RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 HERVK_113Q902F9 699 aa14.03□□□□□ -0.16
CARMIL3-204ENST00000561354 FSD1Q9BTV5 496 aa14.03□□□□□ -0.16
CARMIL3-204ENST00000561354 IL23AQ9NPF7 189 aa14.03□□□□□ -0.16
CARMIL3-204ENST00000561354 IL17RBQ9NRM6 502 aa14.03□□□□□ -0.16
CARMIL3-204ENST00000561354 ISY1Q9ULR0 285 aaKnown RBP14.03□□□□□ -0.16
CARMIL3-204ENST00000561354 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.03□□□□□ -0.16
CARMIL3-204ENST00000561354 GRXCR1A8MXD5 290 aa14.02□□□□□ -0.17
CARMIL3-204ENST00000561354 ZEB2O60315 1214 aa14.02□□□□□ -0.17
CARMIL3-204ENST00000561354 ACRP10323 421 aa14.02□□□□□ -0.17
CARMIL3-204ENST00000561354 ALAS1P13196 640 aa14.02□□□□□ -0.17
CARMIL3-204ENST00000561354 SMPD1P17405 629 aa14.02□□□□□ -0.17
CARMIL3-204ENST00000561354 CYP2C18P33260 490 aa14.02□□□□□ -0.17
CARMIL3-204ENST00000561354 PBX2P40425 430 aa14.02□□□□□ -0.17
CARMIL3-204ENST00000561354 NOVP48745 357 aa14.02□□□□□ -0.17
CARMIL3-204ENST00000561354 ITGA7Q13683 1181 aa14.02□□□□□ -0.17
CARMIL3-204ENST00000561354 FSCN1Q16658 493 aaKnown RBP14.02□□□□□ -0.17
CARMIL3-204ENST00000561354 USP38Q8NB14 1042 aa14.02□□□□□ -0.17
CARMIL3-204ENST00000561354 AP5M1Q9H0R1 490 aa14.02□□□□□ -0.17
CARMIL3-204ENST00000561354 MTIF3Q9H2K0 278 aaKnown RBP14.02□□□□□ -0.17
CARMIL3-204ENST00000561354 CYP39A1Q9NYL5 469 aa14.02□□□□□ -0.17
CARMIL3-204ENST00000561354 PRR12Q9ULL5 1215 aa14.02□□□□□ -0.17
CARMIL3-204ENST00000561354 STX8Q9UNK0 236 aa14.02□□□□□ -0.17
CARMIL3-204ENST00000561354 GRIN2DO15399 1336 aa14.01□□□□□ -0.17
CARMIL3-204ENST00000561354 TSPY2A6NKD2 308 aa14.01□□□□□ -0.17
CARMIL3-204ENST00000561354 FOXP2O15409 715 aa14.01□□□□□ -0.17
CARMIL3-204ENST00000561354 DYNC1LI2O43237 492 aaPredicted RBP14.01□□□□□ -0.17
CARMIL3-204ENST00000561354 RAB30Q15771 203 aa14.01□□□□□ -0.17
CARMIL3-204ENST00000561354 TJAP1Q5JTD0 557 aa14.01□□□□□ -0.17
CARMIL3-204ENST00000561354 AKNAD1Q5T1N1 836 aa14.01□□□□□ -0.17
CARMIL3-204ENST00000561354 TAPT1Q6NXT6 567 aa14.01□□□□□ -0.17
CARMIL3-204ENST00000561354 KCTD1Q719H9 257 aa14.01□□□□□ -0.17
CARMIL3-204ENST00000561354 MORC4Q8TE76 937 aa14.01□□□□□ -0.17
CARMIL3-204ENST00000561354 GAS2L1Q99501 681 aaPredicted RBP14.01□□□□□ -0.17
CARMIL3-204ENST00000561354 HIPK3Q9H422 1215 aa14.01□□□□□ -0.17
CARMIL3-204ENST00000561354 PRDM6Q9NQX0 595 aa14.01□□□□□ -0.17
CARMIL3-204ENST00000561354 CDH23Q9H251 3354 aa14.01□□□□□ -0.17
CARMIL3-204ENST00000561354 FGBP02675 491 aa14□□□□□ -0.17
CARMIL3-204ENST00000561354 ICAM1P05362 532 aa14□□□□□ -0.17
CARMIL3-204ENST00000561354 MUM1L1Q5H9M0 696 aa14□□□□□ -0.17
CARMIL3-204ENST00000561354 OTUD7AQ8TE49 926 aaPredicted RBP14□□□□□ -0.17
CARMIL3-204ENST00000561354 VTA1Q9NP79 307 aa14□□□□□ -0.17
CARMIL3-204ENST00000561354 PDGFCQ9NRA1 345 aa14□□□□□ -0.17
CARMIL3-204ENST00000561354 MSRAQ9UJ68 235 aa14□□□□□ -0.17
CARMIL3-204ENST00000561354 ANAPC4Q9UJX5 808 aa14□□□□□ -0.17
CARMIL3-204ENST00000561354 LRRC37A2A6NM11 1700 aa13.99□□□□□ -0.17
CARMIL3-204ENST00000561354 EYSQ5T1H1 3165 aa13.99□□□□□ -0.17
CARMIL3-204ENST00000561354 LOC102724159A0A0B4J2E5 919 aa13.99□□□□□ -0.17
CARMIL3-204ENST00000561354 ORC4O43929 436 aa13.99□□□□□ -0.17
CARMIL3-204ENST00000561354 NMT2O60551 498 aa13.99□□□□□ -0.17
CARMIL3-204ENST00000561354 FGRP09769 529 aa13.99□□□□□ -0.17
CARMIL3-204ENST00000561354 MX1P20591 662 aa13.99□□□□□ -0.17
CARMIL3-204ENST00000561354 SNAP25P60880 206 aa13.99□□□□□ -0.17
CARMIL3-204ENST00000561354 CTDSPL2Q05D32 466 aa13.99□□□□□ -0.17
CARMIL3-204ENST00000561354 PWP2Q15269 919 aaKnown RBP13.99□□□□□ -0.17
CARMIL3-204ENST00000561354 BTNL9Q6UXG8 535 aa13.99□□□□□ -0.17
CARMIL3-204ENST00000561354 FBXO16Q8IX29 292 aaPredicted RBP13.99□□□□□ -0.17
CARMIL3-204ENST00000561354 DCAF4Q8WV16 495 aa13.99□□□□□ -0.17
CARMIL3-204ENST00000561354 ATXN2LQ8WWM7 1075 aaKnown RBP13.99□□□□□ -0.17
CARMIL3-204ENST00000561354 CHMP4CQ96CF2 233 aa13.99□□□□□ -0.17
CARMIL3-204ENST00000561354 NOC4LQ9BVI4 516 aaKnown RBP13.99□□□□□ -0.17
CARMIL3-204ENST00000561354 RANBP17Q9H2T7 1088 aaKnown RBP13.99□□□□□ -0.17
CARMIL3-204ENST00000561354 PRDM12Q9H4Q4 367 aa13.99□□□□□ -0.17
CARMIL3-204ENST00000561354 INCENPQ9NQS7 918 aa13.99□□□□□ -0.17
CARMIL3-204ENST00000561354 CXXC1Q9P0U4 656 aaPredicted RBP13.99□□□□□ -0.17
CARMIL3-204ENST00000561354 ADD3Q9UEY8 706 aaKnown RBP13.99□□□□□ -0.17
CARMIL3-204ENST00000561354 CCPG1Q9ULG6 757 aa13.99□□□□□ -0.17
CARMIL3-204ENST00000561354 PCDHB15Q9Y5E8 787 aa13.99□□□□□ -0.17
CARMIL3-204ENST00000561354 UMODL1Q5DID0 1318 aa13.98□□□□□ -0.17
CARMIL3-204ENST00000561354 B4GALT4O60513 344 aa13.98□□□□□ -0.17
CARMIL3-204ENST00000561354 RANBP6O60518 1105 aaKnown RBP13.98□□□□□ -0.17
CARMIL3-204ENST00000561354 ALX1Q15699 326 aa13.98□□□□□ -0.17
CARMIL3-204ENST00000561354 DUSP28Q4G0W2 176 aa13.98□□□□□ -0.17
CARMIL3-204ENST00000561354 NSMFQ6X4W1 530 aa13.98□□□□□ -0.17
CARMIL3-204ENST00000561354 KIAA1211Q6ZU35 1233 aa13.98□□□□□ -0.17
CARMIL3-204ENST00000561354 EEPD1Q7L9B9 569 aa13.98□□□□□ -0.17
CARMIL3-204ENST00000561354 RPUSD2Q8IZ73 545 aaKnown RBP13.98□□□□□ -0.17
CARMIL3-204ENST00000561354 TRPV6Q9H1D0 765 aa13.98□□□□□ -0.17
CARMIL3-204ENST00000561354 DDX49Q9Y6V7 483 aaKnown RBP13.98□□□□□ -0.17
CARMIL3-204ENST00000561354 SALL3Q9BXA9 1300 aa13.97□□□□□ -0.17
CARMIL3-204ENST00000561354 PTGS1P23219 599 aa13.97□□□□□ -0.17
CARMIL3-204ENST00000561354 PSMC6P62333 389 aa13.97□□□□□ -0.17
CARMIL3-204ENST00000561354 BAATQ14032 418 aaPredicted RBP13.97□□□□□ -0.17
CARMIL3-204ENST00000561354 ADGRE1Q14246 886 aa13.97□□□□□ -0.17
CARMIL3-204ENST00000561354 TMEM63BQ5T3F8 832 aa13.97□□□□□ -0.17
CARMIL3-204ENST00000561354 RASGRP2Q7LDG7 609 aa13.97□□□□□ -0.17
CARMIL3-204ENST00000561354 OTOP2Q7RTS6 562 aa13.97□□□□□ -0.17
CARMIL3-204ENST00000561354 EVI5LQ96CN4 794 aa13.97□□□□□ -0.17
CARMIL3-204ENST00000561354 PURBQ96QR8 312 aaKnown RBP13.97□□□□□ -0.17
CARMIL3-204ENST00000561354 WNT8AQ9H1J5 351 aa13.97□□□□□ -0.17
CARMIL3-204ENST00000561354 SLC28A3Q9HAS3 691 aa13.97□□□□□ -0.17
CARMIL3-204ENST00000561354 POLR3EQ9NVU0 708 aa13.97□□□□□ -0.17
CARMIL3-204ENST00000561354 PNMA2Q9UL42 364 aa13.97□□□□□ -0.17
CARMIL3-204ENST00000561354 VCANP13611 3396 aa13.97□□□□□ -0.17
CARMIL3-204ENST00000561354 RBM47A0AV96 593 aaKnown RBP13.96□□□□□ -0.17
CARMIL3-204ENST00000561354 TNFRSF10AO00220 468 aa13.96□□□□□ -0.17
CARMIL3-204ENST00000561354 SUPT20HL2P0C7V6 817 aa13.96□□□□□ -0.17
CARMIL3-204ENST00000561354 TOP1P11387 765 aaKnown RBP13.96□□□□□ -0.17
CARMIL3-204ENST00000561354 ALDH5A1P51649 535 aaPredicted RBP13.96□□□□□ -0.17
CARMIL3-204ENST00000561354 CCL23P55773 120 aa13.96□□□□□ -0.17
CARMIL3-204ENST00000561354 CCDC96Q2M329 555 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms