RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 U2SURPO15042 1029 aaKnown RBP4.97□□□□□ -1.61
SHCBP1-202ENST00000563219 INHBBP09529 407 aa4.97□□□□□ -1.61
SHCBP1-202ENST00000563219 ENDOUP21128 410 aaKnown RBP4.97□□□□□ -1.61
SHCBP1-202ENST00000563219 BMP8BP34820 402 aa4.97□□□□□ -1.61
SHCBP1-202ENST00000563219 CTSKP43235 329 aa4.97□□□□□ -1.61
SHCBP1-202ENST00000563219 YBX1P67809 324 aaKnown RBP4.97□□□□□ -1.61
SHCBP1-202ENST00000563219 ZNF385BQ569K4 471 aa4.97□□□□□ -1.61
SHCBP1-202ENST00000563219 DCAF15Q66K64 600 aa4.97□□□□□ -1.61
SHCBP1-202ENST00000563219 MRM1Q6IN84 353 aaKnown RBP4.97□□□□□ -1.61
SHCBP1-202ENST00000563219 GALNT18Q6P9A2 607 aa4.97□□□□□ -1.61
SHCBP1-202ENST00000563219 PLCD4Q9BRC7 762 aa4.97□□□□□ -1.61
SHCBP1-202ENST00000563219 LNPKQ9C0E8 428 aa4.97□□□□□ -1.61
SHCBP1-202ENST00000563219 KLHL25Q9H0H3 589 aa4.97□□□□□ -1.61
SHCBP1-202ENST00000563219 CCDC113Q9H0I3 377 aa4.97□□□□□ -1.61
SHCBP1-202ENST00000563219 OSBPL2Q9H1P3 480 aa4.97□□□□□ -1.61
SHCBP1-202ENST00000563219 SIRT5Q9NXA8 310 aa4.97□□□□□ -1.61
SHCBP1-202ENST00000563219 SUSD2Q9UGT4 822 aa4.97□□□□□ -1.61
SHCBP1-202ENST00000563219 MBD1Q9UIS9 605 aaPredicted RBP4.97□□□□□ -1.61
SHCBP1-202ENST00000563219 FBXL21Q9UKT6 434 aa4.97□□□□□ -1.61
SHCBP1-202ENST00000563219 A0A087WZG4 1122 aa4.96□□□□□ -1.62
SHCBP1-202ENST00000563219 ANKRD34BA5PLL1 514 aa4.96□□□□□ -1.62
SHCBP1-202ENST00000563219 MEIS1O00470 390 aa4.96□□□□□ -1.62
SHCBP1-202ENST00000563219 DDAH1O94760 285 aa4.96□□□□□ -1.62
SHCBP1-202ENST00000563219 ZNF205O95201 554 aa4.96□□□□□ -1.62
SHCBP1-202ENST00000563219 TP53P04637 393 aaPredicted RBP4.96□□□□□ -1.62
SHCBP1-202ENST00000563219 EPHX1P07099 455 aa4.96□□□□□ -1.62
SHCBP1-202ENST00000563219 VAV1P15498 845 aa4.96□□□□□ -1.62
SHCBP1-202ENST00000563219 CD247P20963 164 aa4.96□□□□□ -1.62
SHCBP1-202ENST00000563219 VIPR1P32241 457 aa4.96□□□□□ -1.62
SHCBP1-202ENST00000563219 ERVFRD-1P60508 538 aa4.96□□□□□ -1.62
SHCBP1-202ENST00000563219 PMFBP1Q8TBY8 1022 aa4.96□□□□□ -1.62
SHCBP1-202ENST00000563219 EPN3Q9H201 632 aa4.96□□□□□ -1.62
SHCBP1-202ENST00000563219 GP6Q9HCN6 339 aa4.96□□□□□ -1.62
SHCBP1-202ENST00000563219 ST7Q9NRC1 585 aa4.96□□□□□ -1.62
SHCBP1-202ENST00000563219 ERVK13-1Q9NX77 482 aa4.96□□□□□ -1.62
SHCBP1-202ENST00000563219 GFOD1Q9NXC2 390 aa4.96□□□□□ -1.62
SHCBP1-202ENST00000563219 ZNF451Q9Y4E5 1061 aa4.96□□□□□ -1.62
SHCBP1-202ENST00000563219 FHOD1Q9Y613 1164 aa4.96□□□□□ -1.62
SHCBP1-202ENST00000563219 A0A1W2PQ45 241 aaPredicted RBP4.95□□□□□ -1.62
SHCBP1-202ENST00000563219 A0A1W2PQY0 241 aa4.95□□□□□ -1.62
SHCBP1-202ENST00000563219 RFXAPO00287 272 aa4.95□□□□□ -1.62
SHCBP1-202ENST00000563219 ABLIM1O14639 778 aa4.95□□□□□ -1.62
SHCBP1-202ENST00000563219 SUSD5O60279 629 aa4.95□□□□□ -1.62
SHCBP1-202ENST00000563219 MPOP05164 745 aa4.95□□□□□ -1.62
SHCBP1-202ENST00000563219 NAT2P11245 290 aa4.95□□□□□ -1.62
SHCBP1-202ENST00000563219 SDHBP21912 280 aa4.95□□□□□ -1.62
SHCBP1-202ENST00000563219 RASA3Q14644 834 aa4.95□□□□□ -1.62
SHCBP1-202ENST00000563219 SSPNQ14714 243 aa4.95□□□□□ -1.62
SHCBP1-202ENST00000563219 TCEAL1Q15170 157 aa4.95□□□□□ -1.62
SHCBP1-202ENST00000563219 HSF5Q4G112 596 aaPredicted RBP4.95□□□□□ -1.62
SHCBP1-202ENST00000563219 TCERG1LQ5VWI1 586 aa4.95□□□□□ -1.62
SHCBP1-202ENST00000563219 HEATR6Q6AI08 1181 aaKnown RBP4.95□□□□□ -1.62
SHCBP1-202ENST00000563219 DPH6Q7L8W6 267 aa4.95□□□□□ -1.62
SHCBP1-202ENST00000563219 EEPD1Q7L9B9 569 aa4.95□□□□□ -1.62
SHCBP1-202ENST00000563219 SLCO6A1Q86UG4 719 aa4.95□□□□□ -1.62
SHCBP1-202ENST00000563219 ZNF513Q8N8E2 541 aaPredicted RBP4.95□□□□□ -1.62
SHCBP1-202ENST00000563219 ZNF669Q96BR6 464 aaPredicted RBP4.95□□□□□ -1.62
SHCBP1-202ENST00000563219 SIGLEC10Q96LC7 697 aa4.95□□□□□ -1.62
SHCBP1-202ENST00000563219 CDADC1Q9BWV3 514 aa4.95□□□□□ -1.62
SHCBP1-202ENST00000563219 GBP3Q9H0R5 595 aa4.95□□□□□ -1.62
SHCBP1-202ENST00000563219 CNTD2Q9H8S5 307 aa4.95□□□□□ -1.62
SHCBP1-202ENST00000563219 PARD6AQ9NPB6 346 aa4.95□□□□□ -1.62
SHCBP1-202ENST00000563219 FAM86C1Q9NVL1 165 aa4.95□□□□□ -1.62
SHCBP1-202ENST00000563219 WHRNQ9P202 907 aa4.95□□□□□ -1.62
SHCBP1-202ENST00000563219 TAF6LQ9Y6J9 622 aa4.95□□□□□ -1.62
SHCBP1-202ENST00000563219 N4BP3O15049 544 aa4.94□□□□□ -1.62
SHCBP1-202ENST00000563219 PDPK1O15530 556 aa4.94□□□□□ -1.62
SHCBP1-202ENST00000563219 GSNP06396 782 aa4.94□□□□□ -1.62
SHCBP1-202ENST00000563219 ITGA4P13612 1032 aa4.94□□□□□ -1.62
SHCBP1-202ENST00000563219 PRKCAP17252 672 aa4.94□□□□□ -1.62
SHCBP1-202ENST00000563219 BMP7P18075 431 aa4.94□□□□□ -1.62
SHCBP1-202ENST00000563219 HOXA5P20719 270 aa4.94□□□□□ -1.62
SHCBP1-202ENST00000563219 ARL4AP40617 200 aa4.94□□□□□ -1.62
SHCBP1-202ENST00000563219 CEBPAP49715 358 aaPredicted RBP4.94□□□□□ -1.62
SHCBP1-202ENST00000563219 ZNF445P59923 1031 aa4.94□□□□□ -1.62
SHCBP1-202ENST00000563219 LAPTM5Q13571 262 aa4.94□□□□□ -1.62
SHCBP1-202ENST00000563219 RASGRF1Q13972 1273 aa4.94□□□□□ -1.62
SHCBP1-202ENST00000563219 KIR3DS1Q14943 382 aa4.94□□□□□ -1.62
SHCBP1-202ENST00000563219 NFE2L2Q16236 605 aa4.94□□□□□ -1.62
SHCBP1-202ENST00000563219 CCDC144BQ3MJ40 725 aa4.94□□□□□ -1.62
SHCBP1-202ENST00000563219 OLFML2BQ68BL8 750 aa4.94□□□□□ -1.62
SHCBP1-202ENST00000563219 TMEM151BQ8IW70 566 aa4.94□□□□□ -1.62
SHCBP1-202ENST00000563219 TMEM52Q8NDY8 209 aa4.94□□□□□ -1.62
SHCBP1-202ENST00000563219 ST13P5Q8NFI4 369 aaPredicted RBP4.94□□□□□ -1.62
SHCBP1-202ENST00000563219 PANK1Q8TE04 598 aa4.94□□□□□ -1.62
SHCBP1-202ENST00000563219 RCC1LQ96I51 464 aaKnown RBP4.94□□□□□ -1.62
SHCBP1-202ENST00000563219 C20orf173Q96LM9 149 aa4.94□□□□□ -1.62
SHCBP1-202ENST00000563219 DEPDC7Q96QD5 511 aa4.94□□□□□ -1.62
SHCBP1-202ENST00000563219 KLHL14Q9P2G3 628 aa4.94□□□□□ -1.62
SHCBP1-202ENST00000563219 ACSL6Q9UKU0 697 aa4.94□□□□□ -1.62
SHCBP1-202ENST00000563219 GPR55Q9Y2T6 319 aaPredicted RBP4.94□□□□□ -1.62
SHCBP1-202ENST00000563219 IRAK3Q9Y616 596 aa4.94□□□□□ -1.62
SHCBP1-202ENST00000563219 PRRG2O14669 202 aa4.93□□□□□ -1.62
SHCBP1-202ENST00000563219 PPM1BO75688 479 aa4.93□□□□□ -1.62
SHCBP1-202ENST00000563219 EPHB3P54753 998 aa4.93□□□□□ -1.62
SHCBP1-202ENST00000563219 CTSWP56202 376 aa4.93□□□□□ -1.62
SHCBP1-202ENST00000563219 CYP4F8P98187 520 aa4.93□□□□□ -1.62
SHCBP1-202ENST00000563219 SLC10A6Q3KNW5 377 aa4.93□□□□□ -1.62
SHCBP1-202ENST00000563219 RTP2Q5QGT7 225 aa4.93□□□□□ -1.62
SHCBP1-202ENST00000563219 CRTC3Q6UUV7 619 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms