RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 WDR7Q9Y4E6 1490 aa7.17□□□□□ -1.26
SMG1-206ENST00000562668 MAP3K4Q9Y6R4 1608 aa7.17□□□□□ -1.26
SMG1-206ENST00000562668 GSNP06396 782 aa7.17□□□□□ -1.26
SMG1-206ENST00000562668 ERVFRD-1P60508 538 aa7.17□□□□□ -1.26
SMG1-206ENST00000562668 TDRD10Q5VZ19 366 aaKnown RBP7.17□□□□□ -1.26
SMG1-206ENST00000562668 PPFIBP1Q86W92 1011 aa7.17□□□□□ -1.26
SMG1-206ENST00000562668 MBD1Q9UIS9 605 aaPredicted RBP7.17□□□□□ -1.26
SMG1-206ENST00000562668 CNOT6Q9ULM6 557 aaKnown RBP7.17□□□□□ -1.26
SMG1-206ENST00000562668 VPS8Q8N3P4 1428 aa7.17□□□□□ -1.26
SMG1-206ENST00000562668 WTIPA6NIX2 430 aaPredicted RBP7.16□□□□□ -1.26
SMG1-206ENST00000562668 RFXAPO00287 272 aa7.16□□□□□ -1.26
SMG1-206ENST00000562668 VAV1P15498 845 aa7.16□□□□□ -1.26
SMG1-206ENST00000562668 CEBPAP49715 358 aaPredicted RBP7.16□□□□□ -1.26
SMG1-206ENST00000562668 MFAP1P55081 439 aaKnown RBP7.16□□□□□ -1.26
SMG1-206ENST00000562668 SRSF3P84103 164 aaKnown RBP7.16□□□□□ -1.26
SMG1-206ENST00000562668 OLFML2BQ68BL8 750 aa7.16□□□□□ -1.26
SMG1-206ENST00000562668 TTLL10Q6ZVT0 673 aa7.16□□□□□ -1.26
SMG1-206ENST00000562668 RNF34Q969K3 372 aa7.16□□□□□ -1.26
SMG1-206ENST00000562668 AP5S1Q9NUS5 200 aa7.16□□□□□ -1.26
SMG1-206ENST00000562668 RAPGEFL1Q9UHV5 662 aa7.16□□□□□ -1.26
SMG1-206ENST00000562668 ABCA9Q8IUA7 1624 aa7.16□□□□□ -1.26
SMG1-206ENST00000562668 CFAP43Q8NDM7 1665 aa7.16□□□□□ -1.26
SMG1-206ENST00000562668 RECKO95980 971 aa7.15□□□□□ -1.26
SMG1-206ENST00000562668 SDHBP21912 280 aa7.15□□□□□ -1.26
SMG1-206ENST00000562668 VIPR1P32241 457 aa7.15□□□□□ -1.26
SMG1-206ENST00000562668 ARL4AP40617 200 aa7.15□□□□□ -1.26
SMG1-206ENST00000562668 YBX1P67809 324 aaKnown RBP7.15□□□□□ -1.26
SMG1-206ENST00000562668 RTP2Q5QGT7 225 aa7.15□□□□□ -1.26
SMG1-206ENST00000562668 RBBP8NLQ8NC74 664 aaPredicted RBP7.15□□□□□ -1.26
SMG1-206ENST00000562668 DDX41Q9UJV9 622 aaKnown RBP7.15□□□□□ -1.26
SMG1-206ENST00000562668 PPT2Q9UMR5 302 aa7.15□□□□□ -1.26
SMG1-206ENST00000562668 KCTD3Q9Y597 815 aa7.15□□□□□ -1.26
SMG1-206ENST00000562668 CCDC18Q5T9S5 1454 aa7.15□□□□□ -1.27
SMG1-206ENST00000562668 A0A1W2PQ45 241 aaPredicted RBP7.14□□□□□ -1.27
SMG1-206ENST00000562668 A0A1W2PQY0 241 aa7.14□□□□□ -1.27
SMG1-206ENST00000562668 KRTAP9-7A8MTY7 169 aa7.14□□□□□ -1.27
SMG1-206ENST00000562668 ABLIM1O14639 778 aa7.14□□□□□ -1.27
SMG1-206ENST00000562668 INHBBP09529 407 aa7.14□□□□□ -1.27
SMG1-206ENST00000562668 GUCY2CP25092 1073 aa7.14□□□□□ -1.27
SMG1-206ENST00000562668 LAPTM5Q13571 262 aa7.14□□□□□ -1.27
SMG1-206ENST00000562668 SSPNQ14714 243 aa7.14□□□□□ -1.27
SMG1-206ENST00000562668 KIR3DS1Q14943 382 aa7.14□□□□□ -1.27
SMG1-206ENST00000562668 KIF14Q15058 1648 aa7.14□□□□□ -1.27
SMG1-206ENST00000562668 ZNF385BQ569K4 471 aa7.14□□□□□ -1.27
SMG1-206ENST00000562668 FBXW10Q5XX13 1052 aa7.14□□□□□ -1.27
SMG1-206ENST00000562668 DCAF15Q66K64 600 aa7.14□□□□□ -1.27
SMG1-206ENST00000562668 CWF19L1Q69YN2 538 aaKnown RBP7.14□□□□□ -1.27
SMG1-206ENST00000562668 LSRQ86X29 649 aaPredicted RBP7.14□□□□□ -1.27
SMG1-206ENST00000562668 KRTAP4-9Q9BYQ8 210 aa7.14□□□□□ -1.27
SMG1-206ENST00000562668 SIRT5Q9NXA8 310 aa7.14□□□□□ -1.27
SMG1-206ENST00000562668 TIAM1Q13009 1591 aa7.13□□□□□ -1.27
SMG1-206ENST00000562668 TTC37Q6PGP7 1564 aa7.13□□□□□ -1.27
SMG1-206ENST00000562668 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.13□□□□□ -1.27
SMG1-206ENST00000562668 H0Y8X5 98 aa7.13□□□□□ -1.27
SMG1-206ENST00000562668 PRKCAP17252 672 aa7.13□□□□□ -1.27
SMG1-206ENST00000562668 EPHB3P54753 998 aa7.13□□□□□ -1.27
SMG1-206ENST00000562668 RACK1P63244 317 aaKnown RBP7.13□□□□□ -1.27
SMG1-206ENST00000562668 ZYXQ15942 572 aaKnown RBP7.13□□□□□ -1.27
SMG1-206ENST00000562668 AXDND1Q5T1B0 1012 aaPredicted RBP7.13□□□□□ -1.27
SMG1-206ENST00000562668 NAT16Q8N8M0 369 aa7.13□□□□□ -1.27
SMG1-206ENST00000562668 NUP43Q8NFH3 380 aa7.13□□□□□ -1.27
SMG1-206ENST00000562668 SIGLEC10Q96LC7 697 aa7.13□□□□□ -1.27
SMG1-206ENST00000562668 SLC12A9Q9BXP2 914 aa7.13□□□□□ -1.27
SMG1-206ENST00000562668 GP6Q9HCN6 339 aa7.13□□□□□ -1.27
SMG1-206ENST00000562668 TNFRSF12AQ9NP84 129 aa7.13□□□□□ -1.27
SMG1-206ENST00000562668 IMPACTQ9P2X3 320 aa7.13□□□□□ -1.27
SMG1-206ENST00000562668 ACSL6Q9UKU0 697 aa7.13□□□□□ -1.27
SMG1-206ENST00000562668 MAP3K1Q13233 1512 aa7.12□□□□□ -1.27
SMG1-206ENST00000562668 SCAMP3O14828 347 aaKnown RBP7.12□□□□□ -1.27
SMG1-206ENST00000562668 MPOP05164 745 aa7.12□□□□□ -1.27
SMG1-206ENST00000562668 PI3P19957 117 aa7.12□□□□□ -1.27
SMG1-206ENST00000562668 VAMP1P23763 118 aa7.12□□□□□ -1.27
SMG1-206ENST00000562668 TMEM62Q0P6H9 643 aa7.12□□□□□ -1.27
SMG1-206ENST00000562668 COL9A2Q14055 689 aaPredicted RBP7.12□□□□□ -1.27
SMG1-206ENST00000562668 ANKRD39Q53RE8 183 aa7.12□□□□□ -1.27
SMG1-206ENST00000562668 LILRA6Q6PI73 481 aa7.12□□□□□ -1.27
SMG1-206ENST00000562668 UNC5AQ6ZN44 842 aa7.12□□□□□ -1.27
SMG1-206ENST00000562668 RUFY4Q6ZNE9 571 aa7.12□□□□□ -1.27
SMG1-206ENST00000562668 JMJD8Q96S16 334 aa7.12□□□□□ -1.27
SMG1-206ENST00000562668 SRRTQ9BXP5 876 aaKnown RBP7.12□□□□□ -1.27
SMG1-206ENST00000562668 CNTD2Q9H8S5 307 aa7.12□□□□□ -1.27
SMG1-206ENST00000562668 FHOD1Q9Y613 1164 aa7.12□□□□□ -1.27
SMG1-206ENST00000562668 IRAK3Q9Y616 596 aa7.12□□□□□ -1.27
SMG1-206ENST00000562668 TROQ12816 1431 aaPredicted RBP7.11□□□□□ -1.27
SMG1-206ENST00000562668 N4BP3O15049 544 aa7.11□□□□□ -1.27
SMG1-206ENST00000562668 GSTM1P09488 218 aa7.11□□□□□ -1.27
SMG1-206ENST00000562668 ZNF445P59923 1031 aa7.11□□□□□ -1.27
SMG1-206ENST00000562668 CYP4F8P98187 520 aa7.11□□□□□ -1.27
SMG1-206ENST00000562668 NOL9Q5SY16 702 aaKnown RBP7.11□□□□□ -1.27
SMG1-206ENST00000562668 TCERG1LQ5VWI1 586 aa7.11□□□□□ -1.27
SMG1-206ENST00000562668 CYP2R1Q6VVX0 501 aa7.11□□□□□ -1.27
SMG1-206ENST00000562668 TMEM151BQ8IW70 566 aa7.11□□□□□ -1.27
SMG1-206ENST00000562668 TMEM52Q8NDY8 209 aa7.11□□□□□ -1.27
SMG1-206ENST00000562668 FAM86C1Q9NVL1 165 aa7.11□□□□□ -1.27
SMG1-206ENST00000562668 KLHL14Q9P2G3 628 aa7.11□□□□□ -1.27
SMG1-206ENST00000562668 ZNF214Q9UL59 606 aaPredicted RBP7.11□□□□□ -1.27
SMG1-206ENST00000562668 TSPOAP1O95153 1857 aa7.11□□□□□ -1.27
SMG1-206ENST00000562668 IRS4O14654 1257 aaPredicted RBP7.1□□□□□ -1.27
SMG1-206ENST00000562668 TP53P04637 393 aaPredicted RBP7.1□□□□□ -1.27
SMG1-206ENST00000562668 ITGA4P13612 1032 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms