RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 TBC1D2BQ9UPU7 963 aa20.68■□□□□ 0.9
RAB40C-206ENST00000561781 HPS5Q9UPZ3 1129 aa20.68■□□□□ 0.9
RAB40C-206ENST00000561781 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.68■□□□□ 0.9
RAB40C-206ENST00000561781 GOLGA8BA8MQT2 603 aa20.68■□□□□ 0.9
RAB40C-206ENST00000561781 LUC7L3O95232 432 aaKnown RBP20.68■□□□□ 0.9
RAB40C-206ENST00000561781 BLMHQ13867 455 aa20.68■□□□□ 0.9
RAB40C-206ENST00000561781 GLE1Q53GS7 698 aaKnown RBP20.68■□□□□ 0.9
RAB40C-206ENST00000561781 NT5DC1Q5TFE4 455 aa20.68■□□□□ 0.9
RAB40C-206ENST00000561781 ARMC3Q5W041 872 aa20.68■□□□□ 0.9
RAB40C-206ENST00000561781 ARMC9Q7Z3E5 817 aa20.68■□□□□ 0.9
RAB40C-206ENST00000561781 MMGT1Q8N4V1 131 aa20.68■□□□□ 0.9
RAB40C-206ENST00000561781 CTAGE1Q96RT6 745 aa20.68■□□□□ 0.9
RAB40C-206ENST00000561781 SLF1Q9BQI6 1058 aa20.68■□□□□ 0.9
RAB40C-206ENST00000561781 NOP53Q9NZM5 478 aaKnown RBP20.68■□□□□ 0.9
RAB40C-206ENST00000561781 ADD3Q9UEY8 706 aaKnown RBP20.68■□□□□ 0.9
RAB40C-206ENST00000561781 TAOK2Q9UL54 1235 aa20.68■□□□□ 0.9
RAB40C-206ENST00000561781 MYH8P13535 1937 aa20.68■□□□□ 0.9
RAB40C-206ENST00000561781 KLF18A0A0U1RQI7 1052 aa20.67■□□□□ 0.9
RAB40C-206ENST00000561781 KSR2Q6VAB6 950 aa20.67■□□□□ 0.9
RAB40C-206ENST00000561781 LRP10Q7Z4F1 713 aa20.67■□□□□ 0.9
RAB40C-206ENST00000561781 TSEN2Q8NCE0 465 aaKnown RBP20.67■□□□□ 0.9
RAB40C-206ENST00000561781 B4GALNT2Q8NHY0 566 aa20.67■□□□□ 0.9
RAB40C-206ENST00000561781 AIFM3Q96NN9 605 aa20.67■□□□□ 0.9
RAB40C-206ENST00000561781 ZIM3Q96PE6 472 aa20.67■□□□□ 0.9
RAB40C-206ENST00000561781 LMCD1Q9NZU5 365 aa20.67■□□□□ 0.9
RAB40C-206ENST00000561781 SRP68Q9UHB9 627 aaKnown RBP20.67■□□□□ 0.9
RAB40C-206ENST00000561781 ITIH6Q6UXX5 1313 aa20.67■□□□□ 0.9
RAB40C-206ENST00000561781 HSPD1P10809 573 aaKnown RBP20.67■□□□□ 0.9
RAB40C-206ENST00000561781 SARSP49591 514 aaKnown RBP20.67■□□□□ 0.9
RAB40C-206ENST00000561781 PLCD1P51178 756 aa20.67■□□□□ 0.9
RAB40C-206ENST00000561781 TTC39AQ5SRH9 613 aa20.67■□□□□ 0.9
RAB40C-206ENST00000561781 FBXL16Q8N461 479 aa20.67■□□□□ 0.9
RAB40C-206ENST00000561781 ARFGAP2Q8N6H7 521 aa20.67■□□□□ 0.9
RAB40C-206ENST00000561781 TSC22D3Q99576 134 aa20.67■□□□□ 0.9
RAB40C-206ENST00000561781 HAUS7Q99871 368 aa20.67■□□□□ 0.9
RAB40C-206ENST00000561781 KDM4CQ9H3R0 1056 aa20.67■□□□□ 0.9
RAB40C-206ENST00000561781 A6NHS1 94 aa20.66■□□□□ 0.9
RAB40C-206ENST00000561781 SLC15A2Q16348 729 aa20.66■□□□□ 0.9
RAB40C-206ENST00000561781 TNNI3KQ59H18 835 aa20.66■□□□□ 0.9
RAB40C-206ENST00000561781 GRAMD1CQ8IYS0 662 aa20.66■□□□□ 0.9
RAB40C-206ENST00000561781 ZFAND2BQ8WV99 257 aa20.66■□□□□ 0.9
RAB40C-206ENST00000561781 FPGT-TNNI3KV9GXZ4 949 aa20.66■□□□□ 0.9
RAB40C-206ENST00000561781 CNTNAP4Q9C0A0 1308 aa20.66■□□□□ 0.9
RAB40C-206ENST00000561781 SPRED3Q2MJR0 410 aa20.66■□□□□ 0.9
RAB40C-206ENST00000561781 NCAPG2Q86XI2 1143 aa20.66■□□□□ 0.9
RAB40C-206ENST00000561781 KBTBD3Q8NAB2 608 aa20.66■□□□□ 0.9
RAB40C-206ENST00000561781 HINFPQ9BQA5 517 aa20.66■□□□□ 0.9
RAB40C-206ENST00000561781 DBF4Q9UBU7 674 aaPredicted RBP20.66■□□□□ 0.9
RAB40C-206ENST00000561781 GMNCA6NCL1 334 aa20.65■□□□□ 0.9
RAB40C-206ENST00000561781 SPDYE3A6NKU9 549 aa20.65■□□□□ 0.9
RAB40C-206ENST00000561781 HMGB1P1B2RPK0 211 aaPredicted RBP20.65■□□□□ 0.9
RAB40C-206ENST00000561781 LINGO3P0C6S8 592 aa20.65■□□□□ 0.9
RAB40C-206ENST00000561781 ITIH3Q06033 890 aa20.65■□□□□ 0.9
RAB40C-206ENST00000561781 CD302Q8IX05 232 aa20.65■□□□□ 0.9
RAB40C-206ENST00000561781 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.65■□□□□ 0.9
RAB40C-206ENST00000561781 ABHD10Q9NUJ1 306 aa20.65■□□□□ 0.9
RAB40C-206ENST00000561781 UBN2Q6ZU65 1347 aa20.65■□□□□ 0.9
RAB40C-206ENST00000561781 UTYO14607 1347 aa20.65■□□□□ 0.9
RAB40C-206ENST00000561781 KRT14P02533 472 aa20.65■□□□□ 0.9
RAB40C-206ENST00000561781 ERCC5P28715 1186 aaPredicted RBP20.65■□□□□ 0.9
RAB40C-206ENST00000561781 TNFRSF8P28908 595 aa20.65■□□□□ 0.9
RAB40C-206ENST00000561781 CCDC38Q502W7 563 aa20.65■□□□□ 0.9
RAB40C-206ENST00000561781 HHATQ5VTY9 493 aa20.65■□□□□ 0.9
RAB40C-206ENST00000561781 HIBCHQ6NVY1 386 aaPredicted RBP20.65■□□□□ 0.9
RAB40C-206ENST00000561781 MTHFD1LQ6UB35 978 aa20.65■□□□□ 0.9
RAB40C-206ENST00000561781 PNPLA7Q6ZV29 1317 aa20.65■□□□□ 0.9
RAB40C-206ENST00000561781 RBM12BQ8IXT5 1001 aaKnown RBP20.65■□□□□ 0.9
RAB40C-206ENST00000561781 CACNA2D3Q8IZS8 1091 aa20.65■□□□□ 0.9
RAB40C-206ENST00000561781 TRIML1Q8N9V2 468 aa20.65■□□□□ 0.9
RAB40C-206ENST00000561781 XAGE3Q8WTP9 111 aa20.65■□□□□ 0.9
RAB40C-206ENST00000561781 ZNF570Q96NI8 536 aa20.65■□□□□ 0.9
RAB40C-206ENST00000561781 RTCBQ9Y3I0 505 aaKnown RBP20.65■□□□□ 0.9
RAB40C-206ENST00000561781 TFCP2Q12800 502 aa20.64■□□□□ 0.89
RAB40C-206ENST00000561781 CFAP58Q5T655 872 aa20.64■□□□□ 0.89
RAB40C-206ENST00000561781 APLFQ8IW19 511 aaPredicted RBP20.64■□□□□ 0.89
RAB40C-206ENST00000561781 ARHGEF1Q92888 912 aaKnown RBP20.64■□□□□ 0.89
RAB40C-206ENST00000561781 HVCN1Q96D96 273 aa20.64■□□□□ 0.89
RAB40C-206ENST00000561781 DBNDD2Q9BQY9 259 aa20.64■□□□□ 0.89
RAB40C-206ENST00000561781 ZBTB3Q9H5J0 574 aa20.64■□□□□ 0.89
RAB40C-206ENST00000561781 ANAPC4Q9UJX5 808 aa20.64■□□□□ 0.89
RAB40C-206ENST00000561781 ANO9A1A5B4 782 aa20.64■□□□□ 0.89
RAB40C-206ENST00000561781 B4DLN1 442 aa20.64■□□□□ 0.89
RAB40C-206ENST00000561781 POLR2DO15514 142 aaKnown RBP20.64■□□□□ 0.89
RAB40C-206ENST00000561781 PDE6BP35913 854 aa20.64■□□□□ 0.89
RAB40C-206ENST00000561781 C2orf54Q08AI8 447 aa20.64■□□□□ 0.89
RAB40C-206ENST00000561781 COPS6Q7L5N1 327 aa20.64■□□□□ 0.89
RAB40C-206ENST00000561781 ARHGAP22Q7Z5H3 698 aa20.64■□□□□ 0.89
RAB40C-206ENST00000561781 COL23A1Q86Y22 540 aaPredicted RBP20.64■□□□□ 0.89
RAB40C-206ENST00000561781 LINS1Q8NG48 757 aa20.64■□□□□ 0.89
RAB40C-206ENST00000561781 FAM81AQ8TBF8 368 aa20.64■□□□□ 0.89
RAB40C-206ENST00000561781 CNKSR1Q969H4 720 aa20.64■□□□□ 0.89
RAB40C-206ENST00000561781 EPAS1Q99814 870 aa20.64■□□□□ 0.89
RAB40C-206ENST00000561781 SEC31BQ9NQW1 1179 aa20.64■□□□□ 0.89
RAB40C-206ENST00000561781 HELLSQ9NRZ9 838 aa20.64■□□□□ 0.89
RAB40C-206ENST00000561781 SERTAD1Q9UHV2 236 aa20.64■□□□□ 0.89
RAB40C-206ENST00000561781 ZNF831Q5JPB2 1677 aa20.64■□□□□ 0.89
RAB40C-206ENST00000561781 CICQ96RK0 1608 aaPredicted RBP20.63■□□□□ 0.89
RAB40C-206ENST00000561781 RNF225M0QZC1 329 aaPredicted RBP20.63■□□□□ 0.89
RAB40C-206ENST00000561781 MKRN4PQ13434 485 aaPredicted RBP20.63■□□□□ 0.89
RAB40C-206ENST00000561781 SEC16BQ96JE7 1060 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms