RNA–Protein interactions for RNA: ENST00000561609.5

PKM-205, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 1,568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-205ENST00000561609 ZKSCAN4Q969J2 545 aaPredicted RBP12.87□□□□□ -0.35
PKM-205ENST00000561609 SDF4Q9BRK5 362 aa12.87□□□□□ -0.35
PKM-205ENST00000561609 TMEM60Q9H2L4 133 aa12.87□□□□□ -0.35
PKM-205ENST00000561609 AS3MTQ9HBK9 375 aa12.87□□□□□ -0.35
PKM-205ENST00000561609 PICK1Q9NRD5 415 aa12.87□□□□□ -0.35
PKM-205ENST00000561609 VWA3AA6NCI4 1184 aa12.86□□□□□ -0.35
PKM-205ENST00000561609 GLTPD2A6NH11 291 aa12.86□□□□□ -0.35
PKM-205ENST00000561609 CCNT1O60563 726 aaKnown RBP12.86□□□□□ -0.35
PKM-205ENST00000561609 LONP1P36776 959 aaKnown RBP12.86□□□□□ -0.35
PKM-205ENST00000561609 USP14P54578 494 aa12.86□□□□□ -0.35
PKM-205ENST00000561609 USH1GQ495M9 461 aa12.86□□□□□ -0.35
PKM-205ENST00000561609 LONRF3Q496Y0 759 aa12.86□□□□□ -0.35
PKM-205ENST00000561609 MCTP2Q6DN12 878 aa12.86□□□□□ -0.35
PKM-205ENST00000561609 KRBA2Q6ZNG9 492 aa12.86□□□□□ -0.35
PKM-205ENST00000561609 USP49Q70CQ1 688 aa12.86□□□□□ -0.35
PKM-205ENST00000561609 SULF1Q8IWU6 871 aa12.86□□□□□ -0.35
PKM-205ENST00000561609 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.86□□□□□ -0.35
PKM-205ENST00000561609 ZC3H15Q8WU90 426 aaKnown RBP12.86□□□□□ -0.35
PKM-205ENST00000561609 KIFC2Q96AC6 838 aa12.86□□□□□ -0.35
PKM-205ENST00000561609 FBXO28Q9NVF7 368 aa12.86□□□□□ -0.35
PKM-205ENST00000561609 FZD1Q9UP38 647 aa12.86□□□□□ -0.35
PKM-205ENST00000561609 SCN4AP35499 1836 aa12.86□□□□□ -0.35
PKM-205ENST00000561609 USP17L15C9J2P7 530 aa12.86□□□□□ -0.35
PKM-205ENST00000561609 USP17L13C9JLJ4 530 aa12.86□□□□□ -0.35
PKM-205ENST00000561609 ADM5C9JUS6 153 aa12.86□□□□□ -0.35
PKM-205ENST00000561609 USP17L11C9JVI0 530 aa12.86□□□□□ -0.35
PKM-205ENST00000561609 USP17L18D6R9N7 530 aa12.86□□□□□ -0.35
PKM-205ENST00000561609 USP17L22D6RA61 530 aa12.86□□□□□ -0.35
PKM-205ENST00000561609 USP17L17D6RBQ6 530 aa12.86□□□□□ -0.35
PKM-205ENST00000561609 USP17L19D6RCP7 530 aa12.86□□□□□ -0.35
PKM-205ENST00000561609 USP17L20D6RJB6 530 aa12.86□□□□□ -0.35
PKM-205ENST00000561609 MEIS2O14770 477 aa12.86□□□□□ -0.35
PKM-205ENST00000561609 OPLAHO14841 1288 aa12.86□□□□□ -0.35
PKM-205ENST00000561609 USP2O75604 605 aaPredicted RBP12.86□□□□□ -0.35
PKM-205ENST00000561609 EPHX2P34913 555 aa12.86□□□□□ -0.35
PKM-205ENST00000561609 BACE1P56817 501 aa12.86□□□□□ -0.35
PKM-205ENST00000561609 USP17L24Q0WX57 530 aa12.86□□□□□ -0.35
PKM-205ENST00000561609 AP3B2Q13367 1082 aa12.86□□□□□ -0.35
PKM-205ENST00000561609 MTMR2Q13614 643 aa12.86□□□□□ -0.35
PKM-205ENST00000561609 USP17L6PQ6QN14 398 aa12.86□□□□□ -0.35
PKM-205ENST00000561609 ZNF280CQ8ND82 737 aa12.86□□□□□ -0.35
PKM-205ENST00000561609 SYMPKQ92797 1274 aaKnown RBP12.86□□□□□ -0.35
PKM-205ENST00000561609 EPSTI1Q96J88 318 aa12.86□□□□□ -0.35
PKM-205ENST00000561609 PANK2Q9BZ23 570 aa12.86□□□□□ -0.35
PKM-205ENST00000561609 EMILIN3Q9NT22 766 aa12.86□□□□□ -0.35
PKM-205ENST00000561609 KIAA1468Q9P260 1216 aa12.86□□□□□ -0.35
PKM-205ENST00000561609 UTRNP46939 3433 aa12.85□□□□□ -0.35
PKM-205ENST00000561609 POLR2DO15514 142 aaKnown RBP12.85□□□□□ -0.35
PKM-205ENST00000561609 NEMFO60524 1076 aa12.85□□□□□ -0.35
PKM-205ENST00000561609 OR52Z1P0C646 297 aa12.85□□□□□ -0.35
PKM-205ENST00000561609 VCAM1P19320 739 aa12.85□□□□□ -0.35
PKM-205ENST00000561609 SPP2Q13103 211 aa12.85□□□□□ -0.35
PKM-205ENST00000561609 PPP4R3AQ6IN85 833 aa12.85□□□□□ -0.35
PKM-205ENST00000561609 DTHD1Q6ZMT9 781 aa12.85□□□□□ -0.35
PKM-205ENST00000561609 PRPF38AQ8NAV1 312 aaKnown RBP12.85□□□□□ -0.35
PKM-205ENST00000561609 RNF214Q8ND24 703 aa12.85□□□□□ -0.35
PKM-205ENST00000561609 CNNM3Q8NE01 707 aa12.85□□□□□ -0.35
PKM-205ENST00000561609 C12orf42Q96LP6 360 aa12.85□□□□□ -0.35
PKM-205ENST00000561609 SLF1Q9BQI6 1058 aa12.85□□□□□ -0.35
PKM-205ENST00000561609 MYH7BA7E2Y1 1941 aa12.84□□□□□ -0.35
PKM-205ENST00000561609 WDR90Q96KV7 1748 aa12.84□□□□□ -0.35
PKM-205ENST00000561609 A0A087X0B3 334 aa12.84□□□□□ -0.35
PKM-205ENST00000561609 PIK3CDO00329 1044 aa12.84□□□□□ -0.35
PKM-205ENST00000561609 ACTN4O43707 911 aaKnown RBP12.84□□□□□ -0.35
PKM-205ENST00000561609 TAL1P17542 331 aaPredicted RBP12.84□□□□□ -0.35
PKM-205ENST00000561609 DGKZQ13574 1117 aa12.84□□□□□ -0.35
PKM-205ENST00000561609 UVSSAQ2YD98 709 aa12.84□□□□□ -0.35
PKM-205ENST00000561609 CCDC174Q6PII3 467 aa12.84□□□□□ -0.35
PKM-205ENST00000561609 KRT26Q7Z3Y9 468 aa12.84□□□□□ -0.35
PKM-205ENST00000561609 NAP1L4Q99733 375 aaKnown RBP12.84□□□□□ -0.35
PKM-205ENST00000561609 ANO3Q9BYT9 981 aa12.84□□□□□ -0.35
PKM-205ENST00000561609 SERTAD1Q9UHV2 236 aa12.84□□□□□ -0.35
PKM-205ENST00000561609 ZHX2Q9Y6X8 837 aa12.84□□□□□ -0.35
PKM-205ENST00000561609 PARP14Q460N5 1801 aa12.84□□□□□ -0.35
PKM-205ENST00000561609 OTOFQ9HC10 1997 aa12.84□□□□□ -0.35
PKM-205ENST00000561609 C19orf81C9J6K1 198 aa12.83□□□□□ -0.36
PKM-205ENST00000561609 TDP2O95551 362 aa12.83□□□□□ -0.36
PKM-205ENST00000561609 FOSP01100 380 aaPredicted RBP12.83□□□□□ -0.36
PKM-205ENST00000561609 GCFC2P16383 781 aaKnown RBP12.83□□□□□ -0.36
PKM-205ENST00000561609 USP11P51784 963 aa12.83□□□□□ -0.36
PKM-205ENST00000561609 MAP3K9P80192 1104 aa12.83□□□□□ -0.36
PKM-205ENST00000561609 MDM2Q00987 491 aaPredicted RBP12.83□□□□□ -0.36
PKM-205ENST00000561609 STX1AQ16623 288 aa12.83□□□□□ -0.36
PKM-205ENST00000561609 ANO6Q4KMQ2 910 aa12.83□□□□□ -0.36
PKM-205ENST00000561609 KANK3Q6NY19 840 aa12.83□□□□□ -0.36
PKM-205ENST00000561609 DLK2Q6UY11 383 aa12.83□□□□□ -0.36
PKM-205ENST00000561609 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.83□□□□□ -0.36
PKM-205ENST00000561609 POTEDQ86YR6 584 aa12.83□□□□□ -0.36
PKM-205ENST00000561609 FAM200AQ8TCP9 573 aa12.83□□□□□ -0.36
PKM-205ENST00000561609 CRYGNQ8WXF5 182 aa12.83□□□□□ -0.36
PKM-205ENST00000561609 ERCC4Q92889 916 aaPredicted RBP12.83□□□□□ -0.36
PKM-205ENST00000561609 MTMR9Q96QG7 549 aa12.83□□□□□ -0.36
PKM-205ENST00000561609 P2RX7Q99572 595 aaKnown RBP12.83□□□□□ -0.36
PKM-205ENST00000561609 RPAP3Q9H6T3 665 aaPredicted RBP12.83□□□□□ -0.36
PKM-205ENST00000561609 USP25Q9UHP3 1055 aa12.83□□□□□ -0.36
PKM-205ENST00000561609 TUBE1Q9UJT0 475 aa12.83□□□□□ -0.36
PKM-205ENST00000561609 MRPL11Q9Y3B7 192 aaKnown RBP12.83□□□□□ -0.36
PKM-205ENST00000561609 SNCAIPQ9Y6H5 919 aa12.83□□□□□ -0.36
PKM-205ENST00000561609 ZNF536O15090 1300 aa12.83□□□□□ -0.36
PKM-205ENST00000561609 ABCB11O95342 1321 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms