RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, human

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CKLF-208	ENST00000563092	TFF2	Q03403	129 aa		10.01	□□□□□ -0.81
CKLF-208	ENST00000563092	AAK1	Q2M2I8	961 aa		10.01	□□□□□ -0.81
CKLF-208	ENST00000563092	SLFNL1	Q499Z3	407 aa		10.01	□□□□□ -0.81
CKLF-208	ENST00000563092	CTR9	Q6PD62	1173 aa		10.01	□□□□□ -0.81
CKLF-208	ENST00000563092	ARMCX2	Q7L311	632 aa		10.01	□□□□□ -0.81
CKLF-208	ENST00000563092	RHPN1	Q8TCX5	695 aa		10.01	□□□□□ -0.81
CKLF-208	ENST00000563092	DDX11	Q96FC9	970 aa		10.01	□□□□□ -0.81
CKLF-208	ENST00000563092	AGBL1	Q96MI9	1066 aa		10.01	□□□□□ -0.81
CKLF-208	ENST00000563092	NUP88	Q99567	741 aa	Predicted RBP	10.01	□□□□□ -0.81
CKLF-208	ENST00000563092	LRFN3	Q9BTN0	628 aa		10.01	□□□□□ -0.81
CKLF-208	ENST00000563092	HIPK3	Q9H422	1215 aa		10.01	□□□□□ -0.81
CKLF-208	ENST00000563092	NYAP2	Q9P242	653 aa		10.01	□□□□□ -0.81
CKLF-208	ENST00000563092	SYNPO2	Q9UMS6	1093 aa		10.01	□□□□□ -0.81
CKLF-208	ENST00000563092	EXOC6B	Q9Y2D4	811 aa		10.01	□□□□□ -0.81
CKLF-208	ENST00000563092	MTCH2	Q9Y6C9	303 aa		10.01	□□□□□ -0.81
CKLF-208	ENST00000563092	PIEZO1	Q92508	2521 aa		10	□□□□□ -0.81
CKLF-208	ENST00000563092	GBF1	Q92538	1859 aa		10	□□□□□ -0.81
CKLF-208	ENST00000563092	MYH8	P13535	1937 aa		10	□□□□□ -0.81
CKLF-208	ENST00000563092		F5H6K3	240 aa		10	□□□□□ -0.81
CKLF-208	ENST00000563092	TLL1	O43897	1013 aa		10	□□□□□ -0.81
CKLF-208	ENST00000563092	NDUFB10	O96000	172 aa		10	□□□□□ -0.81
CKLF-208	ENST00000563092	RASA1	P20936	1047 aa		10	□□□□□ -0.81
CKLF-208	ENST00000563092	KCNQ1	P51787	676 aa		10	□□□□□ -0.81
CKLF-208	ENST00000563092	RABGGTB	P53611	331 aa		10	□□□□□ -0.81
CKLF-208	ENST00000563092	KLRC3	Q07444	240 aa		10	□□□□□ -0.81
CKLF-208	ENST00000563092	UBE3C	Q15386	1083 aa		10	□□□□□ -0.81
CKLF-208	ENST00000563092	CXCL17	Q6UXB2	119 aa		10	□□□□□ -0.81
CKLF-208	ENST00000563092	OTOP2	Q7RTS6	562 aa		10	□□□□□ -0.81
CKLF-208	ENST00000563092	CCDC144CP	Q8IYA2	1237 aa		10	□□□□□ -0.81
CKLF-208	ENST00000563092	FAM133A	Q8N9E0	248 aa		10	□□□□□ -0.81
CKLF-208	ENST00000563092	CHST13	Q8NET6	341 aa		10	□□□□□ -0.81
CKLF-208	ENST00000563092	MKL1	Q969V6	931 aa		10	□□□□□ -0.81
CKLF-208	ENST00000563092	C11orf16	Q9NQ32	467 aa		10	□□□□□ -0.81
CKLF-208	ENST00000563092	FBXO40	Q9UH90	709 aa		10	□□□□□ -0.81
CKLF-208	ENST00000563092	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	9.99	□□□□□ -0.81
CKLF-208	ENST00000563092	B4GALT4	O60513	344 aa		9.99	□□□□□ -0.81
CKLF-208	ENST00000563092	CHGB	P05060	677 aa		9.99	□□□□□ -0.81
CKLF-208	ENST00000563092	MYOG	P15173	224 aa		9.99	□□□□□ -0.81
CKLF-208	ENST00000563092	BEX3	Q00994	111 aa		9.99	□□□□□ -0.81
CKLF-208	ENST00000563092	ITGA7	Q13683	1181 aa		9.99	□□□□□ -0.81
CKLF-208	ENST00000563092	SBK1	Q52WX2	424 aa		9.99	□□□□□ -0.81
CKLF-208	ENST00000563092	HSP90AB4P	Q58FF6	505 aa		9.99	□□□□□ -0.81
CKLF-208	ENST00000563092	VARS2	Q5ST30	1063 aa	Known RBP	9.99	□□□□□ -0.81
CKLF-208	ENST00000563092	PPP2R2D	Q66LE6	453 aa		9.99	□□□□□ -0.81
CKLF-208	ENST00000563092	IL27	Q8NEV9	243 aa		9.99	□□□□□ -0.81
CKLF-208	ENST00000563092	EPHX3	Q9H6B9	360 aa		9.99	□□□□□ -0.81
CKLF-208	ENST00000563092	ZSWIM6	Q9HCJ5	1215 aa		9.99	□□□□□ -0.81
CKLF-208	ENST00000563092	IL1RAPL2	Q9NP60	686 aa		9.99	□□□□□ -0.81
CKLF-208	ENST00000563092	PAG1	Q9NWQ8	432 aa		9.99	□□□□□ -0.81
CKLF-208	ENST00000563092	COG5	Q9UP83	839 aa		9.99	□□□□□ -0.81
CKLF-208	ENST00000563092		Q9Y3F1	56 aa		9.99	□□□□□ -0.81
CKLF-208	ENST00000563092	SLC4A7	Q9Y6M7	1214 aa		9.99	□□□□□ -0.81
CKLF-208	ENST00000563092	BAZ2A	Q9UIF9	1905 aa	Known RBP	9.99	□□□□□ -0.81
CKLF-208	ENST00000563092	LRRC37A2	A6NM11	1700 aa		9.99	□□□□□ -0.81
CKLF-208	ENST00000563092	SOWAHB	A6NEL2	793 aa		9.98	□□□□□ -0.81
CKLF-208	ENST00000563092	EPOP	A6NHQ4	379 aa		9.98	□□□□□ -0.81
CKLF-208	ENST00000563092	GPR37L1	O60883	481 aa		9.98	□□□□□ -0.81
CKLF-208	ENST00000563092	ZBED4	O75132	1171 aa		9.98	□□□□□ -0.81
CKLF-208	ENST00000563092	PFKM	P08237	780 aa		9.98	□□□□□ -0.81
CKLF-208	ENST00000563092	ATP2A2	P16615	1042 aa	Known RBP	9.98	□□□□□ -0.81
CKLF-208	ENST00000563092	ATP5J	P18859	108 aa		9.98	□□□□□ -0.81
CKLF-208	ENST00000563092	CNTN2	Q02246	1040 aa		9.98	□□□□□ -0.81
CKLF-208	ENST00000563092	TNFAIP2	Q03169	654 aa		9.98	□□□□□ -0.81
CKLF-208	ENST00000563092	FSCN1	Q16658	493 aa	Known RBP	9.98	□□□□□ -0.81
CKLF-208	ENST00000563092	TAPT1	Q6NXT6	567 aa		9.98	□□□□□ -0.81
CKLF-208	ENST00000563092	RPUSD2	Q8IZ73	545 aa	Known RBP	9.98	□□□□□ -0.81
CKLF-208	ENST00000563092	ANKRD35	Q8N283	1001 aa		9.98	□□□□□ -0.81
CKLF-208	ENST00000563092	MORC4	Q8TE76	937 aa		9.98	□□□□□ -0.81
CKLF-208	ENST00000563092	VTI1A	Q96AJ9	217 aa		9.98	□□□□□ -0.81
CKLF-208	ENST00000563092	DNAJC2	Q99543	621 aa	Known RBP	9.98	□□□□□ -0.81
CKLF-208	ENST00000563092	HAUS7	Q99871	368 aa		9.98	□□□□□ -0.81
CKLF-208	ENST00000563092	TRPV6	Q9H1D0	765 aa		9.98	□□□□□ -0.81
CKLF-208	ENST00000563092	RAVER2	Q9HCJ3	691 aa	Known RBP	9.98	□□□□□ -0.81
CKLF-208	ENST00000563092	ARPP21	Q9UBL0	812 aa	Predicted RBP	9.98	□□□□□ -0.81
CKLF-208	ENST00000563092	APBB1	O00213	710 aa		9.97	□□□□□ -0.81
CKLF-208	ENST00000563092	FDX1	P10109	184 aa		9.97	□□□□□ -0.81
CKLF-208	ENST00000563092	SMPD1	P17405	629 aa		9.97	□□□□□ -0.81
CKLF-208	ENST00000563092	CCL23	P55773	120 aa		9.97	□□□□□ -0.81
CKLF-208	ENST00000563092	TTLL4	Q14679	1199 aa		9.97	□□□□□ -0.81
CKLF-208	ENST00000563092	GIMAP6	Q6P9H5	292 aa		9.97	□□□□□ -0.81
CKLF-208	ENST00000563092	TLK2	Q86UE8	772 aa		9.97	□□□□□ -0.81
CKLF-208	ENST00000563092	ITPRIP	Q8IWB1	547 aa		9.97	□□□□□ -0.81
CKLF-208	ENST00000563092	RPAP2	Q8IXW5	612 aa	Predicted RBP	9.97	□□□□□ -0.81
CKLF-208	ENST00000563092	AMOTL1	Q8IY63	956 aa		9.97	□□□□□ -0.81
CKLF-208	ENST00000563092	CPXCR1	Q8N123	301 aa		9.97	□□□□□ -0.81
CKLF-208	ENST00000563092	CLASRP	Q8N2M8	674 aa	Known RBP	9.97	□□□□□ -0.81
CKLF-208	ENST00000563092	GMCL1P1	Q8NEA9	526 aa		9.97	□□□□□ -0.81
CKLF-208	ENST00000563092	KHSRP	Q92945	711 aa	Known RBP eCLIP	9.97	□□□□□ -0.81
CKLF-208	ENST00000563092	KIF1BP	Q96EK5	621 aa		9.97	□□□□□ -0.81
CKLF-208	ENST00000563092	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	9.97	□□□□□ -0.81
CKLF-208	ENST00000563092	PUS7L	Q9H0K6	701 aa	Known RBP	9.97	□□□□□ -0.81
CKLF-208	ENST00000563092	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	9.97	□□□□□ -0.81
CKLF-208	ENST00000563092	A1CF	Q9NQ94	594 aa	Known RBP	9.97	□□□□□ -0.81
CKLF-208	ENST00000563092	FEM1B	Q9UK73	627 aa		9.97	□□□□□ -0.81
CKLF-208	ENST00000563092	HCN4	Q9Y3Q4	1203 aa		9.97	□□□□□ -0.81
CKLF-208	ENST00000563092	SLC4A4	Q9Y6R1	1079 aa		9.97	□□□□□ -0.81
CKLF-208	ENST00000563092	ZNF536	O15090	1300 aa		9.97	□□□□□ -0.81
CKLF-208	ENST00000563092	MYO9B	Q13459	2157 aa		9.97	□□□□□ -0.81
CKLF-208	ENST00000563092	MCM3AP	O60318	1980 aa		9.96	□□□□□ -0.81
CKLF-208	ENST00000563092	ASB14	A6NK59	587 aa		9.96	□□□□□ -0.82

Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms