RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 MORC2Q9Y6X9 1032 aaPredicted RBP3.76□□□□□ -1.81
CHD9-213ENST00000564845 LAMB4A4D0S4 1761 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 A0A1B0GUL6 1792 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 USP17L5A8MUK1 530 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 TSPY3P0CV98 308 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 TSPY8P0CW00 308 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 KRT85P78386 507 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 CYP2W1Q8TAV3 490 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 CEP95Q96GE4 821 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 MYCBPQ99417 103 aaPredicted RBP3.76□□□□□ -1.81
CHD9-213ENST00000564845 TACO1Q9BSH4 297 aaKnown RBP3.76□□□□□ -1.81
CHD9-213ENST00000564845 UBAC1Q9BSL1 405 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 RMND1Q9NWS8 449 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 UBE4BO95155 1302 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 UQCRHLA0A096LP55 91 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 GOLGA8TH3BQL2 631 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 UQCRHP07919 91 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 PFKFB1P16118 471 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 ZNF165P49910 485 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 FAM43AQ8N2R8 423 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 RDH13Q8NBN7 331 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 TMOD2Q9NZR1 351 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 IFNKQ9P0W0 207 aa3.76□□□□□ -1.81
CHD9-213ENST00000564845 RGS17Q9UGC6 210 aaPredicted RBP3.76□□□□□ -1.81
CHD9-213ENST00000564845 MRPL42Q9Y6G3 142 aaKnown RBP3.76□□□□□ -1.81
CHD9-213ENST00000564845 DDTLA6NHG4 134 aaPredicted RBP3.75□□□□□ -1.81
CHD9-213ENST00000564845 ZFYP08048 801 aaPredicted RBP3.75□□□□□ -1.81
CHD9-213ENST00000564845 MOB2Q70IA6 237 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 PHLDB2Q86SQ0 1253 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 CPXCR1Q8N123 301 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 CCDC110Q8TBZ0 833 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 RPGRIP1Q96KN7 1286 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 FGFBP2Q9BYJ0 223 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 SH2B1Q9NRF2 756 aaPredicted RBP3.75□□□□□ -1.81
CHD9-213ENST00000564845 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.75□□□□□ -1.814e-7■■■■□ 24.4
CHD9-213ENST00000564845 ITGB4P16144 1822 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 PNMA6AP0CW24 399 aaPredicted RBP3.75□□□□□ -1.81
CHD9-213ENST00000564845 TECP42680 631 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 RNASE9P60153 205 aaKnown RBP3.75□□□□□ -1.81
CHD9-213ENST00000564845 TPTE2Q6XPS3 522 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 CDK5RAP3Q96JB5 506 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 DCP1AQ9NPI6 582 aaPredicted RBP3.75□□□□□ -1.81
CHD9-213ENST00000564845 PHLPP1O60346 1717 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 RELNP78509 3460 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 OPA1O60313 960 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 CCNT1O60563 726 aaKnown RBP3.75□□□□□ -1.81
CHD9-213ENST00000564845 TXKP42681 527 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 KRT27Q7Z3Y8 459 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 TMC6Q7Z403 805 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 OTUD6BQ8N6M0 293 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 PIGSQ96S52 555 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 LDHCP07864 332 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 GNAQP50148 359 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 NCBP1Q09161 790 aaKnown RBP3.75□□□□□ -1.81
CHD9-213ENST00000564845 NBPF9Q3BBW0 867 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 KIAA1755Q5JYT7 1200 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 SH2D4BQ5SQS7 431 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 RBM43Q6ZSC3 357 aaKnown RBP3.75□□□□□ -1.81
CHD9-213ENST00000564845 NLGN2Q8NFZ4 835 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 LRRN2O75325 713 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 CLSTN1O94985 981 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 BMP6P22004 513 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 NLRP5P59047 1200 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 ARID5AQ03989 594 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 E2F4Q16254 413 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 SYDE2Q5VT97 1194 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 CNKSR2Q8WXI2 1034 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 CCDC39Q9UFE4 941 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 MYH13Q9UKX3 1938 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 ATP2A1O14983 1001 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 BRD2P25440 801 aaKnown RBP3.75□□□□□ -1.81
CHD9-213ENST00000564845 ATP5DP30049 168 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 GYS2P54840 703 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 LMNB2Q03252 620 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 DHX40Q8IX18 779 aaKnown RBP3.75□□□□□ -1.81
CHD9-213ENST00000564845 ZNF654Q8IZM8 581 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 EXOC4Q96A65 974 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 NUDT12Q9BQG2 462 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 TMEM60Q9H2L4 133 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 TRANK1O15050 2925 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 CYTH3O43739 400 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 EVI5O60447 810 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 ZNF202O95125 648 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 BRDTQ58F21 947 aaPredicted RBP3.75□□□□□ -1.81
CHD9-213ENST00000564845 GBP6Q6ZN66 633 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 SMARCC1Q92922 1105 aaPredicted RBP3.75□□□□□ -1.81
CHD9-213ENST00000564845 WNK4Q96J92 1243 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 PABPN1LA6NDY0 278 aaKnown RBP3.75□□□□□ -1.81
CHD9-213ENST00000564845 POTEMA6NI47 508 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 CCDC192P0DO97 292 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 CD44P16070 742 aaKnown RBP3.75□□□□□ -1.81
CHD9-213ENST00000564845 PMS1P54277 932 aaKnown RBP3.75□□□□□ -1.81
CHD9-213ENST00000564845 ZNF408Q9H9D4 720 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 SLC5A4Q9NY91 659 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 SMARCAL1Q9NZC9 954 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 MARCH6O60337 910 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 SOX10P56693 466 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 UBE2HP62256 183 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 DPYDQ12882 1025 aa3.75□□□□□ -1.81
CHD9-213ENST00000564845 CACTINQ8WUQ7 758 aaKnown RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms