RNA–Protein interactions for RNA: ENST00000565224.5

SMG1-210, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-210ENST00000565224 PAPD7Q5XG87 772 aaKnown RBP8.13□□□□□ -1.11
SMG1-210ENST00000565224 KIAA1328Q86T90 577 aa8.13□□□□□ -1.11
SMG1-210ENST00000565224 FAM114A1Q8IWE2 563 aa8.13□□□□□ -1.11
SMG1-210ENST00000565224 LINC00116Q8NCU8 138 aa8.13□□□□□ -1.11
SMG1-210ENST00000565224 GOLGA5Q8TBA6 731 aa8.13□□□□□ -1.11
SMG1-210ENST00000565224 CCDC47Q96A33 483 aaKnown RBP8.13□□□□□ -1.11
SMG1-210ENST00000565224 AK8Q96MA6 479 aa8.13□□□□□ -1.11
SMG1-210ENST00000565224 TUBGCP2Q9BSJ2 902 aa8.13□□□□□ -1.11
SMG1-210ENST00000565224 TTYH3Q9C0H2 523 aa8.13□□□□□ -1.11
SMG1-210ENST00000565224 ACBD3Q9H3P7 528 aa8.13□□□□□ -1.11
SMG1-210ENST00000565224 ZNHIT6Q9NWK9 470 aaKnown RBP8.13□□□□□ -1.11
SMG1-210ENST00000565224 MKRN1Q9UHC7 482 aaKnown RBP8.13□□□□□ -1.11
SMG1-210ENST00000565224 SAR1BQ9Y6B6 198 aa8.13□□□□□ -1.11
SMG1-210ENST00000565224 USP17L3A6NCW0 530 aa8.12□□□□□ -1.11
SMG1-210ENST00000565224 USP17L4A6NCW7 530 aa8.12□□□□□ -1.11
SMG1-210ENST00000565224 ENC1O14682 589 aa8.12□□□□□ -1.11
SMG1-210ENST00000565224 ZBTB22O15209 634 aa8.12□□□□□ -1.11
SMG1-210ENST00000565224 CYTH3O43739 400 aa8.12□□□□□ -1.11
SMG1-210ENST00000565224 KRT86O43790 486 aa8.12□□□□□ -1.11
SMG1-210ENST00000565224 ONECUT3O60422 494 aaPredicted RBP8.12□□□□□ -1.11
SMG1-210ENST00000565224 IPO7O95373 1038 aaKnown RBP8.12□□□□□ -1.11
SMG1-210ENST00000565224 ATP1A1P05023 1023 aaKnown RBP8.12□□□□□ -1.11
SMG1-210ENST00000565224 TSPY3P0CV98 308 aa8.12□□□□□ -1.11
SMG1-210ENST00000565224 TSPY8P0CW00 308 aa8.12□□□□□ -1.11
SMG1-210ENST00000565224 PLCG1P19174 1290 aa8.12□□□□□ -1.11
SMG1-210ENST00000565224 TRIM21P19474 475 aaKnown RBP8.12□□□□□ -1.11
SMG1-210ENST00000565224 CCNE1P24864 410 aa8.12□□□□□ -1.11
SMG1-210ENST00000565224 PPP1R2P41236 205 aa8.12□□□□□ -1.11
SMG1-210ENST00000565224 USP14P54578 494 aa8.12□□□□□ -1.11
SMG1-210ENST00000565224 CKAP4Q07065 602 aaKnown RBP8.12□□□□□ -1.11
SMG1-210ENST00000565224 HSP90B2PQ58FF3 399 aa8.12□□□□□ -1.11
SMG1-210ENST00000565224 TBC1D9BQ66K14 1250 aa8.12□□□□□ -1.11
SMG1-210ENST00000565224 USP17L1Q7RTZ2 530 aa8.12□□□□□ -1.11
SMG1-210ENST00000565224 CABP7Q86V35 215 aa8.12□□□□□ -1.11
SMG1-210ENST00000565224 AMOTL1Q8IY63 956 aa8.12□□□□□ -1.11
SMG1-210ENST00000565224 CCDC170Q8IYT3 715 aa8.12□□□□□ -1.11
SMG1-210ENST00000565224 FAM71BQ8TC56 605 aa8.12□□□□□ -1.11
SMG1-210ENST00000565224 LRRC15Q8TF66 581 aa8.12□□□□□ -1.11
SMG1-210ENST00000565224 P2RX5Q93086 422 aa8.12□□□□□ -1.11
SMG1-210ENST00000565224 JAKMIP2Q96AA8 810 aa8.12□□□□□ -1.11
SMG1-210ENST00000565224 DYNLL2Q96FJ2 89 aa8.12□□□□□ -1.11
SMG1-210ENST00000565224 RPGRIP1Q96KN7 1286 aa8.12□□□□□ -1.11
SMG1-210ENST00000565224 NLRP3Q96P20 1036 aa8.12□□□□□ -1.11
SMG1-210ENST00000565224 DUSP9Q99956 384 aaKnown RBP8.12□□□□□ -1.11
SMG1-210ENST00000565224 LZTS2Q9BRK4 669 aa8.12□□□□□ -1.11
SMG1-210ENST00000565224 NYXQ9GZU5 481 aa8.12□□□□□ -1.11
SMG1-210ENST00000565224 MKNK2Q9HBH9 465 aa8.12□□□□□ -1.11
SMG1-210ENST00000565224 TCP11L1Q9NUJ3 509 aa8.12□□□□□ -1.11
SMG1-210ENST00000565224 CWC15Q9P013 229 aaKnown RBP8.12□□□□□ -1.11
SMG1-210ENST00000565224 HDAC6Q9UBN7 1215 aa8.12□□□□□ -1.11
SMG1-210ENST00000565224 BAZ2BQ9UIF8 2168 aaKnown RBP8.12□□□□□ -1.11
SMG1-210ENST00000565224 JAG2Q9Y219 1238 aa8.12□□□□□ -1.11
SMG1-210ENST00000565224 FLT1P17948 1338 aa8.12□□□□□ -1.11
SMG1-210ENST00000565224 PALM3A6NDB9 673 aaPredicted RBP8.12□□□□□ -1.11
SMG1-210ENST00000565224 N4BP1O75113 896 aaKnown RBP8.12□□□□□ -1.11
SMG1-210ENST00000565224 OR52Z1P0C646 297 aa8.12□□□□□ -1.11
SMG1-210ENST00000565224 IRX5P78411 483 aaPredicted RBP8.12□□□□□ -1.11
SMG1-210ENST00000565224 ZBED6P86452 979 aa8.12□□□□□ -1.11
SMG1-210ENST00000565224 PDE4DQ08499 809 aa8.12□□□□□ -1.11
SMG1-210ENST00000565224 TBC1D8BQ0IIM8 1120 aa8.12□□□□□ -1.11
SMG1-210ENST00000565224 KRT25Q7Z3Z0 450 aa8.12□□□□□ -1.11
SMG1-210ENST00000565224 CNOT6LQ96LI5 555 aaKnown RBP8.12□□□□□ -1.11
SMG1-210ENST00000565224 TRIM9Q9C026 710 aa8.12□□□□□ -1.11
SMG1-210ENST00000565224 MED4Q9NPJ6 270 aa8.12□□□□□ -1.11
SMG1-210ENST00000565224 FAN1Q9Y2M0 1017 aa8.12□□□□□ -1.11
SMG1-210ENST00000565224 MYH8P13535 1937 aa8.11□□□□□ -1.11
SMG1-210ENST00000565224 TARSL2A2RTX5 802 aaKnown RBP8.11□□□□□ -1.11
SMG1-210ENST00000565224 RASSF10A6NK89 507 aa8.11□□□□□ -1.11
SMG1-210ENST00000565224 LRRIQ3A6PVS8 624 aaPredicted RBP8.11□□□□□ -1.11
SMG1-210ENST00000565224 EIF3CLB5ME19 914 aaKnown RBP8.11□□□□□ -1.11
SMG1-210ENST00000565224 ACTN2P35609 894 aa8.11□□□□□ -1.11
SMG1-210ENST00000565224 MTIF2P46199 727 aaKnown RBP8.11□□□□□ -1.11
SMG1-210ENST00000565224 ASIC1P78348 528 aa8.11□□□□□ -1.11
SMG1-210ENST00000565224 RAD51AP2Q09MP3 1159 aa8.11□□□□□ -1.11
SMG1-210ENST00000565224 TXNRD1Q16881 649 aa8.11□□□□□ -1.11
SMG1-210ENST00000565224 MAP9Q49MG5 647 aa8.11□□□□□ -1.11
SMG1-210ENST00000565224 TXNRD3Q86VQ6 643 aa8.11□□□□□ -1.11
SMG1-210ENST00000565224 ZNF444Q8N0Y2 327 aaPredicted RBP8.11□□□□□ -1.11
SMG1-210ENST00000565224 SH3RF3Q8TEJ3 882 aaPredicted RBP8.11□□□□□ -1.11
SMG1-210ENST00000565224 CCDC102AQ96A19 550 aa8.11□□□□□ -1.11
SMG1-210ENST00000565224 PCMTD1Q96MG8 357 aaPredicted RBP8.11□□□□□ -1.11
SMG1-210ENST00000565224 MMS19Q96T76 1030 aa8.11□□□□□ -1.11
SMG1-210ENST00000565224 EIF3CQ99613 913 aaKnown RBP8.11□□□□□ -1.11
SMG1-210ENST00000565224 C7orf25Q9BPX7 421 aa8.11□□□□□ -1.11
SMG1-210ENST00000565224 ZMYND12Q9H0C1 365 aa8.11□□□□□ -1.11
SMG1-210ENST00000565224 VIPAS39Q9H9C1 493 aa8.11□□□□□ -1.11
SMG1-210ENST00000565224 NHEJ1Q9H9Q4 299 aaPredicted RBP8.11□□□□□ -1.11
SMG1-210ENST00000565224 AGPAT5Q9NUQ2 364 aa8.11□□□□□ -1.11
SMG1-210ENST00000565224 TFR2Q9UP52 801 aa8.11□□□□□ -1.11
SMG1-210ENST00000565224 TAF1P21675 1872 aa8.11□□□□□ -1.11
SMG1-210ENST00000565224 MYH13Q9UKX3 1938 aa8.11□□□□□ -1.11
SMG1-210ENST00000565224 BRWD3Q6RI45 1802 aa8.11□□□□□ -1.11
SMG1-210ENST00000565224 COL5A3P25940 1745 aaPredicted RBP8.11□□□□□ -1.11
SMG1-210ENST00000565224 A0A1W2PQJ5 194 aa8.11□□□□□ -1.11
SMG1-210ENST00000565224 ANO9A1A5B4 782 aa8.11□□□□□ -1.11
SMG1-210ENST00000565224 KCNQ2O43526 872 aa8.11□□□□□ -1.11
SMG1-210ENST00000565224 CCNT1O60563 726 aaKnown RBP8.11□□□□□ -1.11
SMG1-210ENST00000565224 SRGAP2O75044 1071 aa8.11□□□□□ -1.11
SMG1-210ENST00000565224 LDHBP07195 334 aaKnown RBP8.11□□□□□ -1.11
SMG1-210ENST00000565224 KLK7P49862 253 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms