RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 SEPHS1P49903 392 aa7.5□□□□□ -1.21
LINC00254-201ENST00000563416 MLANAQ16655 118 aa7.5□□□□□ -1.21
LINC00254-201ENST00000563416 DDR2Q16832 855 aa7.5□□□□□ -1.21
LINC00254-201ENST00000563416 DPY19L1Q2PZI1 675 aa7.5□□□□□ -1.21
LINC00254-201ENST00000563416 TIGD5Q53EQ6 642 aa7.5□□□□□ -1.21
LINC00254-201ENST00000563416 RCSD1Q6JBY9 416 aa7.5□□□□□ -1.21
LINC00254-201ENST00000563416 JAMLQ86YT9 394 aa7.5□□□□□ -1.21
LINC00254-201ENST00000563416 KSR1Q8IVT5 923 aa7.5□□□□□ -1.21
LINC00254-201ENST00000563416 ARMC5Q96C12 935 aa7.5□□□□□ -1.21
LINC00254-201ENST00000563416 YBX2Q9Y2T7 364 aaKnown RBP7.5□□□□□ -1.21
LINC00254-201ENST00000563416 EMC9Q9Y3B6 208 aa7.5□□□□□ -1.21
LINC00254-201ENST00000563416 BACE2Q9Y5Z0 518 aa7.5□□□□□ -1.21
LINC00254-201ENST00000563416 CUX1P39880 1505 aa7.49□□□□□ -1.21
LINC00254-201ENST00000563416 A0A1W2PQ27 194 aa7.49□□□□□ -1.21
LINC00254-201ENST00000563416 A0A1W2PQ64 194 aa7.49□□□□□ -1.21
LINC00254-201ENST00000563416 A0A1W2PQC6 194 aa7.49□□□□□ -1.21
LINC00254-201ENST00000563416 A0A1W2PQD8 194 aa7.49□□□□□ -1.21
LINC00254-201ENST00000563416 STXBP3O00186 592 aa7.49□□□□□ -1.21
LINC00254-201ENST00000563416 FARP2O94887 1054 aaPredicted RBP7.49□□□□□ -1.21
LINC00254-201ENST00000563416 KCNH1O95259 989 aa7.49□□□□□ -1.21
LINC00254-201ENST00000563416 ARL4AP40617 200 aa7.49□□□□□ -1.21
LINC00254-201ENST00000563416 RBM10P98175 930 aaKnown RBP7.49□□□□□ -1.21
LINC00254-201ENST00000563416 RAB33AQ14088 237 aa7.49□□□□□ -1.21
LINC00254-201ENST00000563416 HSF5Q4G112 596 aaPredicted RBP7.49□□□□□ -1.21
LINC00254-201ENST00000563416 OGFOD2Q6N063 350 aa7.49□□□□□ -1.21
LINC00254-201ENST00000563416 NLRX1Q86UT6 975 aa7.49□□□□□ -1.21
LINC00254-201ENST00000563416 IRF2BP1Q8IU81 584 aa7.49□□□□□ -1.21
LINC00254-201ENST00000563416 ZNF513Q8N8E2 541 aaPredicted RBP7.49□□□□□ -1.21
LINC00254-201ENST00000563416 INTS4Q96HW7 963 aaKnown RBP7.49□□□□□ -1.21
LINC00254-201ENST00000563416 PTCHD1Q96NR3 888 aa7.49□□□□□ -1.21
LINC00254-201ENST00000563416 HIRIP3Q9BW71 556 aaPredicted RBP7.49□□□□□ -1.21
LINC00254-201ENST00000563416 CRTAC1Q9NQ79 661 aa7.49□□□□□ -1.21
LINC00254-201ENST00000563416 ST7Q9NRC1 585 aa7.49□□□□□ -1.21
LINC00254-201ENST00000563416 TRBV23OR9-2A0A075B6M9 112 aa7.48□□□□□ -1.21
LINC00254-201ENST00000563416 C2orf71A6NGG8 1288 aa7.48□□□□□ -1.21
LINC00254-201ENST00000563416 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.48□□□□□ -1.21
LINC00254-201ENST00000563416 EIF4G3O43432 1585 aaKnown RBP7.48□□□□□ -1.21
LINC00254-201ENST00000563416 GTF2F1P35269 517 aaKnown RBP eCLIP7.48□□□□□ -1.21
LINC00254-201ENST00000563416 NBPF6Q5VWK0 638 aa7.48□□□□□ -1.21
LINC00254-201ENST00000563416 SLCO6A1Q86UG4 719 aa7.48□□□□□ -1.21
LINC00254-201ENST00000563416 TRIM59Q8IWR1 403 aa7.48□□□□□ -1.21
LINC00254-201ENST00000563416 MICAL1Q8TDZ2 1067 aa7.48□□□□□ -1.21
LINC00254-201ENST00000563416 NBPF4Q96M43 638 aa7.48□□□□□ -1.21
LINC00254-201ENST00000563416 NOTOA8MTQ0 251 aa7.47□□□□□ -1.21
LINC00254-201ENST00000563416 PDE6BP35913 854 aa7.47□□□□□ -1.21
LINC00254-201ENST00000563416 MRM1Q6IN84 353 aaKnown RBP7.47□□□□□ -1.21
LINC00254-201ENST00000563416 PRR23BQ6ZRT6 265 aa7.47□□□□□ -1.21
LINC00254-201ENST00000563416 POU5F2Q8N7G0 328 aa7.47□□□□□ -1.21
LINC00254-201ENST00000563416 CELF2-AS1Q8N7Q2 184 aa7.47□□□□□ -1.21
LINC00254-201ENST00000563416 DIRC2Q96SL1 478 aa7.47□□□□□ -1.21
LINC00254-201ENST00000563416 SLC38A3Q99624 504 aa7.47□□□□□ -1.21
LINC00254-201ENST00000563416 EPB41L4BQ9H329 900 aa7.47□□□□□ -1.21
LINC00254-201ENST00000563416 NSUN3Q9H649 340 aaKnown RBP7.47□□□□□ -1.21
LINC00254-201ENST00000563416 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.47□□□□□ -1.21
LINC00254-201ENST00000563416 TOP2BQ02880 1626 aa7.47□□□□□ -1.21
LINC00254-201ENST00000563416 POLA1P09884 1462 aaPredicted RBP7.47□□□□□ -1.21
LINC00254-201ENST00000563416 IFT140Q96RY7 1462 aa7.47□□□□□ -1.21
LINC00254-201ENST00000563416 PNLIPP16233 465 aa7.46□□□□□ -1.22
LINC00254-201ENST00000563416 PRKCAP17252 672 aa7.46□□□□□ -1.22
LINC00254-201ENST00000563416 LAPTM5Q13571 262 aa7.46□□□□□ -1.22
LINC00254-201ENST00000563416 SIRT2Q8IXJ6 389 aa7.46□□□□□ -1.22
LINC00254-201ENST00000563416 TMEM52Q8NDY8 209 aa7.46□□□□□ -1.22
LINC00254-201ENST00000563416 NUP43Q8NFH3 380 aa7.46□□□□□ -1.22
LINC00254-201ENST00000563416 SHISA4Q96DD7 197 aa7.46□□□□□ -1.22
LINC00254-201ENST00000563416 FAM84AQ96KN4 292 aa7.46□□□□□ -1.22
LINC00254-201ENST00000563416 JMJD8Q96S16 334 aa7.46□□□□□ -1.22
LINC00254-201ENST00000563416 MCMBPQ9BTE3 642 aa7.46□□□□□ -1.22
LINC00254-201ENST00000563416 DCP1AQ9NPI6 582 aaPredicted RBP7.46□□□□□ -1.22
LINC00254-201ENST00000563416 PBRM1Q86U86 1689 aa7.46□□□□□ -1.22
LINC00254-201ENST00000563416 SYNJ1O43426 1573 aa7.46□□□□□ -1.22
LINC00254-201ENST00000563416 FGD5Q6ZNL6 1462 aa7.45□□□□□ -1.22
LINC00254-201ENST00000563416 OR14I1A6ND48 311 aa7.45□□□□□ -1.22
LINC00254-201ENST00000563416 PAMP19021 973 aa7.45□□□□□ -1.22
LINC00254-201ENST00000563416 L1CAMP32004 1257 aa7.45□□□□□ -1.22
LINC00254-201ENST00000563416 CYP4F8P98187 520 aa7.45□□□□□ -1.22
LINC00254-201ENST00000563416 ADGRF1Q5T601 910 aa7.45□□□□□ -1.22
LINC00254-201ENST00000563416 GTF2IRD2BQ6EKJ0 949 aa7.45□□□□□ -1.22
LINC00254-201ENST00000563416 GTF2IRD2Q86UP8 949 aa7.45□□□□□ -1.22
LINC00254-201ENST00000563416 FBXO15Q8NCQ5 510 aaPredicted RBP7.45□□□□□ -1.22
LINC00254-201ENST00000563416 MRGPRX3Q96LB0 322 aa7.45□□□□□ -1.22
LINC00254-201ENST00000563416 PLCD4Q9BRC7 762 aa7.45□□□□□ -1.22
LINC00254-201ENST00000563416 CYP26B1Q9NR63 512 aa7.45□□□□□ -1.22
LINC00254-201ENST00000563416 IMPACTQ9P2X3 320 aa7.45□□□□□ -1.22
LINC00254-201ENST00000563416 ACSL6Q9UKU0 697 aa7.45□□□□□ -1.22
LINC00254-201ENST00000563416 A0A1W2PQJ5 194 aa7.44□□□□□ -1.22
LINC00254-201ENST00000563416 IQCA1LA6NCM1 817 aa7.44□□□□□ -1.22
LINC00254-201ENST00000563416 ITGAVP06756 1048 aa7.44□□□□□ -1.22
LINC00254-201ENST00000563416 CORO7P57737 925 aa7.44□□□□□ -1.22
LINC00254-201ENST00000563416 SCRN1Q12765 414 aa7.44□□□□□ -1.22
LINC00254-201ENST00000563416 SLC10A6Q3KNW5 377 aa7.44□□□□□ -1.22
LINC00254-201ENST00000563416 ZNF227Q86WZ6 799 aa7.44□□□□□ -1.22
LINC00254-201ENST00000563416 ST13P5Q8NFI4 369 aaPredicted RBP7.44□□□□□ -1.22
LINC00254-201ENST00000563416 CCDC140Q96MF4 163 aa7.44□□□□□ -1.22
LINC00254-201ENST00000563416 NKX2-4Q9H2Z4 354 aa7.44□□□□□ -1.22
LINC00254-201ENST00000563416 CHD1O14646 1710 aa7.44□□□□□ -1.22
LINC00254-201ENST00000563416 ZNF608Q9ULD9 1512 aaPredicted RBP7.43□□□□□ -1.22
LINC00254-201ENST00000563416 ABCA5Q8WWZ7 1642 aa7.43□□□□□ -1.22
LINC00254-201ENST00000563416 NPHP3-ACAD11A0A0J9YXS1 232 aa7.43□□□□□ -1.22
LINC00254-201ENST00000563416 HOXC12P31275 282 aa7.43□□□□□ -1.22
LINC00254-201ENST00000563416 CEBPAP49715 358 aaPredicted RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms