RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 DCPSQ96C86 337 aaKnown RBP17.68■□□□□ 0.42
COMMD4-210ENST00000564587 L3MBTL3Q96JM7 780 aaPredicted RBP17.68■□□□□ 0.42
COMMD4-210ENST00000564587 NUP88Q99567 741 aaPredicted RBP17.68■□□□□ 0.42
COMMD4-210ENST00000564587 PICK1Q9NRD5 415 aa17.68■□□□□ 0.42
COMMD4-210ENST00000564587 ANO10Q9NW15 660 aa17.68■□□□□ 0.42
COMMD4-210ENST00000564587 DOCK1Q14185 1865 aa17.67■□□□□ 0.42
COMMD4-210ENST00000564587 FDX1P10109 184 aa17.67■□□□□ 0.42
COMMD4-210ENST00000564587 HIRAP54198 1017 aaPredicted RBP17.67■□□□□ 0.42
COMMD4-210ENST00000564587 NOL9Q5SY16 702 aaKnown RBP17.67■□□□□ 0.42
COMMD4-210ENST00000564587 USP50Q70EL3 339 aaPredicted RBP17.67■□□□□ 0.42
COMMD4-210ENST00000564587 SPICE1Q8N0Z3 855 aa17.67■□□□□ 0.42
COMMD4-210ENST00000564587 CNNM3Q8NE01 707 aa17.67■□□□□ 0.42
COMMD4-210ENST00000564587 FAM200AQ8TCP9 573 aa17.67■□□□□ 0.42
COMMD4-210ENST00000564587 AK8Q96MA6 479 aa17.67■□□□□ 0.42
COMMD4-210ENST00000564587 RANBP17Q9H2T7 1088 aaKnown RBP17.67■□□□□ 0.42
COMMD4-210ENST00000564587 KIAA1468Q9P260 1216 aa17.67■□□□□ 0.42
COMMD4-210ENST00000564587 VWA3AA6NCI4 1184 aa17.66■□□□□ 0.42
COMMD4-210ENST00000564587 ADAMTS3O15072 1205 aa17.66■□□□□ 0.42
COMMD4-210ENST00000564587 NEMFO60524 1076 aa17.66■□□□□ 0.42
COMMD4-210ENST00000564587 CCNT1O60563 726 aaKnown RBP17.66■□□□□ 0.42
COMMD4-210ENST00000564587 LETM2Q2VYF4 491 aa17.66■□□□□ 0.42
COMMD4-210ENST00000564587 PPP4R3AQ6IN85 833 aa17.66■□□□□ 0.42
COMMD4-210ENST00000564587 SULF1Q8IWU6 871 aa17.66■□□□□ 0.42
COMMD4-210ENST00000564587 ZC3H15Q8WU90 426 aaKnown RBP17.66■□□□□ 0.42
COMMD4-210ENST00000564587 NAT10Q9H0A0 1025 aaKnown RBP17.66■□□□□ 0.42
COMMD4-210ENST00000564587 MRVI1Q9Y6F6 885 aa17.66■□□□□ 0.42
COMMD4-210ENST00000564587 C19orf81C9J6K1 198 aa17.65■□□□□ 0.42
COMMD4-210ENST00000564587 WNT7AO00755 349 aa17.65■□□□□ 0.42
COMMD4-210ENST00000564587 OR52Z1P0C646 297 aa17.65■□□□□ 0.42
COMMD4-210ENST00000564587 USP11P51784 963 aa17.65■□□□□ 0.42
COMMD4-210ENST00000564587 CCDC173Q0VFZ6 552 aa17.65■□□□□ 0.42
COMMD4-210ENST00000564587 MOXD1Q6UVY6 613 aa17.65■□□□□ 0.42
COMMD4-210ENST00000564587 WRNIP1Q96S55 665 aa17.65■□□□□ 0.42
COMMD4-210ENST00000564587 MRPL11Q9Y3B7 192 aaKnown RBP17.65■□□□□ 0.42
COMMD4-210ENST00000564587 PIK3CDO00329 1044 aa17.64■□□□□ 0.41
COMMD4-210ENST00000564587 POLR2DO15514 142 aaKnown RBP17.64■□□□□ 0.41
COMMD4-210ENST00000564587 INPP5BP32019 993 aa17.64■□□□□ 0.41
COMMD4-210ENST00000564587 GRIN1Q05586 938 aa17.64■□□□□ 0.41
COMMD4-210ENST00000564587 KIAA1755Q5JYT7 1200 aa17.64■□□□□ 0.41
COMMD4-210ENST00000564587 IQUBQ8NA54 791 aa17.64■□□□□ 0.41
COMMD4-210ENST00000564587 PRPF38AQ8NAV1 312 aaKnown RBP17.64■□□□□ 0.41
COMMD4-210ENST00000564587 ZNF280CQ8ND82 737 aa17.64■□□□□ 0.41
COMMD4-210ENST00000564587 SYMPKQ92797 1274 aaKnown RBP17.64■□□□□ 0.41
COMMD4-210ENST00000564587 KLRG1Q96E93 195 aa17.64■□□□□ 0.41
COMMD4-210ENST00000564587 RAB34Q9BZG1 259 aa17.64■□□□□ 0.41
COMMD4-210ENST00000564587 TMEM260Q9NX78 707 aa17.64■□□□□ 0.41
COMMD4-210ENST00000564587 SCAF8Q9UPN6 1271 aaKnown RBP17.64■□□□□ 0.41
COMMD4-210ENST00000564587 ABCB11O95342 1321 aa17.64■□□□□ 0.41
COMMD4-210ENST00000564587 LONRF3Q496Y0 759 aa17.63■□□□□ 0.41
COMMD4-210ENST00000564587 ANO6Q4KMQ2 910 aa17.63■□□□□ 0.41
COMMD4-210ENST00000564587 CEP57L1Q8IYX8 460 aa17.63■□□□□ 0.41
COMMD4-210ENST00000564587 SAMD3Q8N6K7 520 aa17.63■□□□□ 0.41
COMMD4-210ENST00000564587 RNF214Q8ND24 703 aa17.63■□□□□ 0.41
COMMD4-210ENST00000564587 KIFC2Q96AC6 838 aa17.63■□□□□ 0.41
COMMD4-210ENST00000564587 C12orf42Q96LP6 360 aa17.63■□□□□ 0.41
COMMD4-210ENST00000564587 SLF1Q9BQI6 1058 aa17.63■□□□□ 0.41
COMMD4-210ENST00000564587 CCSER1Q9C0I3 900 aa17.63■□□□□ 0.41
COMMD4-210ENST00000564587 EHMT1Q9H9B1 1298 aa17.63■□□□□ 0.41
COMMD4-210ENST00000564587 CCDC39Q9UFE4 941 aa17.63■□□□□ 0.41
COMMD4-210ENST00000564587 TUBE1Q9UJT0 475 aa17.63■□□□□ 0.41
COMMD4-210ENST00000564587 IQCA1LA6NCM1 817 aa17.62■□□□□ 0.41
COMMD4-210ENST00000564587 SPDYE3A6NKU9 549 aa17.62■□□□□ 0.41
COMMD4-210ENST00000564587 PPP1R12BO60237 982 aaPredicted RBP17.62■□□□□ 0.41
COMMD4-210ENST00000564587 SLFN14P0C7P3 912 aa17.62■□□□□ 0.41
COMMD4-210ENST00000564587 PTPRAP18433 802 aa17.62■□□□□ 0.41
COMMD4-210ENST00000564587 BACE1P56817 501 aa17.62■□□□□ 0.41
COMMD4-210ENST00000564587 NLRP12P59046 1061 aa17.62■□□□□ 0.41
COMMD4-210ENST00000564587 ZYXQ15942 572 aaKnown RBP17.62■□□□□ 0.41
COMMD4-210ENST00000564587 TMEM266Q2M3C6 531 aa17.62■□□□□ 0.41
COMMD4-210ENST00000564587 SPECC1Q5M775 1068 aa17.62■□□□□ 0.41
COMMD4-210ENST00000564587 ANO3Q9BYT9 981 aa17.62■□□□□ 0.41
COMMD4-210ENST00000564587 GLIS2Q9BZE0 524 aaPredicted RBP17.62■□□□□ 0.41
COMMD4-210ENST00000564587 POLR2AP24928 1970 aaKnown RBP17.61■□□□□ 0.41
COMMD4-210ENST00000564587 GLTPD2A6NH11 291 aa17.61■□□□□ 0.41
COMMD4-210ENST00000564587 MEIS2O14770 477 aa17.61■□□□□ 0.41
COMMD4-210ENST00000564587 ACTN4O43707 911 aaKnown RBP17.61■□□□□ 0.41
COMMD4-210ENST00000564587 SMC2O95347 1197 aa17.61■□□□□ 0.41
COMMD4-210ENST00000564587 NF2P35240 595 aa17.61■□□□□ 0.41
COMMD4-210ENST00000564587 UBA7P41226 1012 aa17.61■□□□□ 0.41
COMMD4-210ENST00000564587 ZNF165P49910 485 aa17.61■□□□□ 0.41
COMMD4-210ENST00000564587 MAP3K9P80192 1104 aa17.61■□□□□ 0.41
COMMD4-210ENST00000564587 POSTNQ15063 836 aa17.61■□□□□ 0.41
COMMD4-210ENST00000564587 CALCRLQ16602 461 aa17.61■□□□□ 0.41
COMMD4-210ENST00000564587 UBE2SQ16763 222 aa17.61■□□□□ 0.41
COMMD4-210ENST00000564587 USH1GQ495M9 461 aa17.61■□□□□ 0.41
COMMD4-210ENST00000564587 TRIML1Q8N9V2 468 aa17.61■□□□□ 0.41
COMMD4-210ENST00000564587 RBM46Q8TBY0 533 aaKnown RBP17.61■□□□□ 0.41
COMMD4-210ENST00000564587 EPSTI1Q96J88 318 aa17.61■□□□□ 0.41
COMMD4-210ENST00000564587 TMEM60Q9H2L4 133 aa17.61■□□□□ 0.41
COMMD4-210ENST00000564587 CUEDC2Q9H467 287 aa17.61■□□□□ 0.41
COMMD4-210ENST00000564587 SERTAD1Q9UHV2 236 aa17.61■□□□□ 0.41
COMMD4-210ENST00000564587 CYP3A7-CYP3A51PA0A087WV96 503 aa17.6■□□□□ 0.41
COMMD4-210ENST00000564587 SLC26A4O43511 780 aa17.6■□□□□ 0.41
COMMD4-210ENST00000564587 ICAM1P05362 532 aa17.6■□□□□ 0.41
COMMD4-210ENST00000564587 CYP3A7P24462 503 aa17.6■□□□□ 0.41
COMMD4-210ENST00000564587 EPHX2P34913 555 aa17.6■□□□□ 0.41
COMMD4-210ENST00000564587 IREB2P48200 963 aaKnown RBP17.6■□□□□ 0.41
COMMD4-210ENST00000564587 FXR2P51116 673 aaKnown RBP eCLIP17.6■□□□□ 0.41
COMMD4-210ENST00000564587 MDM2Q00987 491 aaPredicted RBP17.6■□□□□ 0.41
COMMD4-210ENST00000564587 SPP2Q13103 211 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms