RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 HALP42357 657 aa6.28□□□□□ -1.4
CAPN3-211ENST00000562199 ATP1A2P50993 1020 aa6.28□□□□□ -1.4
CAPN3-211ENST00000562199 PAPOLAP51003 745 aaKnown RBP6.28□□□□□ -1.4
CAPN3-211ENST00000562199 NLRP12P59046 1061 aa6.28□□□□□ -1.4
CAPN3-211ENST00000562199 MRPL28Q13084 256 aaKnown RBP6.28□□□□□ -1.4
CAPN3-211ENST00000562199 LAMC2Q13753 1193 aa6.28□□□□□ -1.4
CAPN3-211ENST00000562199 DOC2BQ14184 412 aa6.28□□□□□ -1.4
CAPN3-211ENST00000562199 ELOA3BQ3SY89 546 aa6.28□□□□□ -1.4
CAPN3-211ENST00000562199 CFAP58Q5T655 872 aa6.28□□□□□ -1.4
CAPN3-211ENST00000562199 C20orf194Q5TEA3 1177 aa6.28□□□□□ -1.4
CAPN3-211ENST00000562199 SLC4A10Q6U841 1118 aa6.28□□□□□ -1.4
CAPN3-211ENST00000562199 RTL10Q7L3V2 364 aa6.28□□□□□ -1.4
CAPN3-211ENST00000562199 CATSPER4Q7RTX7 472 aa6.28□□□□□ -1.4
CAPN3-211ENST00000562199 NCAPG2Q86XI2 1143 aa6.28□□□□□ -1.4
CAPN3-211ENST00000562199 JAMLQ86YT9 394 aa6.28□□□□□ -1.4
CAPN3-211ENST00000562199 RBM12BQ8IXT5 1001 aaKnown RBP6.28□□□□□ -1.4
CAPN3-211ENST00000562199 ELOA3Q8NG57 546 aa6.28□□□□□ -1.4
CAPN3-211ENST00000562199 TTC8Q8TAM2 541 aa6.28□□□□□ -1.4
CAPN3-211ENST00000562199 HDAC7Q8WUI4 952 aa6.28□□□□□ -1.4
CAPN3-211ENST00000562199 ANKRD49Q8WVL7 239 aa6.28□□□□□ -1.4
CAPN3-211ENST00000562199 RSAD2Q8WXG1 361 aa6.28□□□□□ -1.4
CAPN3-211ENST00000562199 JPH3Q8WXH2 748 aaPredicted RBP6.28□□□□□ -1.4
CAPN3-211ENST00000562199 ZNF75CPQ92670 426 aaPredicted RBP6.28□□□□□ -1.4
CAPN3-211ENST00000562199 USP6NLQ92738 828 aa6.28□□□□□ -1.4
CAPN3-211ENST00000562199 SNX21Q969T3 373 aa6.28□□□□□ -1.4
CAPN3-211ENST00000562199 HVCN1Q96D96 273 aa6.28□□□□□ -1.4
CAPN3-211ENST00000562199 HSH2DQ96JZ2 352 aa6.28□□□□□ -1.4
CAPN3-211ENST00000562199 AP1M1Q9BXS5 423 aa6.28□□□□□ -1.4
CAPN3-211ENST00000562199 CSRNP2Q9H175 543 aa6.28□□□□□ -1.4
CAPN3-211ENST00000562199 FANCLQ9NW38 375 aa6.28□□□□□ -1.4
CAPN3-211ENST00000562199 KCTD5Q9NXV2 234 aa6.28□□□□□ -1.4
CAPN3-211ENST00000562199 CNTN3Q9P232 1028 aa6.28□□□□□ -1.4
CAPN3-211ENST00000562199 INPP5FQ9Y2H2 1132 aa6.28□□□□□ -1.4
CAPN3-211ENST00000562199 KIF3AQ9Y496 699 aa6.28□□□□□ -1.4
CAPN3-211ENST00000562199 KDM5AP29375 1690 aaKnown RBP6.28□□□□□ -1.4
CAPN3-211ENST00000562199 TRPM2O94759 1503 aa6.28□□□□□ -1.4
CAPN3-211ENST00000562199 MAPK8IP3Q9UPT6 1336 aa6.27□□□□□ -1.41
CAPN3-211ENST00000562199 LINC00854A0A1B0GVQ3 168 aa6.27□□□□□ -1.41
CAPN3-211ENST00000562199 SPTLC2O15270 562 aa6.27□□□□□ -1.41
CAPN3-211ENST00000562199 ATP9BO43861 1147 aa6.27□□□□□ -1.41
CAPN3-211ENST00000562199 PIP5K1CO60331 668 aa6.27□□□□□ -1.41
CAPN3-211ENST00000562199 CDKL5O76039 1030 aa6.27□□□□□ -1.41
CAPN3-211ENST00000562199 INMTO95050 263 aa6.27□□□□□ -1.41
CAPN3-211ENST00000562199 SLC5A1P13866 664 aa6.27□□□□□ -1.41
CAPN3-211ENST00000562199 HPDP32754 393 aaPredicted RBP6.27□□□□□ -1.41
CAPN3-211ENST00000562199 NOP2P46087 812 aaKnown RBP6.27□□□□□ -1.41
CAPN3-211ENST00000562199 IRX1P78414 480 aaPredicted RBP6.27□□□□□ -1.41
CAPN3-211ENST00000562199 PKN2Q16513 984 aaKnown RBP6.27□□□□□ -1.41
CAPN3-211ENST00000562199 KIF4BQ2VIQ3 1234 aa6.27□□□□□ -1.41
CAPN3-211ENST00000562199 RABL6Q3YEC7 729 aaPredicted RBP6.27□□□□□ -1.41
CAPN3-211ENST00000562199 TTC31Q49AM3 519 aaPredicted RBP6.27□□□□□ -1.41
CAPN3-211ENST00000562199 ARSHQ5FYA8 562 aa6.27□□□□□ -1.41
CAPN3-211ENST00000562199 HIBCHQ6NVY1 386 aaPredicted RBP6.27□□□□□ -1.41
CAPN3-211ENST00000562199 LVRNQ6Q4G3 990 aa6.27□□□□□ -1.41
CAPN3-211ENST00000562199 PACS1Q6VY07 963 aa6.27□□□□□ -1.41
CAPN3-211ENST00000562199 LRRC49Q8IUZ0 686 aa6.27□□□□□ -1.41
CAPN3-211ENST00000562199 PLEKHM2Q8IWE5 1019 aa6.27□□□□□ -1.41
CAPN3-211ENST00000562199 TRMT2AQ8IZ69 625 aaKnown RBP6.27□□□□□ -1.41
CAPN3-211ENST00000562199 TSEN2Q8NCE0 465 aaKnown RBP6.27□□□□□ -1.41
CAPN3-211ENST00000562199 TIGD1Q96MW7 591 aa6.27□□□□□ -1.41
CAPN3-211ENST00000562199 MOGAT1Q96PD6 335 aa6.27□□□□□ -1.41
CAPN3-211ENST00000562199 PHACTR1Q9C0D0 580 aa6.27□□□□□ -1.41
CAPN3-211ENST00000562199 PANK3Q9H999 370 aa6.27□□□□□ -1.41
CAPN3-211ENST00000562199 DBNDD1Q9H9R9 158 aa6.27□□□□□ -1.41
CAPN3-211ENST00000562199 ZNF304Q9HCX3 659 aa6.27□□□□□ -1.41
CAPN3-211ENST00000562199 CWC15Q9P013 229 aaKnown RBP6.27□□□□□ -1.41
CAPN3-211ENST00000562199 FBXO10Q9UK96 956 aa6.27□□□□□ -1.41
CAPN3-211ENST00000562199 PNMA8BQ9ULN7 279 aaPredicted RBP6.27□□□□□ -1.41
CAPN3-211ENST00000562199 SHROOM2Q13796 1616 aa6.27□□□□□ -1.41
CAPN3-211ENST00000562199 SCAF11Q99590 1463 aaKnown RBP6.27□□□□□ -1.41
CAPN3-211ENST00000562199 C2orf81A6NN90 581 aa6.26□□□□□ -1.41
CAPN3-211ENST00000562199 PRPF40AO75400 957 aaKnown RBP6.26□□□□□ -1.41
CAPN3-211ENST00000562199 LGR5O75473 907 aa6.26□□□□□ -1.41
CAPN3-211ENST00000562199 FRAT2O75474 233 aaPredicted RBP6.26□□□□□ -1.41
CAPN3-211ENST00000562199 SKAP2O75563 359 aaPredicted RBP6.26□□□□□ -1.41
CAPN3-211ENST00000562199 IFIT2P09913 472 aaKnown RBP6.26□□□□□ -1.41
CAPN3-211ENST00000562199 PPP2R1AP30153 589 aa6.26□□□□□ -1.41
CAPN3-211ENST00000562199 DDIT3P35638 169 aa6.26□□□□□ -1.41
CAPN3-211ENST00000562199 PSMA6P60900 246 aaKnown RBP6.26□□□□□ -1.41
CAPN3-211ENST00000562199 SLFN5Q08AF3 891 aa6.26□□□□□ -1.41
CAPN3-211ENST00000562199 WDR43Q15061 677 aaKnown RBP eCLIP6.26□□□□□ -1.41
CAPN3-211ENST00000562199 XP32Q5T750 250 aa6.26□□□□□ -1.41
CAPN3-211ENST00000562199 WWC2Q6AWC2 1192 aa6.26□□□□□ -1.41
CAPN3-211ENST00000562199 SWSAP1Q6NVH7 229 aa6.26□□□□□ -1.41
CAPN3-211ENST00000562199 MZT2AQ6P582 158 aa6.26□□□□□ -1.41
CAPN3-211ENST00000562199 C8orf86Q6ZUL3 223 aa6.26□□□□□ -1.41
CAPN3-211ENST00000562199 BEND5Q7L4P6 421 aa6.26□□□□□ -1.41
CAPN3-211ENST00000562199 MAATS1Q7Z4T9 603 aa6.26□□□□□ -1.41
CAPN3-211ENST00000562199 PNMA8AQ86V59 439 aaPredicted RBP6.26□□□□□ -1.41
CAPN3-211ENST00000562199 ZNF354CQ86Y25 554 aa6.26□□□□□ -1.41
CAPN3-211ENST00000562199 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.26□□□□□ -1.41
CAPN3-211ENST00000562199 ZNF280CQ8ND82 737 aa6.26□□□□□ -1.41
CAPN3-211ENST00000562199 BRSK1Q8TDC3 778 aa6.26□□□□□ -1.41
CAPN3-211ENST00000562199 AFAP1L1Q8TED9 768 aa6.26□□□□□ -1.41
CAPN3-211ENST00000562199 FBXO41Q8TF61 875 aa6.26□□□□□ -1.41
CAPN3-211ENST00000562199 ATXN2LQ8WWM7 1075 aaKnown RBP6.26□□□□□ -1.41
CAPN3-211ENST00000562199 RTF1Q92541 710 aaKnown RBP6.26□□□□□ -1.41
CAPN3-211ENST00000562199 TNPO1Q92973 898 aaKnown RBP6.26□□□□□ -1.41
CAPN3-211ENST00000562199 RSRC1Q96IZ7 334 aaKnown RBP6.26□□□□□ -1.41
CAPN3-211ENST00000562199 HERPUD2Q9BSE4 406 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms