RNA–Protein interactions for RNA: ENST00000563419.5

NAE1-212, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 4

Gene NAE1, Length 649 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-212ENST00000563419 VTI1AQ96AJ9 217 aa23.22■■□□□ 1.31
NAE1-212ENST00000563419 ZKSCAN3Q9BRR0 538 aa23.22■■□□□ 1.31
NAE1-212ENST00000563419 TMEM39AQ9NV64 488 aa23.22■■□□□ 1.31
NAE1-212ENST00000563419 CYP39A1Q9NYL5 469 aa23.22■■□□□ 1.31
NAE1-212ENST00000563419 NEDD4P46934 1319 aa23.22■■□□□ 1.31
NAE1-212ENST00000563419 MOXD2PA6NHM9 499 aa23.21■■□□□ 1.31
NAE1-212ENST00000563419 GJA9P57773 515 aa23.21■■□□□ 1.31
NAE1-212ENST00000563419 GNASQ5JWF2 1037 aa23.21■■□□□ 1.31
NAE1-212ENST00000563419 TMEM63BQ5T3F8 832 aa23.21■■□□□ 1.31
NAE1-212ENST00000563419 SYDE2Q5VT97 1194 aa23.21■■□□□ 1.31
NAE1-212ENST00000563419 MFSD6Q6ZSS7 791 aa23.21■■□□□ 1.31
NAE1-212ENST00000563419 NUP133Q8WUM0 1156 aa23.21■■□□□ 1.31
NAE1-212ENST00000563419 UPF3AQ9H1J1 476 aaKnown RBP23.21■■□□□ 1.31
NAE1-212ENST00000563419 RANBP17Q9H2T7 1088 aaKnown RBP23.21■■□□□ 1.31
NAE1-212ENST00000563419 PDGFCQ9NRA1 345 aa23.21■■□□□ 1.31
NAE1-212ENST00000563419 ZMYM6O95789 1325 aa23.2■■□□□ 1.3
NAE1-212ENST00000563419 CTAGE5O15320 804 aa23.2■■□□□ 1.3
NAE1-212ENST00000563419 ICAM1P05362 532 aa23.2■■□□□ 1.3
NAE1-212ENST00000563419 RAG1P15918 1043 aa23.2■■□□□ 1.3
NAE1-212ENST00000563419 AAMPQ13685 434 aa23.2■■□□□ 1.3
NAE1-212ENST00000563419 FBXO16Q8IX29 292 aaPredicted RBP23.2■■□□□ 1.3
NAE1-212ENST00000563419 TCP11L1Q9NUJ3 509 aa23.2■■□□□ 1.3
NAE1-212ENST00000563419 ASB14A6NK59 587 aa23.19■■□□□ 1.3
NAE1-212ENST00000563419 NFIBO00712 420 aa23.19■■□□□ 1.3
NAE1-212ENST00000563419 KIAA0355O15063 1070 aa23.19■■□□□ 1.3
NAE1-212ENST00000563419 PDHBP11177 359 aa23.19■■□□□ 1.3
NAE1-212ENST00000563419 CST5P28325 142 aaPredicted RBP23.19■■□□□ 1.3
NAE1-212ENST00000563419 TNFAIP2Q03169 654 aa23.19■■□□□ 1.3
NAE1-212ENST00000563419 BAATQ14032 418 aaPredicted RBP23.19■■□□□ 1.3
NAE1-212ENST00000563419 BTNL9Q6UXG8 535 aa23.19■■□□□ 1.3
NAE1-212ENST00000563419 ANKRD33Q7Z3H0 272 aa23.19■■□□□ 1.3
NAE1-212ENST00000563419 GLT1D1Q96MS3 346 aa23.19■■□□□ 1.3
NAE1-212ENST00000563419 OSBPL3Q9H4L5 887 aa23.19■■□□□ 1.3
NAE1-212ENST00000563419 SPC25Q9HBM1 224 aa23.19■■□□□ 1.3
NAE1-212ENST00000563419 LCTP09848 1927 aa23.19■■□□□ 1.3
NAE1-212ENST00000563419 DCDC2CA8MYV0 355 aa23.18■■□□□ 1.3
NAE1-212ENST00000563419 PCSK9Q8NBP7 692 aaKnown RBP23.18■■□□□ 1.3
NAE1-212ENST00000563419 CPVLQ9H3G5 476 aa23.18■■□□□ 1.3
NAE1-212ENST00000563419 LRRC37A2A6NM11 1700 aa23.17■■□□□ 1.3
NAE1-212ENST00000563419 GOLGA8HP0CJ92 632 aa23.17■■□□□ 1.3
NAE1-212ENST00000563419 SMPD1P17405 629 aa23.17■■□□□ 1.3
NAE1-212ENST00000563419 TICAM2Q86XR7 235 aa23.17■■□□□ 1.3
NAE1-212ENST00000563419 TOX2Q96NM4 488 aa23.17■■□□□ 1.3
NAE1-212ENST00000563419 GUCD1Q96NT3 240 aa23.17■■□□□ 1.3
NAE1-212ENST00000563419 DIAPH3Q9NSV4 1193 aa23.17■■□□□ 1.3
NAE1-212ENST00000563419 GNEQ9Y223 722 aaKnown RBP23.17■■□□□ 1.3
NAE1-212ENST00000563419 ZNF213O14771 459 aa23.16■■□□□ 1.3
NAE1-212ENST00000563419 DYNC1LI2O43237 492 aaPredicted RBP23.16■■□□□ 1.3
NAE1-212ENST00000563419 MFAP1P55081 439 aaKnown RBP23.16■■□□□ 1.3
NAE1-212ENST00000563419 ZNF543Q08ER8 600 aa23.16■■□□□ 1.3
NAE1-212ENST00000563419 TAPT1Q6NXT6 567 aa23.16■■□□□ 1.3
NAE1-212ENST00000563419 SLC30A10Q6XR72 485 aa23.16■■□□□ 1.3
NAE1-212ENST00000563419 TLK2Q86UE8 772 aa23.16■■□□□ 1.3
NAE1-212ENST00000563419 STXBP5LQ9Y2K9 1186 aa23.16■■□□□ 1.3
NAE1-212ENST00000563419 ELP1O95163 1332 aa23.15■■□□□ 1.3
NAE1-212ENST00000563419 A0A0U1RQG5 324 aaPredicted RBP23.15■■□□□ 1.3
NAE1-212ENST00000563419 PTPDC1A2A3K4 754 aa23.15■■□□□ 1.3
NAE1-212ENST00000563419 CDK7P50613 346 aa23.15■■□□□ 1.3
NAE1-212ENST00000563419 CXCL17Q6UXB2 119 aa23.15■■□□□ 1.3
NAE1-212ENST00000563419 ESR2Q92731 530 aa23.15■■□□□ 1.3
NAE1-212ENST00000563419 UBA5Q9GZZ9 404 aa23.15■■□□□ 1.3
NAE1-212ENST00000563419 IL25Q9H293 177 aa23.15■■□□□ 1.3
NAE1-212ENST00000563419 TBX21Q9UL17 535 aa23.15■■□□□ 1.3
NAE1-212ENST00000563419 SUPT16HQ9Y5B9 1047 aaKnown RBP23.15■■□□□ 1.3
NAE1-212ENST00000563419 EYSQ5T1H1 3165 aa23.14■■□□□ 1.3
NAE1-212ENST00000563419 ARVCFO00192 962 aa23.14■■□□□ 1.29
NAE1-212ENST00000563419 KDM4AO75164 1064 aa23.14■■□□□ 1.29
NAE1-212ENST00000563419 CALML3P27482 149 aa23.14■■□□□ 1.29
NAE1-212ENST00000563419 IRX6P78412 446 aaPredicted RBP23.14■■□□□ 1.29
NAE1-212ENST00000563419 FPGSQ05932 587 aa23.14■■□□□ 1.29
NAE1-212ENST00000563419 CLEC4DQ8WXI8 215 aa23.14■■□□□ 1.29
NAE1-212ENST00000563419 RNPC3Q96LT9 517 aaKnown RBP23.14■■□□□ 1.29
NAE1-212ENST00000563419 RNF41Q9H4P4 317 aaPredicted RBP23.14■■□□□ 1.29
NAE1-212ENST00000563419 UNC80Q8N2C7 3258 aa23.13■■□□□ 1.29
NAE1-212ENST00000563419 B4E1Z4 1266 aa23.13■■□□□ 1.29
NAE1-212ENST00000563419 TIMP1P01033 207 aa23.13■■□□□ 1.29
NAE1-212ENST00000563419 SNHG28P0DPA3 235 aa23.13■■□□□ 1.29
NAE1-212ENST00000563419 PDE4AP27815 886 aa23.13■■□□□ 1.29
NAE1-212ENST00000563419 ALDH5A1P51649 535 aaPredicted RBP23.13■■□□□ 1.29
NAE1-212ENST00000563419 FSCN1Q16658 493 aaKnown RBP23.13■■□□□ 1.29
NAE1-212ENST00000563419 ZNF697Q5TEC3 545 aa23.13■■□□□ 1.29
NAE1-212ENST00000563419 FAM109BQ6ICB4 259 aaPredicted RBP23.13■■□□□ 1.29
NAE1-212ENST00000563419 KIAA1211Q6ZU35 1233 aa23.13■■□□□ 1.29
NAE1-212ENST00000563419 TTC14Q96N46 770 aa23.13■■□□□ 1.29
NAE1-212ENST00000563419 PPP1R12CQ9BZL4 782 aa23.13■■□□□ 1.29
NAE1-212ENST00000563419 AP5M1Q9H0R1 490 aa23.13■■□□□ 1.29
NAE1-212ENST00000563419 PCP11498 1178 aaKnown RBP23.12■■□□□ 1.29
NAE1-212ENST00000563419 USH1GQ495M9 461 aa23.12■■□□□ 1.29
NAE1-212ENST00000563419 FAM126BQ8IXS8 530 aa23.12■■□□□ 1.29
NAE1-212ENST00000563419 PSMC6P62333 389 aa23.11■■□□□ 1.29
NAE1-212ENST00000563419 NKX3-2P78367 333 aa23.11■■□□□ 1.29
NAE1-212ENST00000563419 IQSEC1Q6DN90 963 aa23.11■■□□□ 1.29
NAE1-212ENST00000563419 MORC4Q8TE76 937 aa23.11■■□□□ 1.29
NAE1-212ENST00000563419 VTA1Q9NP79 307 aa23.11■■□□□ 1.29
NAE1-212ENST00000563419 GRIN2DO15399 1336 aa23.1■■□□□ 1.29
NAE1-212ENST00000563419 LAMA4Q16363 1823 aa23.1■■□□□ 1.29
NAE1-212ENST00000563419 CDH23Q9H251 3354 aa23.1■■□□□ 1.29
NAE1-212ENST00000563419 RNF207Q6ZRF8 634 aa23.1■■□□□ 1.29
NAE1-212ENST00000563419 PNMA1Q8ND90 353 aa23.1■■□□□ 1.29
NAE1-212ENST00000563419 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.1■■□□□ 1.294e-8■■■■■ 33.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms