF3B3-206ENST00000565990 hCG_1642624A0A1W2PR95 340 aa14.56□□□□□ -0.08
SF3B3-206ENST00000565990 hCG_1984214I3L0E3 225 aa14.56□□□□□ -0.08
SF3B3-206ENST00000565990 DEXIO95424 95 aa14.56□□□□□ -0.08
SF3B3-206ENST00000565990 SCG2P13521 617 aa14.56□□□□□ -0.08
SF3B3-206ENST00000565990 CTGFP29279 349 aa14.56□□□□□ -0.08
SF3B3-206ENST00000565990 MAPK4P31152 587 aa14.56□□□□□ -0.08
SF3B3-206ENST00000565990 GHRHRQ02643 423 aa14.56□□□□□ -0.08
SF3B3-206ENST00000565990 PLS1Q14651 629 aa14.56□□□□□ -0.08
SF3B3-206ENST00000565990 HOMER1Q86YM7 354 aa14.56□□□□□ -0.08
SF3B3-206ENST00000565990 ABRAQ8N0Z2 381 aa14.56□□□□□ -0.08
SF3B3-206ENST00000565990 FAM177A1Q8N128 213 aaPredicted RBP14.56□□□□□ -0.08
SF3B3-206ENST00000565990 SAMD3Q8N6K7 520 aa14.56□□□□□ -0.08
SF3B3-206ENST00000565990 ZNF713Q8N859 430 aaPredicted RBP14.56□□□□□ -0.08
SF3B3-206ENST00000565990 INTS4Q96HW7 963 aaKnown RBP14.56□□□□□ -0.08
SF3B3-206ENST00000565990 TRERF1Q96PN7 1200 aa14.56□□□□□ -0.08
SF3B3-206ENST00000565990 EFCC1Q9HA90 598 aa14.56□□□□□ -0.08
SF3B3-206ENST00000565990 SH3GLB2Q9NR46 395 aa14.56□□□□□ -0.08
SF3B3-206ENST00000565990 SEC63Q9UGP8 760 aaKnown RBP14.56□□□□□ -0.08
SF3B3-206ENST00000565990 FBXO40Q9UH90 709 aa14.56□□□□□ -0.08
SF3B3-206ENST00000565990 CCPG1Q9ULG6 757 aa14.56□□□□□ -0.08
SF3B3-206ENST00000565990 PLXNB2O15031 1838 aa14.56□□□□□ -0.08
SF3B3-206ENST00000565990 OPLAHO14841 1288 aa14.55□□□□□ -0.08
SF3B3-206ENST00000565990 FKTNO75072 461 aa14.55□□□□□ -0.08
SF3B3-206ENST00000565990 ALAS1P13196 640 aa14.55□□□□□ -0.08
SF3B3-206ENST00000565990 CAP1Q01518 475 aa14.55□□□□□ -0.08
SF3B3-206ENST00000565990 AKAP17AQ02040 695 aaKnown RBP14.55□□□□□ -0.08
SF3B3-206ENST00000565990 SKOR2Q2VWA4 1001 aaPredicted RBP14.55□□□□□ -0.08
SF3B3-206ENST00000565990 MUM1L1Q5H9M0 696 aa14.55□□□□□ -0.08
SF3B3-206ENST00000565990 TEX2Q8IWB9 1127 aa14.55□□□□□ -0.08
SF3B3-206ENST00000565990 ZNF296Q8WUU4 475 aaPredicted RBP14.55□□□□□ -0.08
SF3B3-206ENST00000565990 COA7Q96BR5 231 aa14.55□□□□□ -0.08
SF3B3-206ENST00000565990 BARHL2Q9NY43 387 aa14.55□□□□□ -0.08
SF3B3-206ENST00000565990 MAP3K20Q9NYL2 800 aaKnown RBP14.55□□□□□ -0.08
SF3B3-206ENST00000565990 ORC3Q9UBD5 711 aaPredicted RBP14.55□□□□□ -0.08
SF3B3-206ENST00000565990 GJD2Q9UKL4 321 aa14.55□□□□□ -0.08
SF3B3-206ENST00000565990 MRPL11Q9Y3B7 192 aaKnown RBP14.55□□□□□ -0.08
SF3B3-206ENST00000565990 CASP8AP2Q9UKL3 1982 aa14.54□□□□□ -0.08
SF3B3-206ENST00000565990 PTPDC1A2A3K4 754 aa14.54□□□□□ -0.08
SF3B3-206ENST00000565990 STXBP3O00186 592 aa14.54□□□□□ -0.08
SF3B3-206ENST00000565990 FOXN1O15353 648 aa14.54□□□□□ -0.08
SF3B3-206ENST00000565990 JAK2O60674 1132 aa14.54□□□□□ -0.08
SF3B3-206ENST00000565990 GNRH1P01148 92 aa14.54□□□□□ -0.08
SF3B3-206ENST00000565990 HSPA8P11142 646 aaKnown RBP14.54□□□□□ -0.08
SF3B3-206ENST00000565990 PSMC4P43686 418 aa14.54□□□□□ -0.08
SF3B3-206ENST00000565990 MORN1Q5T089 497 aa14.54□□□□□ -0.08
SF3B3-206ENST00000565990 WWC2Q6AWC2 1192 aa14.54□□□□□ -0.08
SF3B3-206ENST00000565990 TYW1BQ6NUM6 668 aa14.54□□□□□ -0.08
SF3B3-206ENST00000565990 CLEC17AQ6ZS10 378 aa14.54□□□□□ -0.08
SF3B3-206ENST00000565990 GPR142Q7Z601 462 aa14.54□□□□□ -0.08
SF3B3-206ENST00000565990 PLEKHH3Q7Z736 793 aa14.54□□□□□ -0.08
SF3B3-206ENST00000565990 NCAPG2Q86XI2 1143 aa14.54□□□□□ -0.08
SF3B3-206ENST00000565990 PIBF1Q8WXW3 757 aa14.54□□□□□ -0.08
SF3B3-206ENST00000565990 USP6NLQ92738 828 aa14.54□□□□□ -0.08
SF3B3-206ENST00000565990 SHISA4Q96DD7 197 aa14.54□□□□□ -0.08
SF3B3-206ENST00000565990 GBP4Q96PP9 640 aa14.54□□□□□ -0.08
SF3B3-206ENST00000565990 ACAD9Q9H845 621 aa14.54□□□□□ -0.08
SF3B3-206ENST00000565990 RNF146Q9NTX7 359 aa14.54□□□□□ -0.08
SF3B3-206ENST00000565990 TSKSQ9UJT2 592 aa14.54□□□□□ -0.08
SF3B3-206ENST00000565990 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.54□□□□□ -0.08
SF3B3-206ENST00000565990 SLC15A5A6NIM6 579 aa14.53□□□□□ -0.08
SF3B3-206ENST00000565990 PPFIA3O75145 1194 aa14.53□□□□□ -0.08
SF3B3-206ENST00000565990 HSPA1AP0DMV8 641 aaKnown RBP14.53□□□□□ -0.08
SF3B3-206ENST00000565990 HSPA1BP0DMV9 641 aaKnown RBP14.53□□□□□ -0.08
SF3B3-206ENST00000565990 PTPREP23469 700 aa14.53□□□□□ -0.08
SF3B3-206ENST00000565990 FCGRTP55899 365 aa14.53□□□□□ -0.08
SF3B3-206ENST00000565990 HMGN5P82970 282 aaKnown RBP14.53□□□□□ -0.08
SF3B3-206ENST00000565990 KIF22Q14807 665 aa14.53□□□□□ -0.08
SF3B3-206ENST00000565990 USH1GQ495M9 461 aa14.53□□□□□ -0.08
SF3B3-206ENST00000565990 MCF2L2Q86YR7 1114 aa14.53□□□□□ -0.08
SF3B3-206ENST00000565990 WASF1Q92558 559 aa14.53□□□□□ -0.08
SF3B3-206ENST00000565990 TBC1D5Q92609 795 aa14.53□□□□□ -0.08
SF3B3-206ENST00000565990 ERO1AQ96HE7 468 aa14.53□□□□□ -0.08
SF3B3-206ENST00000565990 ARHGAP39Q9C0H5 1083 aa14.53□□□□□ -0.08
SF3B3-206ENST00000565990 PLXNA1Q9UIW2 1896 aa14.52□□□□□ -0.08
SF3B3-206ENST00000565990 ZSWIM8A7E2V4 1837 aa14.52□□□□□ -0.08
SF3B3-206ENST00000565990 ZNF236Q9UL36 1845 aa14.52□□□□□ -0.08
SF3B3-206ENST00000565990 DNAJC25-GNG10A0A024R161 153 aa14.52□□□□□ -0.09
SF3B3-206ENST00000565990 ESYT2A0FGR8 921 aa14.52□□□□□ -0.09
SF3B3-206ENST00000565990 PIK3CDO00329 1044 aa14.52□□□□□ -0.09
SF3B3-206ENST00000565990 NFIBO00712 420 aa14.52□□□□□ -0.09
SF3B3-206ENST00000565990 DTNBO60941 627 aa14.52□□□□□ -0.09
SF3B3-206ENST00000565990 FCER1AP12319 257 aa14.52□□□□□ -0.09
SF3B3-206ENST00000565990 TAL1P17542 331 aaPredicted RBP14.52□□□□□ -0.09
SF3B3-206ENST00000565990 CTCFP49711 727 aaPredicted RBP14.52□□□□□ -0.09
SF3B3-206ENST00000565990 HSD17B4P51659 736 aa14.52□□□□□ -0.09
SF3B3-206ENST00000565990 GRB14Q14449 540 aa14.52□□□□□ -0.09
SF3B3-206ENST00000565990 ARHGEF6Q15052 776 aa14.52□□□□□ -0.09
SF3B3-206ENST00000565990 PPP1R18Q6NYC8 613 aa14.52□□□□□ -0.09
SF3B3-206ENST00000565990 HEATR3Q7Z4Q2 680 aa14.52□□□□□ -0.09
SF3B3-206ENST00000565990 GPKOWQ92917 476 aaPredicted RBP eCLIP14.52□□□□□ -0.09
SF3B3-206ENST00000565990 DDX11Q96FC9 970 aa14.52□□□□□ -0.09
SF3B3-206ENST00000565990 TRIM47Q96LD4 638 aa14.52□□□□□ -0.09
SF3B3-206ENST00000565990 AIFM3Q96NN9 605 aa14.52□□□□□ -0.09
SF3B3-206ENST00000565990 ZMYND12Q9H0C1 365 aa14.52□□□□□ -0.09
SF3B3-206ENST00000565990 CYP39A1Q9NYL5 469 aa14.52□□□□□ -0.09
SF3B3-206ENST00000565990 LCTP09848 1927 aa14.51□□□□□ -0.09
SF3B3-206ENST00000565990 FSD2A1L4K1 749 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms