RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 TROAPQ12815 778 aa16.11■□□□□ 0.17
HERPUD1-210ENST00000565966 GRM4Q14833 912 aa16.11■□□□□ 0.17
HERPUD1-210ENST00000565966 PRAMEF19Q5SWL8 479 aa16.11■□□□□ 0.17
HERPUD1-210ENST00000565966 UBE2Q1Q7Z7E8 422 aa16.11■□□□□ 0.17
HERPUD1-210ENST00000565966 TCEANC2Q96MN5 208 aa16.11■□□□□ 0.17
HERPUD1-210ENST00000565966 JAKMIP1Q96N16 626 aaKnown RBP16.11■□□□□ 0.17
HERPUD1-210ENST00000565966 DDX20Q9UHI6 824 aaKnown RBP16.11■□□□□ 0.17
HERPUD1-210ENST00000565966 SYNGAP1Q96PV0 1343 aa16.11■□□□□ 0.17
HERPUD1-210ENST00000565966 SEPT4O43236 478 aa16.1■□□□□ 0.17
HERPUD1-210ENST00000565966 DHX16O60231 1041 aaKnown RBP16.1■□□□□ 0.17
HERPUD1-210ENST00000565966 SEC24BO95487 1268 aa16.1■□□□□ 0.17
HERPUD1-210ENST00000565966 CPA1P15085 419 aa16.1■□□□□ 0.17
HERPUD1-210ENST00000565966 CDC37Q16543 378 aaPredicted RBP16.1■□□□□ 0.17
HERPUD1-210ENST00000565966 ZNF654Q8IZM8 581 aa16.1■□□□□ 0.17
HERPUD1-210ENST00000565966 FAM133AQ8N9E0 248 aa16.1■□□□□ 0.17
HERPUD1-210ENST00000565966 JMJD4Q9H9V9 463 aa16.1■□□□□ 0.17
HERPUD1-210ENST00000565966 VAT1LQ9HCJ6 419 aa16.1■□□□□ 0.17
HERPUD1-210ENST00000565966 CYP39A1Q9NYL5 469 aa16.1■□□□□ 0.17
HERPUD1-210ENST00000565966 DDAH1O94760 285 aa16.09■□□□□ 0.17
HERPUD1-210ENST00000565966 TAL1P17542 331 aaPredicted RBP16.09■□□□□ 0.17
HERPUD1-210ENST00000565966 CNTN2Q02246 1040 aa16.09■□□□□ 0.17
HERPUD1-210ENST00000565966 C8orf34Q49A92 452 aa16.09■□□□□ 0.17
HERPUD1-210ENST00000565966 BLOC1S2Q6QNY1 142 aa16.09■□□□□ 0.17
HERPUD1-210ENST00000565966 NSMFQ6X4W1 530 aa16.09■□□□□ 0.17
HERPUD1-210ENST00000565966 NFXL1Q6ZNB6 911 aa16.09■□□□□ 0.17
HERPUD1-210ENST00000565966 FGD4Q96M96 766 aa16.09■□□□□ 0.17
HERPUD1-210ENST00000565966 MAP3K14Q99558 947 aa16.09■□□□□ 0.17
HERPUD1-210ENST00000565966 CNPY2Q9Y2B0 182 aa16.09■□□□□ 0.17
HERPUD1-210ENST00000565966 CCDC69A6NI79 296 aa16.08■□□□□ 0.16
HERPUD1-210ENST00000565966 NFIBO00712 420 aa16.08■□□□□ 0.16
HERPUD1-210ENST00000565966 EIF5BO60841 1220 aaKnown RBP16.08■□□□□ 0.16
HERPUD1-210ENST00000565966 SNAI1O95863 264 aaPredicted RBP16.08■□□□□ 0.16
HERPUD1-210ENST00000565966 PSMA5P28066 241 aa16.08■□□□□ 0.16
HERPUD1-210ENST00000565966 QRICH1Q2TAL8 776 aa16.08■□□□□ 0.16
HERPUD1-210ENST00000565966 NECAB2Q7Z6G3 386 aa16.08■□□□□ 0.16
HERPUD1-210ENST00000565966 SGMS1Q86VZ5 419 aa16.08■□□□□ 0.16
HERPUD1-210ENST00000565966 NUP133Q8WUM0 1156 aa16.08■□□□□ 0.16
HERPUD1-210ENST00000565966 CLEC4DQ8WXI8 215 aa16.08■□□□□ 0.16
HERPUD1-210ENST00000565966 PAWRQ96IZ0 340 aaKnown RBP16.08■□□□□ 0.16
HERPUD1-210ENST00000565966 MYL10Q9BUA6 226 aa16.08■□□□□ 0.16
HERPUD1-210ENST00000565966 ALPK3Q96L96 1907 aa16.07■□□□□ 0.16
HERPUD1-210ENST00000565966 PTPDC1A2A3K4 754 aa16.07■□□□□ 0.16
HERPUD1-210ENST00000565966 SOWAHBA6NEL2 793 aa16.07■□□□□ 0.16
HERPUD1-210ENST00000565966 ASB14A6NK59 587 aa16.07■□□□□ 0.16
HERPUD1-210ENST00000565966 ZNF865P0CJ78 1059 aaPredicted RBP16.07■□□□□ 0.16
HERPUD1-210ENST00000565966 CASTP20810 708 aaKnown RBP16.07■□□□□ 0.16
HERPUD1-210ENST00000565966 RPS6KB1P23443 525 aa16.07■□□□□ 0.16
HERPUD1-210ENST00000565966 MNX1P50219 401 aaPredicted RBP16.07■□□□□ 0.16
HERPUD1-210ENST00000565966 BAATQ14032 418 aaPredicted RBP16.07■□□□□ 0.16
HERPUD1-210ENST00000565966 SLC35G1Q2M3R5 365 aa16.07■□□□□ 0.16
HERPUD1-210ENST00000565966 USH1GQ495M9 461 aa16.07■□□□□ 0.16
HERPUD1-210ENST00000565966 RNF207Q6ZRF8 634 aa16.07■□□□□ 0.16
HERPUD1-210ENST00000565966 ARMCX2Q7L311 632 aa16.07■□□□□ 0.16
HERPUD1-210ENST00000565966 FBXO11Q86XK2 927 aa16.07■□□□□ 0.16
HERPUD1-210ENST00000565966 CCDC144CPQ8IYA2 1237 aa16.07■□□□□ 0.16
HERPUD1-210ENST00000565966 RGS22Q8NE09 1264 aa16.07■□□□□ 0.16
HERPUD1-210ENST00000565966 CTCFLQ8NI51 663 aaPredicted RBP16.07■□□□□ 0.16
HERPUD1-210ENST00000565966 MTMR8Q96EF0 704 aa16.07■□□□□ 0.16
HERPUD1-210ENST00000565966 HTATIP2Q9BUP3 242 aa16.07■□□□□ 0.16
HERPUD1-210ENST00000565966 MAF1Q9H063 256 aa16.07■□□□□ 0.16
HERPUD1-210ENST00000565966 ABHD16BQ9H3Z7 469 aa16.07■□□□□ 0.16
HERPUD1-210ENST00000565966 RIOX1Q9H6W3 641 aa16.07■□□□□ 0.16
HERPUD1-210ENST00000565966 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.07■□□□□ 0.16
HERPUD1-210ENST00000565966 ABCB11O95342 1321 aa16.07■□□□□ 0.16
HERPUD1-210ENST00000565966 ZBTB5O15062 677 aa16.06■□□□□ 0.16
HERPUD1-210ENST00000565966 CALM1P0DP23 149 aa16.06■□□□□ 0.16
HERPUD1-210ENST00000565966 CALM2P0DP24 149 aa16.06■□□□□ 0.16
HERPUD1-210ENST00000565966 CALM3P0DP25 149 aa16.06■□□□□ 0.16
HERPUD1-210ENST00000565966 AKR1A1P14550 325 aa16.06■□□□□ 0.16
HERPUD1-210ENST00000565966 KIF5BP33176 963 aa16.06■□□□□ 0.16
HERPUD1-210ENST00000565966 ACVR2BQ13705 512 aa16.06■□□□□ 0.16
HERPUD1-210ENST00000565966 ARRDC4Q8NCT1 418 aa16.06■□□□□ 0.16
HERPUD1-210ENST00000565966 DIS3LQ8TF46 1054 aaKnown RBP16.06■□□□□ 0.16
HERPUD1-210ENST00000565966 AMNQ9BXJ7 453 aa16.06■□□□□ 0.16
HERPUD1-210ENST00000565966 TM6SF1Q9BZW5 370 aa16.06■□□□□ 0.16
HERPUD1-210ENST00000565966 ZSWIM6Q9HCJ5 1215 aa16.06■□□□□ 0.16
HERPUD1-210ENST00000565966 ADD3Q9UEY8 706 aaKnown RBP16.06■□□□□ 0.16
HERPUD1-210ENST00000565966 BRPF3Q9ULD4 1205 aa16.06■□□□□ 0.16
HERPUD1-210ENST00000565966 MRPL11Q9Y3B7 192 aaKnown RBP16.06■□□□□ 0.16
HERPUD1-210ENST00000565966 SLC12A7Q9Y666 1083 aa16.06■□□□□ 0.16
HERPUD1-210ENST00000565966 LOC102724159A0A0B4J2E5 919 aa16.05■□□□□ 0.16
HERPUD1-210ENST00000565966 RARBP10826 455 aa16.05■□□□□ 0.16
HERPUD1-210ENST00000565966 RXRAP19793 462 aa16.05■□□□□ 0.16
HERPUD1-210ENST00000565966 SMARCA1P28370 1054 aa16.05■□□□□ 0.16
HERPUD1-210ENST00000565966 GNAQP50148 359 aa16.05■□□□□ 0.16
HERPUD1-210ENST00000565966 RPS6P62753 249 aaKnown RBP16.05■□□□□ 0.16
HERPUD1-210ENST00000565966 TRAF1Q13077 416 aa16.05■□□□□ 0.16
HERPUD1-210ENST00000565966 PWP2Q15269 919 aaKnown RBP16.05■□□□□ 0.16
HERPUD1-210ENST00000565966 ANO1Q5XXA6 986 aa16.05■□□□□ 0.16
HERPUD1-210ENST00000565966 APOA5Q6Q788 366 aa16.05■□□□□ 0.16
HERPUD1-210ENST00000565966 Q6ZUG5 572 aa16.05■□□□□ 0.16
HERPUD1-210ENST00000565966 RUFY3Q7L099 469 aa16.05■□□□□ 0.16
HERPUD1-210ENST00000565966 RAB11FIP4Q86YS3 637 aa16.05■□□□□ 0.16
HERPUD1-210ENST00000565966 DPF3Q92784 378 aa16.05■□□□□ 0.16
HERPUD1-210ENST00000565966 C11orf49Q9H6J7 331 aa16.05■□□□□ 0.16
HERPUD1-210ENST00000565966 ZHX1Q9UKY1 873 aaPredicted RBP16.05■□□□□ 0.16
HERPUD1-210ENST00000565966 FAM184BQ9ULE4 1060 aa16.05■□□□□ 0.16
HERPUD1-210ENST00000565966 CEP290O15078 2479 aa16.05■□□□□ 0.16
HERPUD1-210ENST00000565966 CYTH3O43739 400 aa16.04■□□□□ 0.16
HERPUD1-210ENST00000565966 CALML3P27482 149 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms