RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 VCPKMTQ9H867 229 aa13.48□□□□□ -0.25
CAPN3-215ENST00000565559 ADAMTS5Q9UNA0 930 aa13.48□□□□□ -0.25
CAPN3-215ENST00000565559 ZDBF2Q9HCK1 2354 aa13.47□□□□□ -0.25
CAPN3-215ENST00000565559 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.47□□□□□ -0.25
CAPN3-215ENST00000565559 VWA5AO00534 786 aa13.47□□□□□ -0.25
CAPN3-215ENST00000565559 ADCY6O43306 1168 aa13.47□□□□□ -0.25
CAPN3-215ENST00000565559 B4GALT4O60513 344 aa13.47□□□□□ -0.25
CAPN3-215ENST00000565559 CYP2E1P05181 493 aaPredicted RBP13.47□□□□□ -0.25
CAPN3-215ENST00000565559 CT47B1P0C2W7 299 aaPredicted RBP13.47□□□□□ -0.25
CAPN3-215ENST00000565559 SUPT20HL2P0C7V6 817 aa13.47□□□□□ -0.25
CAPN3-215ENST00000565559 PLCD1P51178 756 aa13.47□□□□□ -0.25
CAPN3-215ENST00000565559 BEX3Q00994 111 aa13.47□□□□□ -0.25
CAPN3-215ENST00000565559 ICA1Q05084 483 aa13.47□□□□□ -0.25
CAPN3-215ENST00000565559 HFE2Q6ZVN8 426 aa13.47□□□□□ -0.25
CAPN3-215ENST00000565559 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.47□□□□□ -0.25
CAPN3-215ENST00000565559 FAM50BQ9Y247 325 aa13.47□□□□□ -0.25
CAPN3-215ENST00000565559 TMX2Q9Y320 296 aa13.47□□□□□ -0.25
CAPN3-215ENST00000565559 RFC2P35250 354 aa13.46□□□□□ -0.25
CAPN3-215ENST00000565559 NKX3-2P78367 333 aa13.46□□□□□ -0.25
CAPN3-215ENST00000565559 MAGEB6Q8N7X4 407 aa13.46□□□□□ -0.25
CAPN3-215ENST00000565559 GDPD5Q8WTR4 605 aa13.46□□□□□ -0.25
CAPN3-215ENST00000565559 SSH1Q8WYL5 1049 aa13.46□□□□□ -0.25
CAPN3-215ENST00000565559 AGBL1Q96MI9 1066 aa13.46□□□□□ -0.25
CAPN3-215ENST00000565559 PHOX2BQ99453 314 aa13.46□□□□□ -0.25
CAPN3-215ENST00000565559 PRRX2Q99811 253 aa13.46□□□□□ -0.25
CAPN3-215ENST00000565559 TEX13BQ9BXU2 312 aa13.46□□□□□ -0.25
CAPN3-215ENST00000565559 UPF3BQ9BZI7 483 aaKnown RBP13.46□□□□□ -0.25
CAPN3-215ENST00000565559 AP5M1Q9H0R1 490 aa13.46□□□□□ -0.25
CAPN3-215ENST00000565559 ZNF214Q9UL59 606 aaPredicted RBP13.46□□□□□ -0.25
CAPN3-215ENST00000565559 PPP1R9AQ9ULJ8 1098 aa13.46□□□□□ -0.25
CAPN3-215ENST00000565559 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.46□□□□□ -0.25
CAPN3-215ENST00000565559 CDK5RAP2Q96SN8 1893 aa13.46□□□□□ -0.26
CAPN3-215ENST00000565559 BRWD1Q9NSI6 2320 aa13.45□□□□□ -0.26
CAPN3-215ENST00000565559 GRXCR2A6NFK2 248 aa13.45□□□□□ -0.26
CAPN3-215ENST00000565559 IDH1O75874 414 aaKnown RBP13.45□□□□□ -0.26
CAPN3-215ENST00000565559 ARHGEF15O94989 841 aa13.45□□□□□ -0.26
CAPN3-215ENST00000565559 KCNJ6P48051 423 aa13.45□□□□□ -0.26
CAPN3-215ENST00000565559 TNFAIP2Q03169 654 aa13.45□□□□□ -0.26
CAPN3-215ENST00000565559 G3BP1Q13283 466 aaKnown RBP eCLIP13.45□□□□□ -0.26
CAPN3-215ENST00000565559 FSCN1Q16658 493 aaKnown RBP13.45□□□□□ -0.26
CAPN3-215ENST00000565559 SNRNP48Q6IEG0 339 aaKnown RBP13.45□□□□□ -0.26
CAPN3-215ENST00000565559 ARMCX2Q7L311 632 aa13.45□□□□□ -0.26
CAPN3-215ENST00000565559 FTOQ9C0B1 505 aaKnown RBP eCLIP13.45□□□□□ -0.26
CAPN3-215ENST00000565559 MYH1P12882 1939 aa13.45□□□□□ -0.26
CAPN3-215ENST00000565559 ZNFX1Q9P2E3 1918 aaKnown RBP13.45□□□□□ -0.26
CAPN3-215ENST00000565559 WDFY4Q6ZS81 3184 aa13.44□□□□□ -0.26
CAPN3-215ENST00000565559 DNAJC25-GNG10A0A024R161 153 aa13.44□□□□□ -0.26
CAPN3-215ENST00000565559 CTAGE5O15320 804 aa13.44□□□□□ -0.26
CAPN3-215ENST00000565559 GABPAQ06546 454 aa13.44□□□□□ -0.26
