RNA–Protein interactions for RNA: ENST00000565646.5

CFDP1-205, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-205ENST00000565646 CPA4Q9UI42 421 aa14.75□□□□□ -0.05
CFDP1-205ENST00000565646 RIPK3Q9Y572 518 aa14.75□□□□□ -0.05
CFDP1-205ENST00000565646 HTTP42858 3142 aa14.74□□□□□ -0.05
CFDP1-205ENST00000565646 CDKL5O76039 1030 aa14.74□□□□□ -0.05
CFDP1-205ENST00000565646 OAZ1P54368 228 aa14.74□□□□□ -0.05
CFDP1-205ENST00000565646 ERVK-9P63128 1117 aa14.74□□□□□ -0.05
CFDP1-205ENST00000565646 ERVK-24P63145 666 aa14.74□□□□□ -0.05
CFDP1-205ENST00000565646 PFKFB3Q16875 520 aaPredicted RBP14.74□□□□□ -0.05
CFDP1-205ENST00000565646 CPXCR1Q8N123 301 aa14.74□□□□□ -0.05
CFDP1-205ENST00000565646 DDX11Q96FC9 970 aa14.74□□□□□ -0.05
CFDP1-205ENST00000565646 SPATC1LQ9H0A9 340 aa14.74□□□□□ -0.05
CFDP1-205ENST00000565646 PLXNB2O15031 1838 aa14.73□□□□□ -0.05
CFDP1-205ENST00000565646 LCTP09848 1927 aa14.73□□□□□ -0.05
CFDP1-205ENST00000565646 SCG2P13521 617 aa14.73□□□□□ -0.05
CFDP1-205ENST00000565646 STAT3P40763 770 aa14.73□□□□□ -0.05
CFDP1-205ENST00000565646 CAP1Q01518 475 aa14.73□□□□□ -0.05
CFDP1-205ENST00000565646 ARHGEF6Q15052 776 aa14.73□□□□□ -0.05
CFDP1-205ENST00000565646 FAM110CQ1W6H9 321 aa14.73□□□□□ -0.05
CFDP1-205ENST00000565646 WWC2Q6AWC2 1192 aa14.73□□□□□ -0.05
CFDP1-205ENST00000565646 TYW1BQ6NUM6 668 aa14.73□□□□□ -0.05
CFDP1-205ENST00000565646 FBXO11Q86XK2 927 aa14.73□□□□□ -0.05
CFDP1-205ENST00000565646 TRIM22Q8IYM9 498 aa14.73□□□□□ -0.05
CFDP1-205ENST00000565646 GPKOWQ92917 476 aaPredicted RBP eCLIP14.73□□□□□ -0.05
CFDP1-205ENST00000565646 COA7Q96BR5 231 aa14.73□□□□□ -0.05
CFDP1-205ENST00000565646 INTS4Q96HW7 963 aaKnown RBP14.73□□□□□ -0.05
CFDP1-205ENST00000565646 MOV10L1Q9BXT6 1211 aaKnown RBP14.73□□□□□ -0.05
CFDP1-205ENST00000565646 STXBP3O00186 592 aa14.72□□□□□ -0.05
CFDP1-205ENST00000565646 OPLAHO14841 1288 aa14.72□□□□□ -0.05
CFDP1-205ENST00000565646 DEXIO95424 95 aa14.72□□□□□ -0.05
CFDP1-205ENST00000565646 USH1GQ495M9 461 aa14.72□□□□□ -0.05
CFDP1-205ENST00000565646 MUM1L1Q5H9M0 696 aa14.72□□□□□ -0.05
CFDP1-205ENST00000565646 SNRNP48Q6IEG0 339 aaKnown RBP14.72□□□□□ -0.05
CFDP1-205ENST00000565646 RIOX2Q8IUF8 465 aa14.72□□□□□ -0.05
CFDP1-205ENST00000565646 GPRC5AQ8NFJ5 357 aa14.72□□□□□ -0.05
CFDP1-205ENST00000565646 CLEC4DQ8WXI8 215 aa14.72□□□□□ -0.05
CFDP1-205ENST00000565646 AMNQ9BXJ7 453 aa14.72□□□□□ -0.05
CFDP1-205ENST00000565646 TEX13BQ9BXU2 312 aa14.72□□□□□ -0.05
CFDP1-205ENST00000565646 PORCNQ9H237 461 aa14.72□□□□□ -0.05
CFDP1-205ENST00000565646 RBM27Q9P2N5 1060 aaKnown RBP14.72□□□□□ -0.05
CFDP1-205ENST00000565646 SEC63Q9UGP8 760 aaKnown RBP14.72□□□□□ -0.05
CFDP1-205ENST00000565646 CCPG1Q9ULG6 757 aa14.72□□□□□ -0.05
CFDP1-205ENST00000565646 ALAS1P13196 640 aa14.71□□□□□ -0.05
CFDP1-205ENST00000565646 HMGN5P82970 282 aaKnown RBP14.71□□□□□ -0.05
CFDP1-205ENST00000565646 AKAP17AQ02040 695 aaKnown RBP14.71□□□□□ -0.05
CFDP1-205ENST00000565646 PLS1Q14651 629 aa14.71□□□□□ -0.05
CFDP1-205ENST00000565646 SLC9C1Q4G0N8 1177 aa14.71□□□□□ -0.05
CFDP1-205ENST00000565646 HEATR3Q7Z4Q2 680 aa14.71□□□□□ -0.05
CFDP1-205ENST00000565646 GJB4Q9NTQ9 266 aa14.71□□□□□ -0.05
CFDP1-205ENST00000565646 FOXD4L1Q9NU39 408 aa14.71□□□□□ -0.05
CFDP1-205ENST00000565646 BARHL2Q9NY43 387 aa14.71□□□□□ -0.05
CFDP1-205ENST00000565646 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.71□□□□□ -0.05
CFDP1-205ENST00000565646 CTDP1Q9Y5B0 961 aaPredicted RBP14.71□□□□□ -0.05
CFDP1-205ENST00000565646 PCDHA1Q9Y5I3 950 aa14.71□□□□□ -0.05
CFDP1-205ENST00000565646 NFIBO00712 420 aa14.7□□□□□ -0.06
CFDP1-205ENST00000565646 ERCC3P19447 782 aa14.7□□□□□ -0.06
CFDP1-205ENST00000565646 GJB2P29033 226 aa14.7□□□□□ -0.06
CFDP1-205ENST00000565646 ANP32AP39687 249 aaKnown RBP14.7□□□□□ -0.06
CFDP1-205ENST00000565646 SLC4A3P48751 1232 aa14.7□□□□□ -0.06
CFDP1-205ENST00000565646 BECN1Q14457 450 aa14.7□□□□□ -0.06
CFDP1-205ENST00000565646 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.7□□□□□ -0.06
CFDP1-205ENST00000565646 SHCBP1Q8NEM2 672 aa14.7□□□□□ -0.06
CFDP1-205ENST00000565646 ZNF333Q96JL9 665 aa14.7□□□□□ -0.06
CFDP1-205ENST00000565646 HOMER2Q9NSB8 354 aa14.7□□□□□ -0.06
CFDP1-205ENST00000565646 SMC3Q9UQE7 1217 aa14.7□□□□□ -0.06
CFDP1-205ENST00000565646 PTCH2Q9Y6C5 1203 aa14.7□□□□□ -0.06
CFDP1-205ENST00000565646 PLXNA1Q9UIW2 1896 aa14.69□□□□□ -0.06
CFDP1-205ENST00000565646 ABCB11O95342 1321 aa14.69□□□□□ -0.06
CFDP1-205ENST00000565646 hCG_1984214I3L0E3 225 aa14.69□□□□□ -0.06
CFDP1-205ENST00000565646 ADAMTS3O15072 1205 aa14.69□□□□□ -0.06
CFDP1-205ENST00000565646 SLC25A27O95847 323 aa14.69□□□□□ -0.06
CFDP1-205ENST00000565646 MYCP01106 439 aaPredicted RBP14.69□□□□□ -0.06
CFDP1-205ENST00000565646 CTGFP29279 349 aa14.69□□□□□ -0.06
CFDP1-205ENST00000565646 NPY5RQ15761 445 aa14.69□□□□□ -0.06
CFDP1-205ENST00000565646 TKFCQ3LXA3 575 aa14.69□□□□□ -0.06
CFDP1-205ENST00000565646 ZNF713Q8N859 430 aaPredicted RBP14.69□□□□□ -0.06
CFDP1-205ENST00000565646 TBC1D5Q92609 795 aa14.69□□□□□ -0.06
CFDP1-205ENST00000565646 TRERF1Q96PN7 1200 aa14.69□□□□□ -0.06
CFDP1-205ENST00000565646 ALG1Q9BT22 464 aa14.69□□□□□ -0.06
CFDP1-205ENST00000565646 RNF146Q9NTX7 359 aa14.69□□□□□ -0.06
CFDP1-205ENST00000565646 VPS54Q9P1Q0 977 aa14.69□□□□□ -0.06
CFDP1-205ENST00000565646 PNMA2Q9UL42 364 aa14.69□□□□□ -0.06
CFDP1-205ENST00000565646 BRCA2P51587 3418 aa14.69□□□□□ -0.06
CFDP1-205ENST00000565646 ZNF236Q9UL36 1845 aa14.69□□□□□ -0.06
CFDP1-205ENST00000565646 CCNA1P78396 465 aa14.68□□□□□ -0.06
CFDP1-205ENST00000565646 SPRYD3Q8NCJ5 442 aa14.68□□□□□ -0.06
CFDP1-205ENST00000565646 CHST13Q8NET6 341 aa14.68□□□□□ -0.06
CFDP1-205ENST00000565646 SH3GLB2Q9NR46 395 aa14.68□□□□□ -0.06
CFDP1-205ENST00000565646 MRPL11Q9Y3B7 192 aaKnown RBP14.68□□□□□ -0.06
CFDP1-205ENST00000565646 MCM3APO60318 1980 aa14.67□□□□□ -0.06
CFDP1-205ENST00000565646 ESYT2A0FGR8 921 aa14.67□□□□□ -0.06
CFDP1-205ENST00000565646 COPB2P35606 906 aa14.67□□□□□ -0.06
CFDP1-205ENST00000565646 FXR1P51114 621 aaKnown RBP eCLIP14.67□□□□□ -0.06
CFDP1-205ENST00000565646 FOSBP53539 338 aa14.67□□□□□ -0.06
CFDP1-205ENST00000565646 NAPAP54920 295 aa14.67□□□□□ -0.06
CFDP1-205ENST00000565646 LACTBP83111 547 aaPredicted RBP14.67□□□□□ -0.06
CFDP1-205ENST00000565646 GHRHRQ02643 423 aa14.67□□□□□ -0.06
CFDP1-205ENST00000565646 TRAF1Q13077 416 aa14.67□□□□□ -0.06
CFDP1-205ENST00000565646 KIF22Q14807 665 aa14.67□□□□□ -0.06
CFDP1-205ENST00000565646 PPP1R18Q6NYC8 613 aa14.67□□□□□ -0.06
CFDP1-205ENST00000565646 NCAPG2Q86XI2 1143 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms