RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 TIMP1P01033 207 aa19.75■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 PTGS1P23219 599 aa19.75■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 BEX3Q00994 111 aa19.75■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 HDAC1Q13547 482 aaPredicted RBP19.75■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 CYP39A1Q9NYL5 469 aa19.75■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 GNEQ9Y223 722 aaKnown RBP19.75■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 A0A0U1RQG5 324 aaPredicted RBP19.74■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 ASB14A6NK59 587 aa19.74■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 ARVCFO00192 962 aa19.74■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 FGAP02671 866 aa19.74■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 TNFAIP2Q03169 654 aa19.74■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.74■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 FAM126BQ8IXS8 530 aa19.74■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 VTI1AQ96AJ9 217 aa19.74■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 PURBQ96QR8 312 aaKnown RBP19.74■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 SLC16A2P36021 539 aa19.73■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 CCDC96Q2M329 555 aa19.73■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 MCMDC2Q4G0Z9 681 aa19.73■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 TTBK2Q6IQ55 1244 aa19.73■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 MFSD5Q6N075 450 aa19.73■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 TLK2Q86UE8 772 aa19.73■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 ZNF589Q86UQ0 364 aaPredicted RBP19.73■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 DCAF4Q8WV16 495 aa19.73■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 MYLIPQ8WY64 445 aa19.73■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.73■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 RANBP17Q9H2T7 1088 aaKnown RBP19.73■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 PDGFCQ9NRA1 345 aa19.73■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 CCPG1Q9ULG6 757 aa19.73■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 ICAM1P05362 532 aa19.72■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 HSPD1P10809 573 aaKnown RBP19.72■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 SMPD1P17405 629 aa19.72■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 RRP12Q5JTH9 1297 aaKnown RBP19.72■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 TMEM63BQ5T3F8 832 aa19.72■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 TAPT1Q6NXT6 567 aa19.72■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 BTNL9Q6UXG8 535 aa19.72■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 NSMFQ6X4W1 530 aa19.72■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 C16orf59Q7L2K0 433 aa19.72■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 FBXO16Q8IX29 292 aaPredicted RBP19.72■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 TMEM47Q9BQJ4 181 aa19.72■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 TOMM22Q9NS69 142 aa19.72■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 ZMYM6O95789 1325 aa19.72■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 CD4P01730 458 aa19.71■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 NMIQ13287 307 aaPredicted RBP19.71■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 CXCL17Q6UXB2 119 aa19.71■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 NOL8Q76FK4 1167 aaKnown RBP19.71■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 EEPD1Q7L9B9 569 aa19.71■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 TCP11L1Q9NUJ3 509 aa19.71■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 FRMPD2Q68DX3 1309 aaPredicted RBP19.71■□□□□ 0.75
VPS9D1-AS1-201ENST00000562298 TMEM265A0A087WTH1 108 aa19.7■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 TOP1P11387 765 aaKnown RBP19.7■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 CSF2RAP15509 400 aa19.7■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 HAND2P61296 217 aa19.7■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 FSCN1Q16658 493 aaKnown RBP19.7■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 SYDE2Q5VT97 1194 aa19.7■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 SLC43A3Q8NBI5 491 aa19.7■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 MAFAQ8NHW3 353 aaPredicted RBP19.7■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 MORC4Q8TE76 937 aa19.7■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 COL25A1Q9BXS0 654 aaPredicted RBP19.7■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 PPP1R12CQ9BZL4 782 aa19.7■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 LNPKQ9C0E8 428 aa19.7■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 GRIN2DO15399 1336 aa19.7■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.69■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.69■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 NFIBO00712 420 aa19.69■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 DYNC1LI2O43237 492 aaPredicted RBP19.69■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 DNAJB2P25686 324 aa19.69■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 PPIGQ13427 754 aaKnown RBP eCLIP19.69■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 TICAM2Q86XR7 235 aa19.69■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 GPCPD1Q9NPB8 672 aa19.69■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 CCDC171Q6TFL3 1326 aa19.69■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 CHD7Q9P2D1 2997 aa19.68■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 TRIM6-TRIM34B2RNG4 842 aa19.68■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 TLR3O15455 904 aaKnown RBP19.68■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 PDHBP11177 359 aa19.68■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 BAATQ14032 418 aaPredicted RBP19.68■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 TMEM240Q5SV17 173 aa19.68■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 RASIP1Q5U651 963 aa19.68■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 IQSEC1Q6DN90 963 aa19.68■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 TBC1D10CQ8IV04 446 aa19.68■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 AP5M1Q9H0R1 490 aa19.68■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 VTA1Q9NP79 307 aa19.68■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 CABYRO75952 493 aa19.67■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 ACRP10323 421 aa19.67■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 FOSL2P15408 326 aa19.67■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 CYP2C18P33260 490 aa19.67■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 ALDH5A1P51649 535 aaPredicted RBP19.67■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 ITGA7Q13683 1181 aa19.67■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 GRIN2CQ14957 1233 aa19.67■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 TMEM199Q8N511 208 aa19.67■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 CLEC4DQ8WXI8 215 aa19.67■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 Q9Y3F1 56 aa19.67■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 CUL9Q8IWT3 2517 aa19.67■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 PSMC6P62333 389 aa19.66■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 AKNAD1Q5T1N1 836 aa19.66■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 SLC30A10Q6XR72 485 aa19.66■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 KIAA1211Q6ZU35 1233 aa19.66■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 SMC5Q8IY18 1101 aa19.66■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 RILPL2Q969X0 211 aa19.66■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 UMODL1Q5DID0 1318 aa19.66■□□□□ 0.74
VPS9D1-AS1-201ENST00000562298 REV3LO60673 3130 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms