RNA–Protein interactions for RNA: ENST00000565550.1

SPSB3-207, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 898 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-207ENST00000565550 PCSK9Q8NBP7 692 aaKnown RBP22.32■■□□□ 1.16
SPSB3-207ENST00000565550 GLT1D1Q96MS3 346 aa22.32■■□□□ 1.16
SPSB3-207ENST00000565550 UPF3AQ9H1J1 476 aaKnown RBP22.32■■□□□ 1.16
SPSB3-207ENST00000565550 TOMM22Q9NS69 142 aa22.32■■□□□ 1.16
SPSB3-207ENST00000565550 LAMA4Q16363 1823 aa22.31■■□□□ 1.16
SPSB3-207ENST00000565550 MUM1L1Q5H9M0 696 aa22.31■■□□□ 1.16
SPSB3-207ENST00000565550 RRP12Q5JTH9 1297 aaKnown RBP22.31■■□□□ 1.16
SPSB3-207ENST00000565550 GNASQ5JWF2 1037 aa22.31■■□□□ 1.16
SPSB3-207ENST00000565550 VTI1AQ96AJ9 217 aa22.31■■□□□ 1.16
SPSB3-207ENST00000565550 ELP1O95163 1332 aa22.31■■□□□ 1.16
SPSB3-207ENST00000565550 CCDC96Q2M329 555 aa22.3■■□□□ 1.16
SPSB3-207ENST00000565550 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.29■■□□□ 1.16
SPSB3-207ENST00000565550 ASB14A6NK59 587 aa22.29■■□□□ 1.16
SPSB3-207ENST00000565550 HSPD1P10809 573 aaKnown RBP22.29■■□□□ 1.16
SPSB3-207ENST00000565550 SLC16A2P36021 539 aa22.29■■□□□ 1.16
SPSB3-207ENST00000565550 CDK7P50613 346 aa22.29■■□□□ 1.16
SPSB3-207ENST00000565550 SMAD3P84022 425 aaKnown RBP22.29■■□□□ 1.16
SPSB3-207ENST00000565550 TNFAIP2Q03169 654 aa22.29■■□□□ 1.16
SPSB3-207ENST00000565550 FPGSQ05932 587 aa22.29■■□□□ 1.16
SPSB3-207ENST00000565550 TTBK2Q6IQ55 1244 aa22.29■■□□□ 1.16
SPSB3-207ENST00000565550 DCAF4Q8WV16 495 aa22.29■■□□□ 1.16
SPSB3-207ENST00000565550 DIAPH3Q9NSV4 1193 aa22.29■■□□□ 1.16
SPSB3-207ENST00000565550 CCPG1Q9ULG6 757 aa22.29■■□□□ 1.16
SPSB3-207ENST00000565550 DDX49Q9Y6V7 483 aaKnown RBP22.29■■□□□ 1.16
SPSB3-207ENST00000565550 CCDC171Q6TFL3 1326 aa22.29■■□□□ 1.16
SPSB3-207ENST00000565550 CTAGE5O15320 804 aa22.28■■□□□ 1.16
SPSB3-207ENST00000565550 NOL8Q76FK4 1167 aaKnown RBP22.28■■□□□ 1.16
SPSB3-207ENST00000565550 TICAM2Q86XR7 235 aa22.28■■□□□ 1.16
SPSB3-207ENST00000565550 RNPC3Q96LT9 517 aaKnown RBP22.28■■□□□ 1.16
SPSB3-207ENST00000565550 TMEM47Q9BQJ4 181 aa22.28■■□□□ 1.16
SPSB3-207ENST00000565550 SEMA6BQ9H3T3 888 aa22.28■■□□□ 1.16
SPSB3-207ENST00000565550 PPP4R2Q9NY27 417 aa22.28■■□□□ 1.16
SPSB3-207ENST00000565550 CYP39A1Q9NYL5 469 aa22.28■■□□□ 1.16
SPSB3-207ENST00000565550 LAMA2P24043 3122 aaKnown RBP22.28■■□□□ 1.16
SPSB3-207ENST00000565550 ASTN1O14525 1302 aa22.28■■□□□ 1.16
SPSB3-207ENST00000565550 MCM3APO60318 1980 aa22.27■■□□□ 1.16
SPSB3-207ENST00000565550 ARVCFO00192 962 aa22.27■■□□□ 1.16
SPSB3-207ENST00000565550 TIMP1P01033 207 aa22.27■■□□□ 1.16
SPSB3-207ENST00000565550 TOP1P11387 765 aaKnown RBP22.27■■□□□ 1.16
SPSB3-207ENST00000565550 HAND2P61296 217 aa22.27■■□□□ 1.16
SPSB3-207ENST00000565550 NKX3-2P78367 333 aa22.27■■□□□ 1.16
SPSB3-207ENST00000565550 BEX3Q00994 111 aa22.27■■□□□ 1.16
SPSB3-207ENST00000565550 NSMFQ6X4W1 530 aa22.27■■□□□ 1.16
SPSB3-207ENST00000565550 PURBQ96QR8 312 aaKnown RBP22.27■■□□□ 1.16
SPSB3-207ENST00000565550 RANBP17Q9H2T7 1088 aaKnown RBP22.27■■□□□ 1.16
SPSB3-207ENST00000565550 TCP11L1Q9NUJ3 509 aa22.27■■□□□ 1.16
SPSB3-207ENST00000565550 TBX21Q9UL17 535 aa22.27■■□□□ 1.16
SPSB3-207ENST00000565550 A0A0U1RQG5 324 aaPredicted RBP22.26■■□□□ 1.15
SPSB3-207ENST00000565550 ICAM1P05362 532 aa22.26■■□□□ 1.15
SPSB3-207ENST00000565550 SYDE2Q5VT97 1194 aa22.26■■□□□ 1.15
SPSB3-207ENST00000565550 BTNL9Q6UXG8 535 aa22.26■■□□□ 1.15
SPSB3-207ENST00000565550 EEPD1Q7L9B9 569 aa22.26■■□□□ 1.15
SPSB3-207ENST00000565550 CDX2Q99626 313 aaPredicted RBP22.26■■□□□ 1.15
SPSB3-207ENST00000565550 GPCPD1Q9NPB8 672 aa22.26■■□□□ 1.15
SPSB3-207ENST00000565550 PDGFCQ9NRA1 345 aa22.26■■□□□ 1.15
SPSB3-207ENST00000565550 GNEQ9Y223 722 aaKnown RBP22.26■■□□□ 1.15
SPSB3-207ENST00000565550 MROH7Q68CQ1 1323 aa22.26■■□□□ 1.15
SPSB3-207ENST00000565550 FRMPD2Q68DX3 1309 aaPredicted RBP22.26■■□□□ 1.15
SPSB3-207ENST00000565550 PTGS1P23219 599 aa22.25■■□□□ 1.15
SPSB3-207ENST00000565550 DYNC1LI2O43237 492 aaPredicted RBP22.24■■□□□ 1.15
SPSB3-207ENST00000565550 SMPD1P17405 629 aa22.24■■□□□ 1.15
SPSB3-207ENST00000565550 CHMLP26374 656 aa22.24■■□□□ 1.15
SPSB3-207ENST00000565550 MFSD5Q6N075 450 aa22.24■■□□□ 1.15
SPSB3-207ENST00000565550 TAPT1Q6NXT6 567 aa22.24■■□□□ 1.15
SPSB3-207ENST00000565550 CXCL17Q6UXB2 119 aa22.24■■□□□ 1.15
SPSB3-207ENST00000565550 TLK2Q86UE8 772 aa22.24■■□□□ 1.15
SPSB3-207ENST00000565550 TTYH1Q9H313 450 aaPredicted RBP22.24■■□□□ 1.15
SPSB3-207ENST00000565550 ZMYM6O95789 1325 aa22.24■■□□□ 1.15
SPSB3-207ENST00000565550 BAATQ14032 418 aaPredicted RBP22.23■■□□□ 1.15
SPSB3-207ENST00000565550 AKNAD1Q5T1N1 836 aa22.23■■□□□ 1.15
SPSB3-207ENST00000565550 TMEM63BQ5T3F8 832 aa22.23■■□□□ 1.15
SPSB3-207ENST00000565550 IQSEC1Q6DN90 963 aa22.23■■□□□ 1.15
SPSB3-207ENST00000565550 MFSD6Q6ZSS7 791 aa22.23■■□□□ 1.15
SPSB3-207ENST00000565550 FBXO16Q8IX29 292 aaPredicted RBP22.23■■□□□ 1.15
SPSB3-207ENST00000565550 FAM126BQ8IXS8 530 aa22.23■■□□□ 1.15
SPSB3-207ENST00000565550 TTC14Q96N46 770 aa22.23■■□□□ 1.15
SPSB3-207ENST00000565550 AP5M1Q9H0R1 490 aa22.23■■□□□ 1.15
SPSB3-207ENST00000565550 HIP1O00291 1037 aa22.22■■□□□ 1.15
SPSB3-207ENST00000565550 PDHBP11177 359 aa22.22■■□□□ 1.15
SPSB3-207ENST00000565550 FSCN1Q16658 493 aaKnown RBP22.22■■□□□ 1.15
SPSB3-207ENST00000565550 TBC1D10CQ8IV04 446 aa22.22■■□□□ 1.15
SPSB3-207ENST00000565550 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.22■■□□□ 1.152e-25■■□□□ 13
SPSB3-207ENST00000565550 NFIBO00712 420 aa22.21■■□□□ 1.15
SPSB3-207ENST00000565550 TLR3O15455 904 aaKnown RBP22.21■■□□□ 1.15
SPSB3-207ENST00000565550 PCP11498 1178 aaKnown RBP22.21■■□□□ 1.15
SPSB3-207ENST00000565550 ERICH6BQ5W0A0 696 aa22.21■■□□□ 1.15
SPSB3-207ENST00000565550 KIAA1211Q6ZU35 1233 aa22.21■■□□□ 1.15
SPSB3-207ENST00000565550 C16orf59Q7L2K0 433 aa22.21■■□□□ 1.15
SPSB3-207ENST00000565550 MORC4Q8TE76 937 aa22.21■■□□□ 1.15
SPSB3-207ENST00000565550 PPP1R12CQ9BZL4 782 aa22.21■■□□□ 1.15
SPSB3-207ENST00000565550 VTA1Q9NP79 307 aa22.21■■□□□ 1.15
SPSB3-207ENST00000565550 A0A0C4DFX4 3053 aa22.21■■□□□ 1.15
SPSB3-207ENST00000565550 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.2■■□□□ 1.14
SPSB3-207ENST00000565550 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.2■■□□□ 1.14
SPSB3-207ENST00000565550 PTPDC1A2A3K4 754 aa22.2■■□□□ 1.14
SPSB3-207ENST00000565550 CABYRO75952 493 aa22.2■■□□□ 1.14
SPSB3-207ENST00000565550 CD4P01730 458 aa22.2■■□□□ 1.14
SPSB3-207ENST00000565550 MFAP1P55081 439 aaKnown RBP22.2■■□□□ 1.14
SPSB3-207ENST00000565550 ZNF543Q08ER8 600 aa22.2■■□□□ 1.14
SPSB3-207ENST00000565550 SLC43A3Q8NBI5 491 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms