RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 CYP39A1Q9NYL5 469 aa28.01■■■□□ 2.07
RAB40C-209ENST00000565511 CLTBP09497 229 aa28■■■□□ 2.07
RAB40C-209ENST00000565511 C6orf222P0C671 652 aaPredicted RBP28■■■□□ 2.07
RAB40C-209ENST00000565511 PDHBP11177 359 aa28■■■□□ 2.07
RAB40C-209ENST00000565511 CST5P28325 142 aaPredicted RBP28■■■□□ 2.07
RAB40C-209ENST00000565511 EPHB4P54760 987 aa28■■■□□ 2.07
RAB40C-209ENST00000565511 TMEM63BQ5T3F8 832 aa28■■■□□ 2.07
RAB40C-209ENST00000565511 CWC27Q6UX04 472 aaKnown RBP28■■■□□ 2.07
RAB40C-209ENST00000565511 ICAM1P05362 532 aa27.99■■■□□ 2.07
RAB40C-209ENST00000565511 GJA9P57773 515 aa27.99■■■□□ 2.07
RAB40C-209ENST00000565511 ZKSCAN3Q9BRR0 538 aa27.99■■■□□ 2.07
RAB40C-209ENST00000565511 STARD7Q9NQZ5 370 aa27.99■■■□□ 2.07
RAB40C-209ENST00000565511 MTMR10Q9NXD2 777 aa27.99■■■□□ 2.07
RAB40C-209ENST00000565511 MOXD2PA6NHM9 499 aa27.98■■■□□ 2.07
RAB40C-209ENST00000565511 NFIBO00712 420 aa27.98■■■□□ 2.07
RAB40C-209ENST00000565511 PDE4AP27815 886 aa27.98■■■□□ 2.07
RAB40C-209ENST00000565511 FAAP100Q0VG06 881 aa27.98■■■□□ 2.07
RAB40C-209ENST00000565511 NSMFQ6X4W1 530 aa27.98■■■□□ 2.07
RAB40C-209ENST00000565511 MFSD6Q6ZSS7 791 aa27.98■■■□□ 2.07
RAB40C-209ENST00000565511 PDGFCQ9NRA1 345 aa27.98■■■□□ 2.07
RAB40C-209ENST00000565511 KIAA0355O15063 1070 aa27.97■■■□□ 2.07
RAB40C-209ENST00000565511 ASGR1P07306 291 aa27.97■■■□□ 2.07
RAB40C-209ENST00000565511 BEX3Q00994 111 aa27.97■■■□□ 2.07
RAB40C-209ENST00000565511 ANKRD33Q7Z3H0 272 aa27.97■■■□□ 2.07
RAB40C-209ENST00000565511 FBXO16Q8IX29 292 aaPredicted RBP27.97■■■□□ 2.07
RAB40C-209ENST00000565511 SUPT16HQ9Y5B9 1047 aaKnown RBP27.97■■■□□ 2.07
RAB40C-209ENST00000565511 SNHG28P0DPA3 235 aa27.96■■■□□ 2.07
RAB40C-209ENST00000565511 ZNF543Q08ER8 600 aa27.96■■■□□ 2.07
RAB40C-209ENST00000565511 CPVLQ9H3G5 476 aa27.96■■■□□ 2.07
RAB40C-209ENST00000565511 DIAPH3Q9NSV4 1193 aa27.96■■■□□ 2.07
RAB40C-209ENST00000565511 GNEQ9Y223 722 aaKnown RBP27.96■■■□□ 2.07
RAB40C-209ENST00000565511 EEPD1Q7L9B9 569 aa27.95■■■□□ 2.06
RAB40C-209ENST00000565511 CLEC4DQ8WXI8 215 aa27.95■■■□□ 2.06
RAB40C-209ENST00000565511 ASB14A6NK59 587 aa27.94■■■□□ 2.06
RAB40C-209ENST00000565511 SMPD1P17405 629 aa27.94■■■□□ 2.06
RAB40C-209ENST00000565511 NKX3-2P78367 333 aa27.94■■■□□ 2.06
RAB40C-209ENST00000565511 TNFAIP2Q03169 654 aa27.94■■■□□ 2.06
RAB40C-209ENST00000565511 BAATQ14032 418 aaPredicted RBP27.94■■■□□ 2.06
RAB40C-209ENST00000565511 TAPT1Q6NXT6 567 aa27.94■■■□□ 2.06
RAB40C-209ENST00000565511 SLC30A10Q6XR72 485 aa27.94■■■□□ 2.06
RAB40C-209ENST00000565511 NUP133Q8WUM0 1156 aa27.94■■■□□ 2.06
RAB40C-209ENST00000565511 GOLGA8HP0CJ92 632 aa27.93■■■□□ 2.06
RAB40C-209ENST00000565511 PCP11498 1178 aaKnown RBP27.93■■■□□ 2.06
RAB40C-209ENST00000565511 GSPT1P15170 499 aaKnown RBP27.93■■■□□ 2.06
RAB40C-209ENST00000565511 CDK7P50613 346 aa27.93■■■□□ 2.06
RAB40C-209ENST00000565511 MFAP1P55081 439 aaKnown RBP27.93■■■□□ 2.06
RAB40C-209ENST00000565511 GNASQ5JWF2 1037 aa27.93■■■□□ 2.06
RAB40C-209ENST00000565511 MORC4Q8TE76 937 aa27.93■■■□□ 2.06
RAB40C-209ENST00000565511 TOX2Q96NM4 488 aa27.93■■■□□ 2.06
RAB40C-209ENST00000565511 TMEM39AQ9NV64 488 aa27.93■■■□□ 2.06
RAB40C-209ENST00000565511 TBX21Q9UL17 535 aa27.93■■■□□ 2.06
RAB40C-209ENST00000565511 B4E1Z4 1266 aa27.92■■■□□ 2.06
RAB40C-209ENST00000565511 KDM4AO75164 1064 aa27.92■■■□□ 2.06
RAB40C-209ENST00000565511 TLK2Q86UE8 772 aa27.92■■■□□ 2.06
RAB40C-209ENST00000565511 TTC14Q96N46 770 aa27.92■■■□□ 2.06
RAB40C-209ENST00000565511 GUCD1Q96NT3 240 aa27.92■■■□□ 2.06
RAB40C-209ENST00000565511 RNF41Q9H4P4 317 aaPredicted RBP27.92■■■□□ 2.06
RAB40C-209ENST00000565511 ELP1O95163 1332 aa27.92■■■□□ 2.06
RAB40C-209ENST00000565511 ZNF213O14771 459 aa27.91■■■□□ 2.06
RAB40C-209ENST00000565511 RAG1P15918 1043 aa27.91■■■□□ 2.06
RAB40C-209ENST00000565511 IRX6P78412 446 aaPredicted RBP27.91■■■□□ 2.06
RAB40C-209ENST00000565511 PCSK9Q8NBP7 692 aaKnown RBP27.91■■■□□ 2.06
RAB40C-209ENST00000565511 ESR2Q92731 530 aa27.91■■■□□ 2.06
RAB40C-209ENST00000565511 GLT1D1Q96MS3 346 aa27.91■■■□□ 2.06
RAB40C-209ENST00000565511 FAM161BQ96MY7 647 aa27.91■■■□□ 2.06
RAB40C-209ENST00000565511 ALDH5A1P51649 535 aaPredicted RBP27.9■■■□□ 2.06
RAB40C-209ENST00000565511 CXCL17Q6UXB2 119 aa27.9■■■□□ 2.06
RAB40C-209ENST00000565511 NOL8Q76FK4 1167 aaKnown RBP27.9■■■□□ 2.06
RAB40C-209ENST00000565511 DSCC1Q9BVC3 393 aa27.9■■■□□ 2.06
RAB40C-209ENST00000565511 SPC25Q9HBM1 224 aa27.9■■■□□ 2.06
RAB40C-209ENST00000565511 A0A0U1RQG5 324 aaPredicted RBP27.89■■■□□ 2.06
RAB40C-209ENST00000565511 DCDC2CA8MYV0 355 aa27.89■■■□□ 2.06
RAB40C-209ENST00000565511 UBA5Q9GZZ9 404 aa27.89■■■□□ 2.06
RAB40C-209ENST00000565511 PTPDC1A2A3K4 754 aa27.88■■■□□ 2.05
RAB40C-209ENST00000565511 ARVCFO00192 962 aa27.88■■■□□ 2.05
RAB40C-209ENST00000565511 FAM109BQ6ICB4 259 aaPredicted RBP27.88■■■□□ 2.05
RAB40C-209ENST00000565511 FAM126BQ8IXS8 530 aa27.88■■■□□ 2.05
RAB40C-209ENST00000565511 ENAHQ8N8S7 591 aaPredicted RBP27.88■■■□□ 2.05
RAB40C-209ENST00000565511 STXBP5LQ9Y2K9 1186 aa27.88■■■□□ 2.05
RAB40C-209ENST00000565511 MYH6P13533 1939 aa27.88■■■□□ 2.05
RAB40C-209ENST00000565511 GRIN2DO15399 1336 aa27.88■■■□□ 2.05
RAB40C-209ENST00000565511 DYNC1LI2O43237 492 aaPredicted RBP27.87■■■□□ 2.05
RAB40C-209ENST00000565511 CALML3P27482 149 aa27.87■■■□□ 2.05
RAB40C-209ENST00000565511 FPGSQ05932 587 aa27.87■■■□□ 2.05
RAB40C-209ENST00000565511 FSCN1Q16658 493 aaKnown RBP27.87■■■□□ 2.05
RAB40C-209ENST00000565511 TTC22Q5TAA0 569 aa27.87■■■□□ 2.05
RAB40C-209ENST00000565511 DGKHQ86XP1 1220 aa27.87■■■□□ 2.05
RAB40C-209ENST00000565511 PNMA1Q8ND90 353 aa27.87■■■□□ 2.05
RAB40C-209ENST00000565511 VTI1AQ96AJ9 217 aa27.87■■■□□ 2.05
RAB40C-209ENST00000565511 VTA1Q9NP79 307 aa27.87■■■□□ 2.05
RAB40C-209ENST00000565511 WDR19Q8NEZ3 1342 aa27.87■■■□□ 2.05
RAB40C-209ENST00000565511 HIP1O00291 1037 aa27.86■■■□□ 2.05
RAB40C-209ENST00000565511 ANKS1AQ92625 1134 aa27.86■■■□□ 2.05
RAB40C-209ENST00000565511 ZSWIM5Q9P217 1185 aa27.86■■■□□ 2.05
RAB40C-209ENST00000565511 TIMP1P01033 207 aa27.85■■■□□ 2.05
RAB40C-209ENST00000565511 RPS6P62753 249 aaKnown RBP27.85■■■□□ 2.05
RAB40C-209ENST00000565511 USH1GQ495M9 461 aa27.85■■■□□ 2.05
RAB40C-209ENST00000565511 IQSEC1Q6DN90 963 aa27.85■■■□□ 2.05
RAB40C-209ENST00000565511 SLC43A3Q8NBI5 491 aa27.85■■■□□ 2.05
RAB40C-209ENST00000565511 RNPC3Q96LT9 517 aaKnown RBP27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 161.1 ms