CAPN3-215ENST00000565559 TMED8Q6PL24 325 aaPredicted RBP13.44□□□□□ -0.26
CAPN3-215ENST00000565559 TLK2Q86UE8 772 aa13.44□□□□□ -0.26
CAPN3-215ENST00000565559 ANKRD35Q8N283 1001 aa13.44□□□□□ -0.26
CAPN3-215ENST00000565559 VWCEQ96DN2 955 aa13.44□□□□□ -0.26
CAPN3-215ENST00000565559 ZBED2Q9BTP6 218 aa13.44□□□□□ -0.26
CAPN3-215ENST00000565559 ALDH8A1Q9H2A2 487 aaPredicted RBP13.44□□□□□ -0.26
CAPN3-215ENST00000565559 GOPCQ9HD26 462 aa13.44□□□□□ -0.26
CAPN3-215ENST00000565559 PIH1D3Q9NQM4 214 aaKnown RBP13.44□□□□□ -0.26
CAPN3-215ENST00000565559 FBXO28Q9NVF7 368 aa13.44□□□□□ -0.26
CAPN3-215ENST00000565559 PRKAG3Q9UGI9 489 aa13.44□□□□□ -0.26
CAPN3-215ENST00000565559 SWAP70Q9UH65 585 aa13.44□□□□□ -0.26
CAPN3-215ENST00000565559 RAD21O60216 631 aa13.43□□□□□ -0.26
CAPN3-215ENST00000565559 GFRA3O60609 400 aa13.43□□□□□ -0.26
CAPN3-215ENST00000565559 BAIAP3O94812 1187 aa13.43□□□□□ -0.26
CAPN3-215ENST00000565559 ZAP70P43403 619 aa13.43□□□□□ -0.26
CAPN3-215ENST00000565559 SLC4A3P48751 1232 aa13.43□□□□□ -0.26
CAPN3-215ENST00000565559 PKN1Q16512 942 aa13.43□□□□□ -0.26
CAPN3-215ENST00000565559 ALDH1L2Q3SY69 923 aa13.43□□□□□ -0.26
CAPN3-215ENST00000565559 MCM9Q9NXL9 1143 aa13.43□□□□□ -0.26
CAPN3-215ENST00000565559 CTDP1Q9Y5B0 961 aaPredicted RBP13.43□□□□□ -0.26
CAPN3-215ENST00000565559 GRIN2DO15399 1336 aa13.42□□□□□ -0.26
CAPN3-215ENST00000565559 CYP2C9P11712 490 aa13.42□□□□□ -0.26
CAPN3-215ENST00000565559 PSMC6P62333 389 aa13.42□□□□□ -0.26
CAPN3-215ENST00000565559 MTX1Q13505 466 aa13.42□□□□□ -0.26
CAPN3-215ENST00000565559 CLEC10AQ8IUN9 316 aa13.42□□□□□ -0.26
CAPN3-215ENST00000565559 CCDC144CPQ8IYA2 1237 aa13.42□□□□□ -0.26
CAPN3-215ENST00000565559 RETREG2Q8NC44 543 aa13.42□□□□□ -0.26
CAPN3-215ENST00000565559 PRSS33Q8NF86 280 aa13.42□□□□□ -0.26
CAPN3-215ENST00000565559 REPS2Q8NFH8 660 aa13.42□□□□□ -0.26
CAPN3-215ENST00000565559 ZNF512BQ96KM6 892 aaPredicted RBP13.42□□□□□ -0.26
CAPN3-215ENST00000565559 MEIS3Q99687 375 aa13.42□□□□□ -0.26
CAPN3-215ENST00000565559 FBXO40Q9UH90 709 aa13.42□□□□□ -0.26
CAPN3-215ENST00000565559 MTUS1Q9ULD2 1270 aa13.42□□□□□ -0.26
CAPN3-215ENST00000565559 ZNF318Q5VUA4 2279 aa13.42□□□□□ -0.26
CAPN3-215ENST00000565559 TNKSO95271 1327 aa13.41□□□□□ -0.26
CAPN3-215ENST00000565559 GNAI3P08754 354 aa13.41□□□□□ -0.26
CAPN3-215ENST00000565559 ZP2Q05996 745 aa13.41□□□□□ -0.26
CAPN3-215ENST00000565559 SPRED2Q7Z698 418 aa13.41□□□□□ -0.26
CAPN3-215ENST00000565559 SIAH1Q8IUQ4 282 aa13.41□□□□□ -0.26
CAPN3-215ENST00000565559 ANKS1AQ92625 1134 aa13.41□□□□□ -0.26
CAPN3-215ENST00000565559 TGS1Q96RS0 853 aaKnown RBP13.41□□□□□ -0.26
CAPN3-215ENST00000565559 SLF1Q9BQI6 1058 aa13.41□□□□□ -0.26
CAPN3-215ENST00000565559 DBNDD2Q9BQY9 259 aa13.41□□□□□ -0.26
CAPN3-215ENST00000565559 CRNKL1Q9BZJ0 848 aaKnown RBP13.41□□□□□ -0.26
CAPN3-215ENST00000565559 SUGCTQ9HAC7 445 aa13.41□□□□□ -0.26
CAPN3-215ENST00000565559 SMC4Q9NTJ3 1288 aa13.41□□□□□ -0.26
CAPN3-215ENST00000565559 TRMT13Q9NUP7 481 aaKnown RBP13.41□□□□□ -0.26
CAPN3-215ENST00000565559 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.4□□□□□ -0.26
CAPN3-215ENST00000565559 H3BQ06 376 aaPredicted RBP13.4□□□□□ -0.26
CAPN3-215ENST00000565559 DYNC1LI2O43237 492 aaPredicted RBP13.4□□□□□ -0.26
CAPN3-215ENST00000565559 AKR1B1P15121 316 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms