RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 TTBK2Q6IQ55 1244 aa24.76■■□□□ 1.55
CHD9-208ENST00000563410 LNPKQ9C0E8 428 aa24.76■■□□□ 1.55
CHD9-208ENST00000563410 CYP39A1Q9NYL5 469 aa24.76■■□□□ 1.55
CHD9-208ENST00000563410 TBX21Q9UL17 535 aa24.76■■□□□ 1.55
CHD9-208ENST00000563410 FPGSQ05932 587 aa24.75■■□□□ 1.55
CHD9-208ENST00000563410 CCDC96Q2M329 555 aa24.75■■□□□ 1.55
CHD9-208ENST00000563410 BTNL9Q6UXG8 535 aa24.75■■□□□ 1.55
CHD9-208ENST00000563410 TMEM47Q9BQJ4 181 aa24.75■■□□□ 1.55
CHD9-208ENST00000563410 RANBP17Q9H2T7 1088 aaKnown RBP24.75■■□□□ 1.55
CHD9-208ENST00000563410 TOMM22Q9NS69 142 aa24.75■■□□□ 1.55
CHD9-208ENST00000563410 TCP11L1Q9NUJ3 509 aa24.75■■□□□ 1.55
CHD9-208ENST00000563410 GNEQ9Y223 722 aaKnown RBP24.75■■□□□ 1.55
CHD9-208ENST00000563410 ICAM1P05362 532 aa24.74■■□□□ 1.55
CHD9-208ENST00000563410 SLC16A2P36021 539 aa24.74■■□□□ 1.55
CHD9-208ENST00000563410 BEX3Q00994 111 aa24.74■■□□□ 1.55
CHD9-208ENST00000563410 TNFAIP2Q03169 654 aa24.74■■□□□ 1.55
CHD9-208ENST00000563410 RRP12Q5JTH9 1297 aaKnown RBP24.74■■□□□ 1.55
CHD9-208ENST00000563410 RNPC3Q96LT9 517 aaKnown RBP24.74■■□□□ 1.55
CHD9-208ENST00000563410 SEMA6BQ9H3T3 888 aa24.74■■□□□ 1.55
CHD9-208ENST00000563410 CCPG1Q9ULG6 757 aa24.74■■□□□ 1.55
CHD9-208ENST00000563410 MROH7Q68CQ1 1323 aa24.74■■□□□ 1.55
CHD9-208ENST00000563410 LAMA4Q16363 1823 aa24.73■■□□□ 1.55
CHD9-208ENST00000563410 CCDC171Q6TFL3 1326 aa24.73■■□□□ 1.55
CHD9-208ENST00000563410 A0A0U1RQG5 324 aaPredicted RBP24.73■■□□□ 1.55
CHD9-208ENST00000563410 ARVCFO00192 962 aa24.73■■□□□ 1.55
CHD9-208ENST00000563410 TIMP1P01033 207 aa24.73■■□□□ 1.55
CHD9-208ENST00000563410 TOP1P11387 765 aaKnown RBP24.73■■□□□ 1.55
CHD9-208ENST00000563410 SMC5Q8IY18 1101 aa24.73■■□□□ 1.55
CHD9-208ENST00000563410 PURBQ96QR8 312 aaKnown RBP24.73■■□□□ 1.55
CHD9-208ENST00000563410 TTYH1Q9H313 450 aaPredicted RBP24.73■■□□□ 1.55
CHD9-208ENST00000563410 TRIM6-TRIM34B2RNG4 842 aa24.72■■□□□ 1.55
CHD9-208ENST00000563410 PTGS1P23219 599 aa24.72■■□□□ 1.55
CHD9-208ENST00000563410 HAND2P61296 217 aa24.72■■□□□ 1.55
CHD9-208ENST00000563410 TAPT1Q6NXT6 567 aa24.72■■□□□ 1.55
CHD9-208ENST00000563410 NSMFQ6X4W1 530 aa24.72■■□□□ 1.55
CHD9-208ENST00000563410 VTI1AQ96AJ9 217 aa24.72■■□□□ 1.55
CHD9-208ENST00000563410 CDX2Q99626 313 aaPredicted RBP24.72■■□□□ 1.55
CHD9-208ENST00000563410 PDGFCQ9NRA1 345 aa24.72■■□□□ 1.55
CHD9-208ENST00000563410 FRMPD2Q68DX3 1309 aaPredicted RBP24.71■■□□□ 1.55
CHD9-208ENST00000563410 SMPD1P17405 629 aa24.71■■□□□ 1.55
CHD9-208ENST00000563410 AAMPQ13685 434 aa24.71■■□□□ 1.55
CHD9-208ENST00000563410 SYDE2Q5VT97 1194 aa24.71■■□□□ 1.55
CHD9-208ENST00000563410 TLK2Q86UE8 772 aa24.71■■□□□ 1.55
CHD9-208ENST00000563410 FAM126BQ8IXS8 530 aa24.71■■□□□ 1.55
CHD9-208ENST00000563410 MORC4Q8TE76 937 aa24.71■■□□□ 1.55
CHD9-208ENST00000563410 RILPL2Q969X0 211 aa24.71■■□□□ 1.55
CHD9-208ENST00000563410 AKNAD1Q5T1N1 836 aa24.7■■□□□ 1.54
CHD9-208ENST00000563410 TMEM63BQ5T3F8 832 aa24.7■■□□□ 1.54
CHD9-208ENST00000563410 MFSD5Q6N075 450 aa24.7■■□□□ 1.54
CHD9-208ENST00000563410 NOL8Q76FK4 1167 aaKnown RBP24.7■■□□□ 1.54
CHD9-208ENST00000563410 EEPD1Q7L9B9 569 aa24.7■■□□□ 1.54
CHD9-208ENST00000563410 TBC1D10CQ8IV04 446 aa24.7■■□□□ 1.54
CHD9-208ENST00000563410 FBXO16Q8IX29 292 aaPredicted RBP24.7■■□□□ 1.54
CHD9-208ENST00000563410 GPCPD1Q9NPB8 672 aa24.7■■□□□ 1.54
CHD9-208ENST00000563410 CD4P01730 458 aa24.69■■□□□ 1.54
CHD9-208ENST00000563410 PDHBP11177 359 aa24.69■■□□□ 1.54
CHD9-208ENST00000563410 B4GALNT3Q6L9W6 998 aa24.69■■□□□ 1.54
CHD9-208ENST00000563410 CXCL17Q6UXB2 119 aa24.69■■□□□ 1.54
CHD9-208ENST00000563410 PLEKHM2Q8IWE5 1019 aa24.69■■□□□ 1.54
CHD9-208ENST00000563410 SLC43A3Q8NBI5 491 aa24.69■■□□□ 1.54
CHD9-208ENST00000563410 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.69■■□□□ 1.54
CHD9-208ENST00000563410 PRUNE2Q8WUY3 3088 aa24.68■■□□□ 1.54
CHD9-208ENST00000563410 NFIBO00712 420 aa24.68■■□□□ 1.54
CHD9-208ENST00000563410 IGHDP01880 384 aa24.68■■□□□ 1.54
CHD9-208ENST00000563410 SDSP20132 328 aa24.68■■□□□ 1.54
CHD9-208ENST00000563410 BAATQ14032 418 aaPredicted RBP24.68■■□□□ 1.54
CHD9-208ENST00000563410 IQSEC1Q6DN90 963 aa24.68■■□□□ 1.54
CHD9-208ENST00000563410 MFSD6Q6ZSS7 791 aa24.68■■□□□ 1.54
CHD9-208ENST00000563410 C16orf59Q7L2K0 433 aa24.68■■□□□ 1.54
CHD9-208ENST00000563410 TTC14Q96N46 770 aa24.68■■□□□ 1.54
CHD9-208ENST00000563410 RWDD1Q9H446 243 aaPredicted RBP24.68■■□□□ 1.54
CHD9-208ENST00000563410 OSBPL3Q9H4L5 887 aa24.68■■□□□ 1.54
CHD9-208ENST00000563410 MYO9BQ13459 2157 aa24.68■■□□□ 1.54
CHD9-208ENST00000563410 DYNC1LI2O43237 492 aaPredicted RBP24.67■■□□□ 1.54
CHD9-208ENST00000563410 SNHG28P0DPA3 235 aa24.67■■□□□ 1.54
CHD9-208ENST00000563410 PCP11498 1178 aaKnown RBP24.67■■□□□ 1.54
CHD9-208ENST00000563410 FSCN1Q16658 493 aaKnown RBP24.67■■□□□ 1.54
CHD9-208ENST00000563410 CHD1LQ86WJ1 897 aa24.67■■□□□ 1.54
CHD9-208ENST00000563410 AP5M1Q9H0R1 490 aa24.67■■□□□ 1.54
CHD9-208ENST00000563410 VTA1Q9NP79 307 aa24.67■■□□□ 1.54
CHD9-208ENST00000563410 Q9Y3F1 56 aa24.67■■□□□ 1.54
CHD9-208ENST00000563410 GRIN2DO15399 1336 aa24.66■■□□□ 1.54
CHD9-208ENST00000563410 NEDD4P46934 1319 aa24.66■■□□□ 1.54
CHD9-208ENST00000563410 TLR3O15455 904 aaKnown RBP24.66■■□□□ 1.54
CHD9-208ENST00000563410 CABYRO75952 493 aa24.66■■□□□ 1.54
CHD9-208ENST00000563410 CSF2RAP15509 400 aa24.66■■□□□ 1.54
CHD9-208ENST00000563410 ALDH5A1P51649 535 aaPredicted RBP24.66■■□□□ 1.54
CHD9-208ENST00000563410 ZNF543Q08ER8 600 aa24.66■■□□□ 1.54
CHD9-208ENST00000563410 TMEM240Q5SV17 173 aa24.66■■□□□ 1.54
CHD9-208ENST00000563410 CLEC4DQ8WXI8 215 aa24.66■■□□□ 1.54
CHD9-208ENST00000563410 PPP1R12CQ9BZL4 782 aa24.66■■□□□ 1.54
CHD9-208ENST00000563410 MYH6P13533 1939 aa24.66■■□□□ 1.54
CHD9-208ENST00000563410 TMEM265A0A087WTH1 108 aa24.65■■□□□ 1.54
CHD9-208ENST00000563410 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.65■■□□□ 1.54
CHD9-208ENST00000563410 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.65■■□□□ 1.54
CHD9-208ENST00000563410 VCANP13611 3396 aa24.65■■□□□ 1.54
CHD9-208ENST00000563410 NUCB1Q02818 461 aa24.65■■□□□ 1.54
CHD9-208ENST00000563410 PPIGQ13427 754 aaKnown RBP eCLIP24.65■■□□□ 1.54
CHD9-208ENST00000563410 KIAA1211Q6ZU35 1233 aa24.65■■□□□ 1.54
CHD9-208ENST00000563410 MYLIPQ8WY64 445 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms