RNA–Protein interactions for RNA: ENST00000564999.5

TCF4-225, Transcript of transcription factor 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene TCF4, Length 3,590 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-225ENST00000564999 ATP6V1E2Q96A05 226 aa8.12□□□□□ -1.11
TCF4-225ENST00000564999 ZNF700Q9H0M5 742 aa8.12□□□□□ -1.11
TCF4-225ENST00000564999 FBRSQ9HAH7 460 aa8.12□□□□□ -1.11
TCF4-225ENST00000564999 STIM2Q9P246 746 aa8.12□□□□□ -1.11
TCF4-225ENST00000564999 SPATA31A3Q5VYP0 1347 aa8.12□□□□□ -1.11
TCF4-225ENST00000564999 NEK4P51957 841 aa8.11□□□□□ -1.11
TCF4-225ENST00000564999 NAP1L1P55209 391 aaKnown RBP8.11□□□□□ -1.11
TCF4-225ENST00000564999 HSD17B7P56937 341 aa8.11□□□□□ -1.11
TCF4-225ENST00000564999 EIF4A1P60842 406 aaKnown RBP8.11□□□□□ -1.11
TCF4-225ENST00000564999 ERFEQ4G0M1 354 aa8.11□□□□□ -1.11
TCF4-225ENST00000564999 ARHGAP29Q52LW3 1261 aa8.11□□□□□ -1.11
TCF4-225ENST00000564999 EPM2AIP1Q7L775 607 aaPredicted RBP8.11□□□□□ -1.11
TCF4-225ENST00000564999 UHMK1Q8TAS1 419 aaKnown RBP8.11□□□□□ -1.11
TCF4-225ENST00000564999 GOLGA1Q92805 767 aa8.11□□□□□ -1.11
TCF4-225ENST00000564999 HERPUD2Q9BSE4 406 aa8.11□□□□□ -1.11
TCF4-225ENST00000564999 DESI2Q9BSY9 194 aa8.11□□□□□ -1.11
TCF4-225ENST00000564999 SRRTQ9BXP5 876 aaKnown RBP8.11□□□□□ -1.11
TCF4-225ENST00000564999 UPF3BQ9BZI7 483 aaKnown RBP8.11□□□□□ -1.11
TCF4-225ENST00000564999 VTA1Q9NP79 307 aa8.11□□□□□ -1.11
TCF4-225ENST00000564999 KDM4FA0A1W2PPD8 638 aa8.11□□□□□ -1.11
TCF4-225ENST00000564999 TOR1BO14657 336 aa8.11□□□□□ -1.11
TCF4-225ENST00000564999 EYA4O95677 639 aa8.11□□□□□ -1.11
TCF4-225ENST00000564999 POLR3DP05423 398 aaPredicted RBP8.11□□□□□ -1.11
TCF4-225ENST00000564999 PRKAR2AP13861 404 aaKnown RBP8.11□□□□□ -1.11
TCF4-225ENST00000564999 BCAMP50895 628 aa8.11□□□□□ -1.11
TCF4-225ENST00000564999 HEATR6Q6AI08 1181 aaKnown RBP8.11□□□□□ -1.11
TCF4-225ENST00000564999 SYDE1Q6ZW31 735 aaPredicted RBP8.11□□□□□ -1.11
TCF4-225ENST00000564999 STK11IPQ8N1F8 1099 aa8.11□□□□□ -1.11
TCF4-225ENST00000564999 SLC7A3Q8WY07 619 aa8.11□□□□□ -1.11
TCF4-225ENST00000564999 CCT6BQ92526 530 aa8.11□□□□□ -1.11
TCF4-225ENST00000564999 NINJ1Q92982 152 aa8.11□□□□□ -1.11
TCF4-225ENST00000564999 SMOC1Q9H4F8 434 aa8.11□□□□□ -1.11
TCF4-225ENST00000564999 LRRC4BQ9NT99 713 aa8.11□□□□□ -1.11
TCF4-225ENST00000564999 FBXO10Q9UK96 956 aa8.11□□□□□ -1.11
TCF4-225ENST00000564999 PPP1R9AQ9ULJ8 1098 aa8.11□□□□□ -1.11
TCF4-225ENST00000564999 AFG3L2Q9Y4W6 797 aa8.11□□□□□ -1.11
TCF4-225ENST00000564999 KCNA2P16389 499 aa8.11□□□□□ -1.11
TCF4-225ENST00000564999 SCTRP47872 440 aa8.11□□□□□ -1.11
TCF4-225ENST00000564999 AKAP4Q5JQC9 854 aa8.11□□□□□ -1.11
TCF4-225ENST00000564999 WDR45BQ5MNZ6 344 aa8.11□□□□□ -1.11
TCF4-225ENST00000564999 SH3PXD2AQ5TCZ1 1133 aa8.11□□□□□ -1.11
TCF4-225ENST00000564999 WWC2Q6AWC2 1192 aa8.11□□□□□ -1.11
TCF4-225ENST00000564999 IFNL2Q8IZJ0 200 aa8.11□□□□□ -1.11
TCF4-225ENST00000564999 RNF214Q8ND24 703 aa8.11□□□□□ -1.11
TCF4-225ENST00000564999 DDX54Q8TDD1 881 aaKnown RBP8.11□□□□□ -1.11
TCF4-225ENST00000564999 THAP3Q8WTV1 239 aaPredicted RBP8.11□□□□□ -1.11
TCF4-225ENST00000564999 ZNF496Q96IT1 587 aaPredicted RBP8.11□□□□□ -1.11
TCF4-225ENST00000564999 NGLY1Q96IV0 654 aa8.11□□□□□ -1.11
TCF4-225ENST00000564999 ZMAT2Q96NC0 199 aaKnown RBP8.11□□□□□ -1.11
TCF4-225ENST00000564999 RABL2AQ9UBK7 228 aaPredicted RBP8.11□□□□□ -1.11
TCF4-225ENST00000564999 PNMA3Q9UL41 463 aa8.11□□□□□ -1.11
TCF4-225ENST00000564999 MAGEB6P1A0A0J9YX57 407 aa8.1□□□□□ -1.11
TCF4-225ENST00000564999 FAM86C2PA6NEL3 165 aa8.1□□□□□ -1.11
TCF4-225ENST00000564999 CYP2E1P05181 493 aaPredicted RBP8.1□□□□□ -1.11
TCF4-225ENST00000564999 ZNF460Q14592 562 aa8.1□□□□□ -1.11
TCF4-225ENST00000564999 LLGL1Q15334 1064 aa8.1□□□□□ -1.11
TCF4-225ENST00000564999 CCDC30Q5VVM6 783 aa8.1□□□□□ -1.11
TCF4-225ENST00000564999 ZFPM2Q8WW38 1151 aa8.1□□□□□ -1.11
TCF4-225ENST00000564999 ALKBH8Q96BT7 664 aaKnown RBP8.1□□□□□ -1.11
TCF4-225ENST00000564999 NPHS2Q9NP85 383 aa8.1□□□□□ -1.11
TCF4-225ENST00000564999 SUCOQ9UBS9 1254 aaKnown RBP8.1□□□□□ -1.11
TCF4-225ENST00000564999 FOXD3Q9UJU5 478 aaPredicted RBP8.1□□□□□ -1.11
TCF4-225ENST00000564999 MRE11P49959 708 aa8.1□□□□□ -1.11
TCF4-225ENST00000564999 APPL2Q8NEU8 664 aa8.1□□□□□ -1.11
TCF4-225ENST00000564999 TAF4BQ92750 862 aa8.1□□□□□ -1.11
TCF4-225ENST00000564999 ABCG4Q9H172 646 aa8.1□□□□□ -1.11
TCF4-225ENST00000564999 FRMPD2Q68DX3 1309 aaPredicted RBP8.1□□□□□ -1.11
TCF4-225ENST00000564999 BTAF1O14981 1849 aa8.1□□□□□ -1.11
TCF4-225ENST00000564999 ABLIM3O94929 683 aa8.1□□□□□ -1.11
TCF4-225ENST00000564999 SLC4A1P02730 911 aa8.1□□□□□ -1.11
TCF4-225ENST00000564999 ATP1A3P13637 1013 aa8.1□□□□□ -1.11
TCF4-225ENST00000564999 SOX9P48436 509 aa8.1□□□□□ -1.11
TCF4-225ENST00000564999 STAT4Q14765 748 aa8.1□□□□□ -1.11
TCF4-225ENST00000564999 TTC22Q5TAA0 569 aa8.1□□□□□ -1.11
TCF4-225ENST00000564999 LRRC69Q6ZNQ3 347 aa8.1□□□□□ -1.11
TCF4-225ENST00000564999 ZCCHC17Q9NP64 241 aaKnown RBP8.1□□□□□ -1.11
TCF4-225ENST00000564999 PLAAQ9Y263 795 aa8.1□□□□□ -1.11
TCF4-225ENST00000564999 GOLGA6L6A8MZA4 724 aa8.09□□□□□ -1.11
TCF4-225ENST00000564999 CAPN3P20807 821 aa8.09□□□□□ -1.11
TCF4-225ENST00000564999 SLC6A19Q695T7 634 aa8.09□□□□□ -1.11
TCF4-225ENST00000564999 TBC1D1Q86TI0 1168 aaPredicted RBP8.09□□□□□ -1.11
TCF4-225ENST00000564999 LRRTM3Q86VH5 581 aa8.09□□□□□ -1.11
TCF4-225ENST00000564999 KCNH5Q8NCM2 988 aa8.09□□□□□ -1.11
TCF4-225ENST00000564999 UBR3Q6ZT12 1888 aa8.09□□□□□ -1.11
TCF4-225ENST00000564999 RASGRF1Q13972 1273 aa8.09□□□□□ -1.11
TCF4-225ENST00000564999 PRPF40BQ6NWY9 871 aaKnown RBP8.09□□□□□ -1.11
TCF4-225ENST00000564999 C16orf87Q6PH81 154 aa8.09□□□□□ -1.11
TCF4-225ENST00000564999 SHQ1Q6PI26 577 aaKnown RBP8.09□□□□□ -1.11
TCF4-225ENST00000564999 CHMP4CQ96CF2 233 aa8.09□□□□□ -1.11
TCF4-225ENST00000564999 USP20Q9Y2K6 914 aa8.09□□□□□ -1.11
TCF4-225ENST00000564999 ST18O60284 1047 aa8.09□□□□□ -1.12
TCF4-225ENST00000564999 SFSWAPQ12872 951 aaKnown RBP8.09□□□□□ -1.12
TCF4-225ENST00000564999 SEZ6Q53EL9 994 aa8.09□□□□□ -1.12
TCF4-225ENST00000564999 PKN3Q6P5Z2 889 aa8.09□□□□□ -1.12
TCF4-225ENST00000564999 IGF2-ASQ6U949 168 aa8.09□□□□□ -1.12
TCF4-225ENST00000564999 RNF19BQ6ZMZ0 732 aa8.09□□□□□ -1.12
TCF4-225ENST00000564999 GJD3Q8N144 294 aa8.09□□□□□ -1.12
TCF4-225ENST00000564999 GPR152Q8TDT2 470 aa8.09□□□□□ -1.12
TCF4-225ENST00000564999 MS4A3Q96HJ5 214 aa8.09□□□□□ -1.12
TCF4-225ENST00000564999 LGR4Q9BXB1 951 aa8.09□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms