RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 TRIM43BA6NCK2 446 aa18.41■□□□□ 0.54
CDH3-204ENST00000565453 MOXD2PA6NHM9 499 aa18.41■□□□□ 0.54
CDH3-204ENST00000565453 ASB14A6NK59 587 aa18.41■□□□□ 0.54
CDH3-204ENST00000565453 CTAGE5O15320 804 aa18.41■□□□□ 0.54
CDH3-204ENST00000565453 KDM4AO75164 1064 aa18.41■□□□□ 0.54
CDH3-204ENST00000565453 ACLYP53396 1101 aa18.41■□□□□ 0.54
CDH3-204ENST00000565453 GJA9P57773 515 aa18.41■□□□□ 0.54
CDH3-204ENST00000565453 NKX3-2P78367 333 aa18.41■□□□□ 0.54
CDH3-204ENST00000565453 TLE2Q04725 743 aa18.41■□□□□ 0.54
CDH3-204ENST00000565453 KCNA10Q16322 511 aa18.41■□□□□ 0.54
CDH3-204ENST00000565453 MORC4Q8TE76 937 aa18.41■□□□□ 0.54
CDH3-204ENST00000565453 TRIM43Q96BQ3 446 aaPredicted RBP18.41■□□□□ 0.54
CDH3-204ENST00000565453 LBHD1Q9BQE6 289 aaPredicted RBP18.41■□□□□ 0.54
CDH3-204ENST00000565453 PRKAG2Q9UGJ0 569 aa18.41■□□□□ 0.54
CDH3-204ENST00000565453 DDX49Q9Y6V7 483 aaKnown RBP18.41■□□□□ 0.54
CDH3-204ENST00000565453 SZT2Q5T011 3432 aa18.41■□□□□ 0.54
CDH3-204ENST00000565453 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.4■□□□□ 0.54
CDH3-204ENST00000565453 B4E1Z4 1266 aa18.4■□□□□ 0.54
CDH3-204ENST00000565453 NFIBO00712 420 aa18.4■□□□□ 0.54
CDH3-204ENST00000565453 IMMTQ16891 758 aaKnown RBP18.4■□□□□ 0.54
CDH3-204ENST00000565453 GPR153Q6NV75 609 aa18.4■□□□□ 0.54
CDH3-204ENST00000565453 NSMFQ6X4W1 530 aa18.4■□□□□ 0.54
CDH3-204ENST00000565453 CLEC4DQ8WXI8 215 aa18.4■□□□□ 0.54
CDH3-204ENST00000565453 PURBQ96QR8 312 aaKnown RBP18.4■□□□□ 0.54
CDH3-204ENST00000565453 PRDM5Q9NQX1 630 aaPredicted RBP18.4■□□□□ 0.54
CDH3-204ENST00000565453 CTNNA3Q9UI47 895 aa18.4■□□□□ 0.54
CDH3-204ENST00000565453 CCDC178Q5BJE1 867 aa18.39■□□□□ 0.53
CDH3-204ENST00000565453 IQCA1Q86XH1 822 aa18.39■□□□□ 0.53
CDH3-204ENST00000565453 ZSCAN10Q96SZ4 725 aaPredicted RBP18.39■□□□□ 0.53
CDH3-204ENST00000565453 STARD7Q9NQZ5 370 aa18.39■□□□□ 0.53
CDH3-204ENST00000565453 ZSWIM5Q9P217 1185 aa18.39■□□□□ 0.53
CDH3-204ENST00000565453 GNEQ9Y223 722 aaKnown RBP18.39■□□□□ 0.53
CDH3-204ENST00000565453 WDR19Q8NEZ3 1342 aa18.39■□□□□ 0.53
CDH3-204ENST00000565453 RAD50Q92878 1312 aa18.39■□□□□ 0.53
CDH3-204ENST00000565453 C6orf222P0C671 652 aaPredicted RBP18.38■□□□□ 0.53
CDH3-204ENST00000565453 ITGB8P26012 769 aa18.38■□□□□ 0.53
CDH3-204ENST00000565453 TNFAIP2Q03169 654 aa18.38■□□□□ 0.53
CDH3-204ENST00000565453 BAATQ14032 418 aaPredicted RBP18.38■□□□□ 0.53
CDH3-204ENST00000565453 GPATCH4Q5T3I0 446 aaKnown RBP18.38■□□□□ 0.53
CDH3-204ENST00000565453 TAPT1Q6NXT6 567 aa18.38■□□□□ 0.53
CDH3-204ENST00000565453 ANKRD33Q7Z3H0 272 aa18.38■□□□□ 0.53
CDH3-204ENST00000565453 ENAHQ8N8S7 591 aaPredicted RBP18.38■□□□□ 0.53
CDH3-204ENST00000565453 PNMA1Q8ND90 353 aa18.38■□□□□ 0.53
CDH3-204ENST00000565453 NUP133Q8WUM0 1156 aa18.38■□□□□ 0.53
CDH3-204ENST00000565453 BADQ92934 168 aa18.38■□□□□ 0.53
CDH3-204ENST00000565453 PNMA2Q9UL42 364 aa18.38■□□□□ 0.53
CDH3-204ENST00000565453 KIAA0355O15063 1070 aa18.37■□□□□ 0.53
CDH3-204ENST00000565453 ASGR1P07306 291 aa18.37■□□□□ 0.53
CDH3-204ENST00000565453 CLTBP09497 229 aa18.37■□□□□ 0.53
CDH3-204ENST00000565453 GOLGA8HP0CJ92 632 aa18.37■□□□□ 0.53
CDH3-204ENST00000565453 CHMLP26374 656 aa18.37■□□□□ 0.53
CDH3-204ENST00000565453 PCSK9Q8NBP7 692 aaKnown RBP18.37■□□□□ 0.53
CDH3-204ENST00000565453 TOX2Q96NM4 488 aa18.37■□□□□ 0.53
CDH3-204ENST00000565453 CPVLQ9H3G5 476 aa18.37■□□□□ 0.53
CDH3-204ENST00000565453 SPC25Q9HBM1 224 aa18.37■□□□□ 0.53
CDH3-204ENST00000565453 PDGFCQ9NRA1 345 aa18.37■□□□□ 0.53
CDH3-204ENST00000565453 ELP1O95163 1332 aa18.37■□□□□ 0.53
CDH3-204ENST00000565453 LAMA3Q16787 3333 aa18.36■□□□□ 0.53
CDH3-204ENST00000565453 LOC102724159A0A0B4J2E5 919 aa18.36■□□□□ 0.53
CDH3-204ENST00000565453 PQBP1O60828 265 aaKnown RBP18.36■□□□□ 0.53
CDH3-204ENST00000565453 TNKSO95271 1327 aa18.36■□□□□ 0.53
CDH3-204ENST00000565453 SMPD1P17405 629 aa18.36■□□□□ 0.53
CDH3-204ENST00000565453 PTGS1P23219 599 aa18.36■□□□□ 0.53
CDH3-204ENST00000565453 CDK7P50613 346 aa18.36■□□□□ 0.53
CDH3-204ENST00000565453 ALDH5A1P51649 535 aaPredicted RBP18.36■□□□□ 0.53
CDH3-204ENST00000565453 FAAP100Q0VG06 881 aa18.36■□□□□ 0.53
CDH3-204ENST00000565453 PWP2Q15269 919 aaKnown RBP18.36■□□□□ 0.53
CDH3-204ENST00000565453 TMEM63BQ5T3F8 832 aa18.36■□□□□ 0.53
CDH3-204ENST00000565453 SLC30A10Q6XR72 485 aa18.36■□□□□ 0.53
CDH3-204ENST00000565453 FBXO16Q8IX29 292 aaPredicted RBP18.36■□□□□ 0.53
CDH3-204ENST00000565453 KRT23Q9C075 422 aa18.36■□□□□ 0.53
CDH3-204ENST00000565453 UBA5Q9GZZ9 404 aa18.36■□□□□ 0.53
CDH3-204ENST00000565453 KAT14Q9H8E8 782 aa18.36■□□□□ 0.53
CDH3-204ENST00000565453 CNNM2Q9H8M5 875 aa18.36■□□□□ 0.53
CDH3-204ENST00000565453 DNAH12Q6ZR08 3092 aa18.35■□□□□ 0.53
CDH3-204ENST00000565453 BEX3Q00994 111 aa18.35■□□□□ 0.53
CDH3-204ENST00000565453 GNASQ5JWF2 1037 aa18.35■□□□□ 0.53
CDH3-204ENST00000565453 IQSEC1Q6DN90 963 aa18.35■□□□□ 0.53
CDH3-204ENST00000565453 EEPD1Q7L9B9 569 aa18.35■□□□□ 0.53
CDH3-204ENST00000565453 TLK2Q86UE8 772 aa18.35■□□□□ 0.53
CDH3-204ENST00000565453 GLT1D1Q96MS3 346 aa18.35■□□□□ 0.53
CDH3-204ENST00000565453 VTA1Q9NP79 307 aa18.35■□□□□ 0.53
CDH3-204ENST00000565453 ADD3Q9UEY8 706 aaKnown RBP18.35■□□□□ 0.53
CDH3-204ENST00000565453 PTPDC1A2A3K4 754 aa18.34■□□□□ 0.53
CDH3-204ENST00000565453 PTH1RQ03431 593 aa18.34■□□□□ 0.53
CDH3-204ENST00000565453 SEC23AQ15436 765 aa18.34■□□□□ 0.53
CDH3-204ENST00000565453 SHHQ15465 462 aa18.34■□□□□ 0.53
CDH3-204ENST00000565453 ASPRV1Q53RT3 343 aa18.34■□□□□ 0.53
CDH3-204ENST00000565453 C9orf50Q5SZB4 431 aa18.34■□□□□ 0.53
CDH3-204ENST00000565453 RNF207Q6ZRF8 634 aa18.34■□□□□ 0.53
CDH3-204ENST00000565453 CYB5R4Q7L1T6 521 aa18.34■□□□□ 0.53
CDH3-204ENST00000565453 Q9Y3F1 56 aa18.34■□□□□ 0.53
CDH3-204ENST00000565453 A0A0U1RQG5 324 aaPredicted RBP18.33■□□□□ 0.52
CDH3-204ENST00000565453 RBM47A0AV96 593 aaKnown RBP18.33■□□□□ 0.52
CDH3-204ENST00000565453 DCDC2CA8MYV0 355 aa18.33■□□□□ 0.52
CDH3-204ENST00000565453 RPS6P62753 249 aaKnown RBP18.33■□□□□ 0.52
CDH3-204ENST00000565453 CDC37Q16543 378 aaPredicted RBP18.33■□□□□ 0.52
CDH3-204ENST00000565453 Q7L0L9 218 aa18.33■□□□□ 0.52
CDH3-204ENST00000565453 ADGRF4Q8IZF3 695 aa18.33■□□□□ 0.52
CDH3-204ENST00000565453 RUFY2Q8WXA3 655 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms