RNA–Protein interactions for RNA: ENST00000564584.1

CTU2-205, Transcript of cytosolic thiouridylase subunit 2, humanhuman

TSL 3

Gene CTU2, Length 896 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTU2-205ENST00000564584 RPS6KB1P23443 525 aa16.31■□□□□ 0.2
CTU2-205ENST00000564584 SLC4A3P48751 1232 aa16.31■□□□□ 0.2
CTU2-205ENST00000564584 EXOSC10Q01780 885 aaKnown RBP16.31■□□□□ 0.2
CTU2-205ENST00000564584 TLE2Q04725 743 aa16.31■□□□□ 0.2
CTU2-205ENST00000564584 WTAPQ15007 396 aa16.31■□□□□ 0.2
CTU2-205ENST00000564584 IFIT1BQ5T764 474 aaKnown RBP16.31■□□□□ 0.2
CTU2-205ENST00000564584 RUFY3Q7L099 469 aa16.31■□□□□ 0.2
CTU2-205ENST00000564584 CPXCR1Q8N123 301 aa16.31■□□□□ 0.2
CTU2-205ENST00000564584 BADQ92934 168 aa16.31■□□□□ 0.2
CTU2-205ENST00000564584 KIFC2Q96AC6 838 aa16.31■□□□□ 0.2
CTU2-205ENST00000564584 TBC1D32Q96NH3 1257 aa16.31■□□□□ 0.2
CTU2-205ENST00000564584 KAT14Q9H8E8 782 aa16.31■□□□□ 0.2
CTU2-205ENST00000564584 PDLIM7Q9NR12 457 aa16.31■□□□□ 0.2
CTU2-205ENST00000564584 FEM1BQ9UK73 627 aa16.31■□□□□ 0.2
CTU2-205ENST00000564584 RLFQ13129 1914 aa16.31■□□□□ 0.2
CTU2-205ENST00000564584 GREB1LQ9C091 1923 aaPredicted RBP16.31■□□□□ 0.2
CTU2-205ENST00000564584 A0A0G2JMZ2 1700 aa16.31■□□□□ 0.2
CTU2-205ENST00000564584 DNAJC25-GNG10A0A024R161 153 aa16.3■□□□□ 0.2
CTU2-205ENST00000564584 TRIM43BA6NCK2 446 aa16.3■□□□□ 0.2
CTU2-205ENST00000564584 LIFRP42702 1097 aa16.3■□□□□ 0.2
CTU2-205ENST00000564584 ANTXR2P58335 489 aa16.3■□□□□ 0.2
CTU2-205ENST00000564584 SHHQ15465 462 aa16.3■□□□□ 0.2
CTU2-205ENST00000564584 MAMDC4Q6UXC1 1216 aa16.3■□□□□ 0.2
CTU2-205ENST00000564584 SH3RF1Q7Z6J0 888 aa16.3■□□□□ 0.2
CTU2-205ENST00000564584 FBXL16Q8N461 479 aa16.3■□□□□ 0.2
CTU2-205ENST00000564584 ENAHQ8N8S7 591 aaPredicted RBP16.3■□□□□ 0.2
CTU2-205ENST00000564584 GMCL1P1Q8NEA9 526 aa16.3■□□□□ 0.2
CTU2-205ENST00000564584 TRIM43Q96BQ3 446 aaPredicted RBP16.3■□□□□ 0.2
CTU2-205ENST00000564584 ZKSCAN3Q9BRR0 538 aa16.3■□□□□ 0.2
CTU2-205ENST00000564584 SLC38A10Q9HBR0 1119 aa16.3■□□□□ 0.2
CTU2-205ENST00000564584 RAVER2Q9HCJ3 691 aaKnown RBP16.3■□□□□ 0.2
CTU2-205ENST00000564584 FAM184BQ9ULE4 1060 aa16.3■□□□□ 0.2
CTU2-205ENST00000564584 SYNGAP1Q96PV0 1343 aa16.29■□□□□ 0.2
CTU2-205ENST00000564584 NMT2O60551 498 aa16.29■□□□□ 0.2
CTU2-205ENST00000564584 SNAI1O95863 264 aaPredicted RBP16.29■□□□□ 0.2
CTU2-205ENST00000564584 RABEP1Q15276 862 aa16.29■□□□□ 0.2
CTU2-205ENST00000564584 ANKRD1Q15327 319 aa16.29■□□□□ 0.2
CTU2-205ENST00000564584 SEC23AQ15436 765 aa16.29■□□□□ 0.2
CTU2-205ENST00000564584 RCSD1Q6JBY9 416 aa16.29■□□□□ 0.2
CTU2-205ENST00000564584 SYNE3Q6ZMZ3 975 aa16.29■□□□□ 0.2
CTU2-205ENST00000564584 ZNF467Q7Z7K2 595 aaPredicted RBP16.29■□□□□ 0.2
CTU2-205ENST00000564584 IGDCC4Q8TDY8 1250 aa16.29■□□□□ 0.2
CTU2-205ENST00000564584 TMEM47Q9BQJ4 181 aa16.29■□□□□ 0.2
CTU2-205ENST00000564584 TSEN34Q9BSV6 310 aaKnown RBP16.29■□□□□ 0.2
CTU2-205ENST00000564584 ALDH8A1Q9H2A2 487 aaPredicted RBP16.29■□□□□ 0.2
CTU2-205ENST00000564584 A0A1W2PQ45 241 aaPredicted RBP16.28■□□□□ 0.2
CTU2-205ENST00000564584 A0A1W2PQY0 241 aa16.28■□□□□ 0.2
CTU2-205ENST00000564584 CCDC69A6NI79 296 aa16.28■□□□□ 0.2
CTU2-205ENST00000564584 SH2B2O14492 632 aaPredicted RBP16.28■□□□□ 0.2
CTU2-205ENST00000564584 ADAMTS4O75173 837 aa16.28■□□□□ 0.2
CTU2-205ENST00000564584 BMP3P12645 472 aa16.28■□□□□ 0.2
CTU2-205ENST00000564584 C9orf50Q5SZB4 431 aa16.28■□□□□ 0.2
CTU2-205ENST00000564584 SLFN13Q68D06 897 aa16.28■□□□□ 0.2
CTU2-205ENST00000564584 NFXL1Q6ZNB6 911 aa16.28■□□□□ 0.2
CTU2-205ENST00000564584 CHST3Q7LGC8 479 aa16.28■□□□□ 0.2
CTU2-205ENST00000564584 CATIPQ7Z7H3 387 aa16.28■□□□□ 0.2
CTU2-205ENST00000564584 SGMS1Q86VZ5 419 aa16.28■□□□□ 0.2
CTU2-205ENST00000564584 LRRC47Q8N1G4 583 aaKnown RBP16.28■□□□□ 0.2
CTU2-205ENST00000564584 ANKRD35Q8N283 1001 aa16.28■□□□□ 0.2
CTU2-205ENST00000564584 CHST13Q8NET6 341 aa16.28■□□□□ 0.2
CTU2-205ENST00000564584 LENG1Q96BZ8 264 aaPredicted RBP16.28■□□□□ 0.2
CTU2-205ENST00000564584 PDRG1Q9NUG6 133 aa16.28■□□□□ 0.2
CTU2-205ENST00000564584 FBXO40Q9UH90 709 aa16.28■□□□□ 0.2
CTU2-205ENST00000564584 ZHX1Q9UKY1 873 aaPredicted RBP16.28■□□□□ 0.2
CTU2-205ENST00000564584 CLTBP09497 229 aa16.27■□□□□ 0.2
CTU2-205ENST00000564584 CALM1P0DP23 149 aa16.27■□□□□ 0.2
CTU2-205ENST00000564584 CALM2P0DP24 149 aa16.27■□□□□ 0.2
CTU2-205ENST00000564584 CALM3P0DP25 149 aa16.27■□□□□ 0.2
CTU2-205ENST00000564584 FDX1P10109 184 aa16.27■□□□□ 0.2
CTU2-205ENST00000564584 ACLYP53396 1101 aa16.27■□□□□ 0.2
CTU2-205ENST00000564584 OAZ1P54368 228 aa16.27■□□□□ 0.2
CTU2-205ENST00000564584 ACVR2BQ13705 512 aa16.27■□□□□ 0.2
CTU2-205ENST00000564584 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.27■□□□□ 0.2
CTU2-205ENST00000564584 PNMA1Q8ND90 353 aa16.27■□□□□ 0.2
CTU2-205ENST00000564584 KLHDC9Q8NEP7 349 aa16.27■□□□□ 0.2
CTU2-205ENST00000564584 DCAF4Q8WV16 495 aa16.27■□□□□ 0.2
CTU2-205ENST00000564584 GMCL1Q96IK5 515 aa16.27■□□□□ 0.2
CTU2-205ENST00000564584 FAM161BQ96MY7 647 aa16.27■□□□□ 0.2
CTU2-205ENST00000564584 GUCD1Q96NT3 240 aa16.27■□□□□ 0.2
CTU2-205ENST00000564584 LY9Q9HBG7 655 aa16.27■□□□□ 0.2
CTU2-205ENST00000564584 LAMA2P24043 3122 aaKnown RBP16.26■□□□□ 0.19
CTU2-205ENST00000564584 MOXD2PA6NHM9 499 aa16.26■□□□□ 0.19
CTU2-205ENST00000564584 TMEM232C9JQI7 657 aa16.26■□□□□ 0.19
CTU2-205ENST00000564584 KIAA0355O15063 1070 aa16.26■□□□□ 0.19
CTU2-205ENST00000564584 PQBP1O60828 265 aaKnown RBP16.26■□□□□ 0.19
CTU2-205ENST00000564584 DUSP11O75319 330 aaKnown RBP16.26■□□□□ 0.19
CTU2-205ENST00000564584 DDAH1O94760 285 aa16.26■□□□□ 0.19
CTU2-205ENST00000564584 ITGB8P26012 769 aa16.26■□□□□ 0.19
CTU2-205ENST00000564584 SLC1A4P43007 532 aa16.26■□□□□ 0.19
CTU2-205ENST00000564584 RCAN1P53805 252 aa16.26■□□□□ 0.19
CTU2-205ENST00000564584 ZNF697Q5TEC3 545 aa16.26■□□□□ 0.19
CTU2-205ENST00000564584 Q6ZUG5 572 aa16.26■□□□□ 0.19
CTU2-205ENST00000564584 NUP133Q8WUM0 1156 aa16.26■□□□□ 0.19
CTU2-205ENST00000564584 TOX2Q96NM4 488 aa16.26■□□□□ 0.19
CTU2-205ENST00000564584 MAP3K14Q99558 947 aa16.26■□□□□ 0.19
CTU2-205ENST00000564584 UPF3BQ9BZI7 483 aaKnown RBP16.26■□□□□ 0.19
CTU2-205ENST00000564584 ABHD16BQ9H3Z7 469 aa16.26■□□□□ 0.19
CTU2-205ENST00000564584 PRDM6Q9NQX0 595 aa16.26■□□□□ 0.19
CTU2-205ENST00000564584 STARD7Q9NQZ5 370 aa16.26■□□□□ 0.19
CTU2-205ENST00000564584 TMEM39AQ9NV64 488 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms