RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 GALNT18Q6P9A2 607 aa6.85□□□□□ -1.31
CHD9-215ENST00000565442 ZNF655Q8N720 491 aaPredicted RBP6.85□□□□□ -1.31
CHD9-215ENST00000565442 RBBP8NLQ8NC74 664 aaPredicted RBP6.85□□□□□ -1.31
CHD9-215ENST00000565442 LINC00116Q8NCU8 138 aa6.85□□□□□ -1.31
CHD9-215ENST00000565442 HNRNPLLQ8WVV9 542 aaKnown RBP6.85□□□□□ -1.31
CHD9-215ENST00000565442 GMIPQ9P107 970 aa6.85□□□□□ -1.31
CHD9-215ENST00000565442 PRKAG3Q9UGI9 489 aa6.85□□□□□ -1.31
CHD9-215ENST00000565442 PALD1Q9ULE6 856 aa6.85□□□□□ -1.31
CHD9-215ENST00000565442 MEIS3P2A8K0S8 358 aa6.84□□□□□ -1.31
CHD9-215ENST00000565442 K7ESM1 405 aa6.84□□□□□ -1.31
CHD9-215ENST00000565442 FKTNO75072 461 aa6.84□□□□□ -1.31
CHD9-215ENST00000565442 SLURP1P55000 103 aa6.84□□□□□ -1.31
CHD9-215ENST00000565442 CHMP4BP1P59074 171 aa6.84□□□□□ -1.31
CHD9-215ENST00000565442 CAP1Q01518 475 aa6.84□□□□□ -1.31
CHD9-215ENST00000565442 KIR3DS1Q14943 382 aa6.84□□□□□ -1.31
CHD9-215ENST00000565442 PPP2R5EQ16537 467 aa6.84□□□□□ -1.31
CHD9-215ENST00000565442 BBS9Q3SYG4 887 aa6.84□□□□□ -1.31
CHD9-215ENST00000565442 HSF5Q4G112 596 aaPredicted RBP6.84□□□□□ -1.31
CHD9-215ENST00000565442 ARSHQ5FYA8 562 aa6.84□□□□□ -1.31
CHD9-215ENST00000565442 ZPBP2Q6X784 338 aa6.84□□□□□ -1.31
CHD9-215ENST00000565442 DPH6Q7L8W6 267 aa6.84□□□□□ -1.31
CHD9-215ENST00000565442 PHACTR4Q8IZ21 702 aa6.84□□□□□ -1.31
CHD9-215ENST00000565442 OR6P1Q8NGX9 317 aa6.84□□□□□ -1.31
CHD9-215ENST00000565442 ATG4CQ96DT6 458 aa6.84□□□□□ -1.31
CHD9-215ENST00000565442 LNPKQ9C0E8 428 aa6.84□□□□□ -1.31
CHD9-215ENST00000565442 R3HCC1Q9Y3T6 440 aaKnown RBP6.84□□□□□ -1.31
CHD9-215ENST00000565442 TAF6LQ9Y6J9 622 aa6.84□□□□□ -1.31
CHD9-215ENST00000565442 FAM86C2PA6NEL3 165 aa6.83□□□□□ -1.32
CHD9-215ENST00000565442 FADS2P1A8MWK0 482 aa6.83□□□□□ -1.32
CHD9-215ENST00000565442 SYPP08247 313 aa6.83□□□□□ -1.32
CHD9-215ENST00000565442 RAG1P15918 1043 aa6.83□□□□□ -1.32
CHD9-215ENST00000565442 NCKAP1LP55160 1127 aa6.83□□□□□ -1.32
CHD9-215ENST00000565442 LAPTM5Q13571 262 aa6.83□□□□□ -1.32
CHD9-215ENST00000565442 NLRC3Q7RTR2 1065 aa6.83□□□□□ -1.32
CHD9-215ENST00000565442 FCRL2Q96LA5 508 aaPredicted RBP6.83□□□□□ -1.32
CHD9-215ENST00000565442 KIF2CQ99661 725 aa6.83□□□□□ -1.32
CHD9-215ENST00000565442 TM9SF2Q99805 663 aa6.83□□□□□ -1.32
CHD9-215ENST00000565442 TNFRSF10DQ9UBN6 386 aa6.83□□□□□ -1.32
CHD9-215ENST00000565442 WTIPA6NIX2 430 aaPredicted RBP6.82□□□□□ -1.32
CHD9-215ENST00000565442 NUDT19A8MXV4 375 aa6.82□□□□□ -1.32
CHD9-215ENST00000565442 KLF4O43474 513 aa6.82□□□□□ -1.32
CHD9-215ENST00000565442 NME1P15531 152 aaKnown RBP6.82□□□□□ -1.32
CHD9-215ENST00000565442 GUCY2CP25092 1073 aa6.82□□□□□ -1.32
CHD9-215ENST00000565442 POLR2BP30876 1174 aaKnown RBP6.82□□□□□ -1.32
CHD9-215ENST00000565442 ZNF827Q17R98 1081 aa6.82□□□□□ -1.32
CHD9-215ENST00000565442 TNNI3KQ59H18 835 aa6.82□□□□□ -1.32
CHD9-215ENST00000565442 TMC3Q7Z5M5 1100 aa6.82□□□□□ -1.32
CHD9-215ENST00000565442 TRIM55Q9BYV6 548 aa6.82□□□□□ -1.32
CHD9-215ENST00000565442 CNNM2Q9H8M5 875 aa6.82□□□□□ -1.32
CHD9-215ENST00000565442 TNFRSF12AQ9NP84 129 aa6.82□□□□□ -1.32
CHD9-215ENST00000565442 GPR55Q9Y2T6 319 aaPredicted RBP6.82□□□□□ -1.32
CHD9-215ENST00000565442 AKAP8O43823 692 aaKnown RBP6.81□□□□□ -1.32
CHD9-215ENST00000565442 ACRP10323 421 aa6.81□□□□□ -1.32
CHD9-215ENST00000565442 GBP1P32455 592 aa6.81□□□□□ -1.32
CHD9-215ENST00000565442 RNF4P78317 190 aa6.81□□□□□ -1.32
CHD9-215ENST00000565442 ZYXQ15942 572 aaKnown RBP6.81□□□□□ -1.32
CHD9-215ENST00000565442 CCDC144BQ3MJ40 725 aa6.81□□□□□ -1.32
CHD9-215ENST00000565442 UBXN11Q5T124 520 aa6.81□□□□□ -1.32
CHD9-215ENST00000565442 SOGA3Q5TF21 947 aa6.81□□□□□ -1.32
CHD9-215ENST00000565442 CDCP2Q5VXM1 449 aa6.81□□□□□ -1.32
CHD9-215ENST00000565442 NLGN1Q8N2Q7 840 aa6.81□□□□□ -1.32
CHD9-215ENST00000565442 SLC9A7Q96T83 725 aa6.81□□□□□ -1.32
CHD9-215ENST00000565442 ACTR10Q9NZ32 417 aa6.81□□□□□ -1.32
CHD9-215ENST00000565442 A0A1W2PQH9 124 aa6.8□□□□□ -1.32
CHD9-215ENST00000565442 SUV39H1O43463 412 aa6.8□□□□□ -1.32
CHD9-215ENST00000565442 PRKCAP17252 672 aa6.8□□□□□ -1.32
CHD9-215ENST00000565442 IGFBP6P24592 240 aaPredicted RBP6.8□□□□□ -1.32
CHD9-215ENST00000565442 LIMS1P48059 325 aa6.8□□□□□ -1.32
CHD9-215ENST00000565442 CYP4F8P98187 520 aa6.8□□□□□ -1.32
CHD9-215ENST00000565442 RAB33AQ14088 237 aa6.8□□□□□ -1.32
CHD9-215ENST00000565442 LARP1BQ659C4 914 aaKnown RBP6.8□□□□□ -1.32
CHD9-215ENST00000565442 RPTNQ6XPR3 784 aa6.8□□□□□ -1.32
CHD9-215ENST00000565442 UNC5AQ6ZN44 842 aa6.8□□□□□ -1.32
CHD9-215ENST00000565442 CELF2-AS1Q8N7Q2 184 aa6.8□□□□□ -1.32
CHD9-215ENST00000565442 ZSWIM4Q9H7M6 989 aa6.8□□□□□ -1.32
CHD9-215ENST00000565442 ST7Q9NRC1 585 aa6.8□□□□□ -1.32
CHD9-215ENST00000565442 IRS2Q9Y4H2 1338 aa6.79□□□□□ -1.32
CHD9-215ENST00000565442 LOC105371045A0A1W2PR82 267 aa6.79□□□□□ -1.32
CHD9-215ENST00000565442 TNFRSF10CO14798 259 aa6.79□□□□□ -1.32
CHD9-215ENST00000565442 RGS13O14921 159 aa6.79□□□□□ -1.32
CHD9-215ENST00000565442 TNFRSF1AP19438 455 aa6.79□□□□□ -1.32
CHD9-215ENST00000565442 MAGEA10P43363 369 aaPredicted RBP6.79□□□□□ -1.32
CHD9-215ENST00000565442 CASP7P55210 303 aa6.79□□□□□ -1.32
CHD9-215ENST00000565442 CBX2Q14781 532 aaPredicted RBP6.79□□□□□ -1.32
CHD9-215ENST00000565442 INTS3Q68E01 1043 aaKnown RBP6.79□□□□□ -1.32
CHD9-215ENST00000565442 SLCO6A1Q86UG4 719 aa6.79□□□□□ -1.32
CHD9-215ENST00000565442 TAB3Q8N5C8 712 aaPredicted RBP6.79□□□□□ -1.32
CHD9-215ENST00000565442 C19orf47Q8N9M1 422 aaKnown RBP6.79□□□□□ -1.32
CHD9-215ENST00000565442 OSBPL2Q9H1P3 480 aa6.79□□□□□ -1.32
CHD9-215ENST00000565442 USP40Q9NVE5 1235 aa6.79□□□□□ -1.32
CHD9-215ENST00000565442 CCDC85CA6NKD9 419 aa6.78□□□□□ -1.32
CHD9-215ENST00000565442 U2SURPO15042 1029 aaKnown RBP6.78□□□□□ -1.32
CHD9-215ENST00000565442 PFKLP17858 780 aa6.78□□□□□ -1.32
CHD9-215ENST00000565442 ZXDAP98168 799 aa6.78□□□□□ -1.32
CHD9-215ENST00000565442 SNW1Q13573 536 aaKnown RBP6.78□□□□□ -1.32
CHD9-215ENST00000565442 BMS1Q14692 1282 aaKnown RBP6.78□□□□□ -1.32
CHD9-215ENST00000565442 NBPF9Q3BBW0 867 aa6.78□□□□□ -1.32
CHD9-215ENST00000565442 PLEKHN1Q494U1 663 aaPredicted RBP6.78□□□□□ -1.32
CHD9-215ENST00000565442 VWA3BQ502W6 1294 aa6.78□□□□□ -1.32
CHD9-215ENST00000565442 NBPF6Q5VWK0 638 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms