RNA–Protein interactions for RNA: ENST00000562578.5

DEF8-208, Transcript of differentially expressed in FDCP 8 homolog, humanhuman

TSL 4

Gene DEF8, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEF8-208ENST00000562578 NDUFB10O96000 172 aa18.09■□□□□ 0.49
DEF8-208ENST00000562578 RFC2P35250 354 aa18.09■□□□□ 0.49
DEF8-208ENST00000562578 NOL8Q76FK4 1167 aaKnown RBP18.09■□□□□ 0.49
DEF8-208ENST00000562578 ARNTL2Q8WYA1 636 aa18.09■□□□□ 0.49
DEF8-208ENST00000562578 C1orf115Q9H7X2 142 aa18.09■□□□□ 0.49
DEF8-208ENST00000562578 RAVER2Q9HCJ3 691 aaKnown RBP18.09■□□□□ 0.49
DEF8-208ENST00000562578 LMCD1Q9NZU5 365 aa18.09■□□□□ 0.49
DEF8-208ENST00000562578 SIP14410 1827 aa18.09■□□□□ 0.49
DEF8-208ENST00000562578 LPXNO60711 386 aa18.08■□□□□ 0.48
DEF8-208ENST00000562578 FDX1P10109 184 aa18.08■□□□□ 0.48
DEF8-208ENST00000562578 ADD2P35612 726 aa18.08■□□□□ 0.48
DEF8-208ENST00000562578 SLC4A3P48751 1232 aa18.08■□□□□ 0.48
DEF8-208ENST00000562578 CNTN2Q02246 1040 aa18.08■□□□□ 0.48
DEF8-208ENST00000562578 GRB10Q13322 594 aa18.08■□□□□ 0.48
DEF8-208ENST00000562578 CD320Q9NPF0 282 aa18.08■□□□□ 0.48
DEF8-208ENST00000562578 FEM1BQ9UK73 627 aa18.08■□□□□ 0.48
DEF8-208ENST00000562578 SYNPO2Q9UMS6 1093 aa18.08■□□□□ 0.48
DEF8-208ENST00000562578 KIF28PB7ZC32 967 aa18.07■□□□□ 0.48
DEF8-208ENST00000562578 SMPD1P17405 629 aa18.07■□□□□ 0.48
DEF8-208ENST00000562578 PSMC6P62333 389 aa18.07■□□□□ 0.48
DEF8-208ENST00000562578 ZKSCAN2Q63HK3 967 aa18.07■□□□□ 0.48
DEF8-208ENST00000562578 IQSEC1Q6DN90 963 aa18.07■□□□□ 0.48
DEF8-208ENST00000562578 CTR9Q6PD62 1173 aa18.07■□□□□ 0.48
DEF8-208ENST00000562578 HERC6Q8IVU3 1022 aa18.07■□□□□ 0.48
DEF8-208ENST00000562578 MIER1Q8N108 512 aa18.07■□□□□ 0.48
DEF8-208ENST00000562578 KIFC2Q96AC6 838 aa18.07■□□□□ 0.48
DEF8-208ENST00000562578 ACAD9Q9H845 621 aa18.07■□□□□ 0.48
DEF8-208ENST00000562578 ARPP21Q9UBL0 812 aaPredicted RBP18.07■□□□□ 0.48
DEF8-208ENST00000562578 TRIP12Q14669 1992 aaPredicted RBP18.07■□□□□ 0.48
DEF8-208ENST00000562578 TNKSO95271 1327 aa18.06■□□□□ 0.48
DEF8-208ENST00000562578 PITPNM1O00562 1244 aa18.06■□□□□ 0.48
DEF8-208ENST00000562578 DYNC1LI2O43237 492 aaPredicted RBP18.06■□□□□ 0.48
DEF8-208ENST00000562578 MRE11P49959 708 aa18.06■□□□□ 0.48
DEF8-208ENST00000562578 DEFB128Q7Z7B8 93 aa18.06■□□□□ 0.48
DEF8-208ENST00000562578 DNAJC2Q99543 621 aaKnown RBP18.06■□□□□ 0.48
DEF8-208ENST00000562578 KCNH6Q9H252 994 aa18.06■□□□□ 0.48
DEF8-208ENST00000562578 EXOC6BQ9Y2D4 811 aa18.06■□□□□ 0.48
DEF8-208ENST00000562578 SOWAHBA6NEL2 793 aa18.05■□□□□ 0.48
DEF8-208ENST00000562578 BAIAP3O94812 1187 aa18.05■□□□□ 0.48
DEF8-208ENST00000562578 ARHGEF15O94989 841 aa18.05■□□□□ 0.48
DEF8-208ENST00000562578 HSP90AB4PQ58FF6 505 aa18.05■□□□□ 0.48
DEF8-208ENST00000562578 TAPT1Q6NXT6 567 aa18.05■□□□□ 0.48
DEF8-208ENST00000562578 RPAP2Q8IXW5 612 aaPredicted RBP18.05■□□□□ 0.48
DEF8-208ENST00000562578 MKL1Q969V6 931 aa18.05■□□□□ 0.48
DEF8-208ENST00000562578 SNX27Q96L92 541 aa18.05■□□□□ 0.48
DEF8-208ENST00000562578 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.05■□□□□ 0.485e-7■□□□□ 10.5
DEF8-208ENST00000562578 A1CFQ9NQ94 594 aaKnown RBP18.05■□□□□ 0.48
DEF8-208ENST00000562578 TRMT13Q9NUP7 481 aaKnown RBP18.05■□□□□ 0.48
DEF8-208ENST00000562578 ZNF318Q5VUA4 2279 aa18.05■□□□□ 0.48
DEF8-208ENST00000562578 CYP2C9P11712 490 aa18.04■□□□□ 0.48
DEF8-208ENST00000562578 ALADP13716 330 aa18.04■□□□□ 0.48
DEF8-208ENST00000562578 RASA1P20936 1047 aa18.04■□□□□ 0.48
DEF8-208ENST00000562578 UBE3CQ15386 1083 aa18.04■□□□□ 0.48
DEF8-208ENST00000562578 CEP85Q6P2H3 762 aa18.04■□□□□ 0.48
DEF8-208ENST00000562578 FAM178BQ8IXR5 827 aa18.04■□□□□ 0.48
DEF8-208ENST00000562578 RHPN1Q8TCX5 695 aa18.04■□□□□ 0.48
DEF8-208ENST00000562578 HOMER2Q9NSB8 354 aa18.04■□□□□ 0.48
DEF8-208ENST00000562578 POLR3EQ9NVU0 708 aa18.04■□□□□ 0.48
DEF8-208ENST00000562578 PAG1Q9NWQ8 432 aa18.04■□□□□ 0.48
DEF8-208ENST00000562578 COG6Q9Y2V7 657 aa18.04■□□□□ 0.48
DEF8-208ENST00000562578 SLC4A4Q9Y6R1 1079 aa18.04■□□□□ 0.48
DEF8-208ENST00000562578 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.03■□□□□ 0.48
DEF8-208ENST00000562578 IGKV6D-41A0A0C4DH26 115 aa18.03■□□□□ 0.48
DEF8-208ENST00000562578 TKFCQ3LXA3 575 aa18.03■□□□□ 0.48
DEF8-208ENST00000562578 SBK1Q52WX2 424 aa18.03■□□□□ 0.48
DEF8-208ENST00000562578 GJD3Q8N144 294 aa18.03■□□□□ 0.48
DEF8-208ENST00000562578 CLASRPQ8N2M8 674 aaKnown RBP18.03■□□□□ 0.48
DEF8-208ENST00000562578 GMCL1P1Q8NEA9 526 aa18.03■□□□□ 0.48
DEF8-208ENST00000562578 IL1RAPL2Q9NP60 686 aa18.03■□□□□ 0.48
DEF8-208ENST00000562578 VTA1Q9NP79 307 aa18.03■□□□□ 0.48
DEF8-208ENST00000562578 TRIOO75962 3097 aa18.02■□□□□ 0.48
DEF8-208ENST00000562578 IQCF3P0C7M6 154 aa18.02■□□□□ 0.48
DEF8-208ENST00000562578 PTGS1P23219 599 aa18.02■□□□□ 0.48
DEF8-208ENST00000562578 PURAQ00577 322 aaKnown RBP18.02■□□□□ 0.48
DEF8-208ENST00000562578 LEXMQ3ZCV2 418 aa18.02■□□□□ 0.48
DEF8-208ENST00000562578 SLFNL1Q499Z3 407 aa18.02■□□□□ 0.48
DEF8-208ENST00000562578 DUSP28Q4G0W2 176 aa18.02■□□□□ 0.48
DEF8-208ENST00000562578 MORC4Q8TE76 937 aa18.02■□□□□ 0.48
DEF8-208ENST00000562578 UBE2ZQ9H832 354 aaPredicted RBP18.02■□□□□ 0.48
DEF8-208ENST00000562578 PDGFCQ9NRA1 345 aa18.02■□□□□ 0.48
DEF8-208ENST00000562578 RNF146Q9NTX7 359 aa18.02■□□□□ 0.48
DEF8-208ENST00000562578 CLIP2Q9UDT6 1046 aa18.02■□□□□ 0.48
DEF8-208ENST00000562578 NHLH1Q02575 133 aa18.01■□□□□ 0.47
DEF8-208ENST00000562578 FBXO16Q8IX29 292 aaPredicted RBP18.01■□□□□ 0.47
DEF8-208ENST00000562578 MKNK2Q9HBH9 465 aa18.01■□□□□ 0.47
DEF8-208ENST00000562578 ZNF536O15090 1300 aa18■□□□□ 0.47
DEF8-208ENST00000562578 IFIT2P09913 472 aaKnown RBP18■□□□□ 0.47
DEF8-208ENST00000562578 BMP3P12645 472 aa18■□□□□ 0.47
DEF8-208ENST00000562578 CPT1AP50416 773 aa18■□□□□ 0.47
DEF8-208ENST00000562578 STAT2P52630 851 aa18■□□□□ 0.47
DEF8-208ENST00000562578 LRRFIP1Q32MZ4 808 aaKnown RBP18■□□□□ 0.47
DEF8-208ENST00000562578 NFRKBQ6P4R8 1299 aa18■□□□□ 0.47
DEF8-208ENST00000562578 GIMAP6Q6P9H5 292 aa18■□□□□ 0.47
DEF8-208ENST00000562578 RETREG2Q8NC44 543 aa18■□□□□ 0.47
DEF8-208ENST00000562578 MTMR4Q9NYA4 1195 aa18■□□□□ 0.47
DEF8-208ENST00000562578 USP34Q70CQ2 3546 aa17.99■□□□□ 0.47
DEF8-208ENST00000562578 LOC102724159A0A0B4J2E5 919 aa17.99■□□□□ 0.47
DEF8-208ENST00000562578 TTLL1O95922 423 aa17.99■□□□□ 0.47
DEF8-208ENST00000562578 KCNJ6P48051 423 aa17.99■□□□□ 0.47
DEF8-208ENST00000562578 PTPN11Q06124 597 aaPredicted RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms