RNA–Protein interactions for RNA: ENST00000565160.5

BBS4-208, Transcript of Bardet-Biedl syndrome 4, human

TSL 3

Gene BBS4, Length 681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-208	ENST00000565160	MCM4	P33991	863 aa		6.28	□□□□□ -1.4
BBS4-208	ENST00000565160	CHRNA2	Q15822	529 aa		6.28	□□□□□ -1.4
BBS4-208	ENST00000565160	SLC6A19	Q695T7	634 aa		6.28	□□□□□ -1.4
BBS4-208	ENST00000565160	SLC51A	Q86UW1	340 aa		6.28	□□□□□ -1.4
BBS4-208	ENST00000565160	REXO1	Q8N1G1	1221 aa	Known RBP	6.28	□□□□□ -1.4
BBS4-208	ENST00000565160	TCP11L2	Q8N4U5	519 aa		6.28	□□□□□ -1.4
BBS4-208	ENST00000565160	MARCH10	Q8NA82	808 aa	Predicted RBP	6.28	□□□□□ -1.4
BBS4-208	ENST00000565160	RASGRP4	Q8TDF6	673 aa		6.28	□□□□□ -1.4
BBS4-208	ENST00000565160	XAGE3	Q8WTP9	111 aa		6.28	□□□□□ -1.4
BBS4-208	ENST00000565160	EHMT1	Q9H9B1	1298 aa		6.28	□□□□□ -1.4
BBS4-208	ENST00000565160	GINM1	Q9NU53	330 aa		6.28	□□□□□ -1.4
BBS4-208	ENST00000565160	USP35	Q9P2H5	1018 aa		6.28	□□□□□ -1.4
BBS4-208	ENST00000565160	KLHL3	Q9UH77	587 aa		6.28	□□□□□ -1.4
BBS4-208	ENST00000565160		U3KQE9	123 aa		6.28	□□□□□ -1.4
BBS4-208	ENST00000565160	CNTNAP4	Q9C0A0	1308 aa		6.27	□□□□□ -1.41
BBS4-208	ENST00000565160	EOMES	O95936	686 aa		6.27	□□□□□ -1.41
BBS4-208	ENST00000565160	ZNF165	P49910	485 aa		6.27	□□□□□ -1.41
BBS4-208	ENST00000565160	FAM214B	Q7L5A3	538 aa		6.27	□□□□□ -1.41
BBS4-208	ENST00000565160	WAPL	Q7Z5K2	1190 aa		6.27	□□□□□ -1.41
BBS4-208	ENST00000565160	FAM13C	Q8NE31	585 aa		6.27	□□□□□ -1.41
BBS4-208	ENST00000565160	RIN3	Q8TB24	985 aa		6.27	□□□□□ -1.41
BBS4-208	ENST00000565160	MIPEP	Q99797	713 aa		6.27	□□□□□ -1.41
BBS4-208	ENST00000565160	OSBPL1A	Q9BXW6	950 aa		6.27	□□□□□ -1.41
BBS4-208	ENST00000565160	ANTXR1	Q9H6X2	564 aa		6.27	□□□□□ -1.41
BBS4-208	ENST00000565160	ATG3	Q9NT62	314 aa		6.27	□□□□□ -1.41
BBS4-208	ENST00000565160	INPP5F	Q9Y2H2	1132 aa		6.27	□□□□□ -1.41
BBS4-208	ENST00000565160	TOGARAM1	Q9Y4F4	1720 aa		6.27	□□□□□ -1.41
BBS4-208	ENST00000565160	COL5A2	P05997	1499 aa	Predicted RBP	6.27	□□□□□ -1.41
BBS4-208	ENST00000565160	ADAMTS7	Q9UKP4	1686 aa		6.26	□□□□□ -1.41
BBS4-208	ENST00000565160	RANBP2	P49792	3224 aa	Known RBP	6.26	□□□□□ -1.41
BBS4-208	ENST00000565160	SLC22A31	A6NKX4	558 aa		6.26	□□□□□ -1.41
BBS4-208	ENST00000565160	HOXA10	P31260	410 aa	Predicted RBP	6.26	□□□□□ -1.41
BBS4-208	ENST00000565160	NPM2	Q86SE8	214 aa	Known RBP	6.26	□□□□□ -1.41
BBS4-208	ENST00000565160	MFSD2A	Q8NA29	543 aa		6.26	□□□□□ -1.41
BBS4-208	ENST00000565160	HEXIM2	Q96MH2	286 aa	Known RBP	6.26	□□□□□ -1.41
BBS4-208	ENST00000565160	TINF2	Q9BSI4	451 aa		6.26	□□□□□ -1.41
BBS4-208	ENST00000565160	PRDM11	Q9NQV5	511 aa		6.26	□□□□□ -1.41
BBS4-208	ENST00000565160	PPT2	Q9UMR5	302 aa		6.26	□□□□□ -1.41
BBS4-208	ENST00000565160	EFR3B	Q9Y2G0	817 aa		6.26	□□□□□ -1.41
BBS4-208	ENST00000565160	VCAN	P13611	3396 aa		6.26	□□□□□ -1.41
BBS4-208	ENST00000565160	KCP	Q6ZWJ8	1503 aa		6.25	□□□□□ -1.41
BBS4-208	ENST00000565160	MED26	O95402	600 aa		6.25	□□□□□ -1.41
BBS4-208	ENST00000565160	OVOS1	Q6IE37	1185 aa		6.25	□□□□□ -1.41
BBS4-208	ENST00000565160	CCDC81	Q6ZN84	652 aa		6.25	□□□□□ -1.41
BBS4-208	ENST00000565160	SLFN12	Q8IYM2	578 aa		6.25	□□□□□ -1.41
BBS4-208	ENST00000565160	GIMAP7	Q8NHV1	300 aa		6.25	□□□□□ -1.41
BBS4-208	ENST00000565160	PPP1R13L	Q8WUF5	828 aa		6.25	□□□□□ -1.41
BBS4-208	ENST00000565160	METTL22	Q9BUU2	404 aa	Predicted RBP	6.25	□□□□□ -1.41
BBS4-208	ENST00000565160	CAPN10	Q9HC96	672 aa		6.25	□□□□□ -1.41
BBS4-208	ENST00000565160	PIM2	Q9P1W9	311 aa		6.25	□□□□□ -1.41
BBS4-208	ENST00000565160	ZNRF3	Q9ULT6	936 aa		6.25	□□□□□ -1.41
BBS4-208	ENST00000565160	RNF112	Q9ULX5	631 aa		6.25	□□□□□ -1.41
BBS4-208	ENST00000565160	THRAP3	Q9Y2W1	955 aa	Known RBP	6.25	□□□□□ -1.41
BBS4-208	ENST00000565160	CENPF	P49454	3210 aa		6.24	□□□□□ -1.41
BBS4-208	ENST00000565160	UBR3	Q6ZT12	1888 aa		6.24	□□□□□ -1.41
BBS4-208	ENST00000565160	POLD1	P28340	1107 aa		6.24	□□□□□ -1.41
BBS4-208	ENST00000565160	SOX9	P48436	509 aa		6.24	□□□□□ -1.41
BBS4-208	ENST00000565160	NASP	P49321	788 aa	Predicted RBP	6.24	□□□□□ -1.41
BBS4-208	ENST00000565160	CYP27A1	Q02318	531 aa		6.24	□□□□□ -1.41
BBS4-208	ENST00000565160	ARSH	Q5FYA8	562 aa		6.24	□□□□□ -1.41
BBS4-208	ENST00000565160	DUSP27	Q5VZP5	1158 aa		6.24	□□□□□ -1.41
BBS4-208	ENST00000565160	LETMD1	Q6P1Q0	360 aa		6.24	□□□□□ -1.41
BBS4-208	ENST00000565160	CDH24	Q86UP0	819 aa		6.24	□□□□□ -1.41
BBS4-208	ENST00000565160	FAM181A	Q8N9Y4	354 aa		6.24	□□□□□ -1.41
BBS4-208	ENST00000565160	DNAJB8	Q8NHS0	232 aa		6.24	□□□□□ -1.41
BBS4-208	ENST00000565160	LRRC4C	Q9HCJ2	640 aa		6.24	□□□□□ -1.41
BBS4-208	ENST00000565160	GMIP	Q9P107	970 aa		6.24	□□□□□ -1.41
BBS4-208	ENST00000565160	LEMD3	Q9Y2U8	911 aa		6.24	□□□□□ -1.41
BBS4-208	ENST00000565160	BRCA2	P51587	3418 aa		6.24	□□□□□ -1.41
BBS4-208	ENST00000565160	THSD7B	Q9C0I4	1608 aa		6.24	□□□□□ -1.41
BBS4-208	ENST00000565160	SPTBN5	Q9NRC6	3674 aa	Known RBP	6.23	□□□□□ -1.41
BBS4-208	ENST00000565160	ANKRD30A	Q9BXX3	1397 aa		6.23	□□□□□ -1.41
BBS4-208	ENST00000565160	MEIS3P2	A8K0S8	358 aa		6.23	□□□□□ -1.41
BBS4-208	ENST00000565160	CYP26A1	O43174	497 aa		6.23	□□□□□ -1.41
BBS4-208	ENST00000565160	FOSL1	P15407	271 aa		6.23	□□□□□ -1.41
BBS4-208	ENST00000565160	YARS	P54577	528 aa	Known RBP	6.23	□□□□□ -1.41
BBS4-208	ENST00000565160	CPSF6	Q16630	551 aa	Known RBP eCLIP	6.23	□□□□□ -1.41
BBS4-208	ENST00000565160	CYP27C1	Q4G0S4	372 aa		6.23	□□□□□ -1.41
BBS4-208	ENST00000565160	BAHD1	Q8TBE0	780 aa	Predicted RBP	6.23	□□□□□ -1.41
BBS4-208	ENST00000565160	CYB5D2	Q8WUJ1	264 aa		6.23	□□□□□ -1.41
BBS4-208	ENST00000565160	TMEM40	Q8WWA1	233 aa		6.23	□□□□□ -1.41
BBS4-208	ENST00000565160	ATG4C	Q96DT6	458 aa		6.23	□□□□□ -1.41
BBS4-208	ENST00000565160	CD2AP	Q9Y5K6	639 aa		6.23	□□□□□ -1.41
BBS4-208	ENST00000565160	ANKRD50	Q9ULJ7	1429 aa		6.23	□□□□□ -1.41
BBS4-208	ENST00000565160	BRD4	O60885	1362 aa	Predicted RBP	6.22	□□□□□ -1.41
BBS4-208	ENST00000565160	ABCC11	Q96J66	1382 aa		6.22	□□□□□ -1.41
BBS4-208	ENST00000565160	ATF4	P18848	351 aa	Predicted RBP	6.22	□□□□□ -1.41
BBS4-208	ENST00000565160	POLR2B	P30876	1174 aa	Known RBP	6.22	□□□□□ -1.41
BBS4-208	ENST00000565160	LBX1	P52954	281 aa		6.22	□□□□□ -1.41
BBS4-208	ENST00000565160	COL9A2	Q14055	689 aa	Predicted RBP	6.22	□□□□□ -1.41
BBS4-208	ENST00000565160	ZMYM1	Q5SVZ6	1142 aa		6.22	□□□□□ -1.41
BBS4-208	ENST00000565160	CDCP2	Q5VXM1	449 aa		6.22	□□□□□ -1.41
BBS4-208	ENST00000565160	PMFBP1	Q8TBY8	1022 aa		6.22	□□□□□ -1.41
BBS4-208	ENST00000565160	SPATA32	Q96LK8	384 aa		6.22	□□□□□ -1.41
BBS4-208	ENST00000565160	FERD3L	Q96RJ6	166 aa		6.22	□□□□□ -1.41
BBS4-208	ENST00000565160	KIF2C	Q99661	725 aa		6.22	□□□□□ -1.41
BBS4-208	ENST00000565160	CNNM2	Q9H8M5	875 aa		6.22	□□□□□ -1.41
BBS4-208	ENST00000565160	ZC3H7B	Q9UGR2	993 aa	Known RBP	6.22	□□□□□ -1.41
BBS4-208	ENST00000565160	C5	P01031	1676 aa		6.22	□□□□□ -1.41
BBS4-208	ENST00000565160	CRB1	P82279	1406 aa		6.22	□□□□□ -1.41

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