RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 LHX8Q68G74 356 aa16.21■□□□□ 0.19
TPM1-230ENST00000561266 CCDC144CPQ8IYA2 1237 aa16.21■□□□□ 0.19
TPM1-230ENST00000561266 TRMT44Q8IYL2 757 aaKnown RBP16.21■□□□□ 0.19
TPM1-230ENST00000561266 ANKRD35Q8N283 1001 aa16.21■□□□□ 0.19
TPM1-230ENST00000561266 FAM133AQ8N9E0 248 aa16.21■□□□□ 0.19
TPM1-230ENST00000561266 DDX11Q96FC9 970 aa16.21■□□□□ 0.19
TPM1-230ENST00000561266 CRISPLD2Q9H0B8 497 aa16.21■□□□□ 0.19
TPM1-230ENST00000561266 RIOX1Q9H6W3 641 aa16.21■□□□□ 0.19
TPM1-230ENST00000561266 HMX1Q9NP08 348 aaPredicted RBP16.21■□□□□ 0.19
TPM1-230ENST00000561266 OPLAHO14841 1288 aa16.2■□□□□ 0.18
TPM1-230ENST00000561266 SNAI1O95863 264 aaPredicted RBP16.2■□□□□ 0.18
TPM1-230ENST00000561266 MNX1P50219 401 aaPredicted RBP16.2■□□□□ 0.18
TPM1-230ENST00000561266 MFSD14CQ5VZR4 134 aa16.2■□□□□ 0.18
TPM1-230ENST00000561266 CATIPQ7Z7H3 387 aa16.2■□□□□ 0.18
TPM1-230ENST00000561266 SGMS1Q86VZ5 419 aa16.2■□□□□ 0.18
TPM1-230ENST00000561266 PIGSQ96S52 555 aa16.2■□□□□ 0.18
TPM1-230ENST00000561266 CYP39A1Q9NYL5 469 aa16.2■□□□□ 0.18
TPM1-230ENST00000561266 FBXO40Q9UH90 709 aa16.2■□□□□ 0.18
TPM1-230ENST00000561266 DIS3Q9Y2L1 958 aaKnown RBP16.2■□□□□ 0.18
TPM1-230ENST00000561266 WDR19Q8NEZ3 1342 aa16.19■□□□□ 0.18
TPM1-230ENST00000561266 LRRC37A2A6NM11 1700 aa16.19■□□□□ 0.18
TPM1-230ENST00000561266 DDAH1O94760 285 aa16.19■□□□□ 0.18
TPM1-230ENST00000561266 BAATQ14032 418 aaPredicted RBP16.19■□□□□ 0.18
TPM1-230ENST00000561266 KRT32Q14532 448 aa16.19■□□□□ 0.18
TPM1-230ENST00000561266 ANO1Q5XXA6 986 aa16.19■□□□□ 0.18
TPM1-230ENST00000561266 NSMFQ6X4W1 530 aa16.19■□□□□ 0.18
TPM1-230ENST00000561266 SLC30A10Q6XR72 485 aa16.19■□□□□ 0.18
TPM1-230ENST00000561266 NFXL1Q6ZNB6 911 aa16.19■□□□□ 0.18
TPM1-230ENST00000561266 UBE2Q1Q7Z7E8 422 aa16.19■□□□□ 0.18
TPM1-230ENST00000561266 SRBD1Q8N5C6 995 aaKnown RBP16.19■□□□□ 0.18
TPM1-230ENST00000561266 PIBF1Q8WXW3 757 aa16.19■□□□□ 0.18
TPM1-230ENST00000561266 TINF2Q9BSI4 451 aa16.19■□□□□ 0.18
TPM1-230ENST00000561266 ALPK3Q96L96 1907 aa16.19■□□□□ 0.18
TPM1-230ENST00000561266 CCDC69A6NI79 296 aa16.18■□□□□ 0.18
TPM1-230ENST00000561266 EPB41L2O43491 1005 aaKnown RBP16.18■□□□□ 0.18
TPM1-230ENST00000561266 DHX16O60231 1041 aaKnown RBP16.18■□□□□ 0.18
TPM1-230ENST00000561266 ZNF865P0CJ78 1059 aaPredicted RBP16.18■□□□□ 0.18
TPM1-230ENST00000561266 RPS6KB1P23443 525 aa16.18■□□□□ 0.18
TPM1-230ENST00000561266 C8orf34Q49A92 452 aa16.18■□□□□ 0.18
TPM1-230ENST00000561266 APOA5Q6Q788 366 aa16.18■□□□□ 0.18
TPM1-230ENST00000561266 MAMDC4Q6UXC1 1216 aa16.18■□□□□ 0.18
TPM1-230ENST00000561266 Q6ZUG5 572 aa16.18■□□□□ 0.18
TPM1-230ENST00000561266 DIS3LQ8TF46 1054 aaKnown RBP16.18■□□□□ 0.18
TPM1-230ENST00000561266 KATNBL1Q9H079 304 aa16.18■□□□□ 0.18
TPM1-230ENST00000561266 FAM217BQ9NTX9 383 aaPredicted RBP16.18■□□□□ 0.18
TPM1-230ENST00000561266 POTEB2H3BUK9 544 aa16.17■□□□□ 0.18
TPM1-230ENST00000561266 ADCY6O43306 1168 aa16.17■□□□□ 0.18
TPM1-230ENST00000561266 TFRCP02786 760 aaKnown RBP16.17■□□□□ 0.18
TPM1-230ENST00000561266 CASTP20810 708 aaKnown RBP16.17■□□□□ 0.18
TPM1-230ENST00000561266 CNGA1P29973 690 aa16.17■□□□□ 0.18
TPM1-230ENST00000561266 APOBRQ0VD83 1088 aa16.17■□□□□ 0.18
TPM1-230ENST00000561266 BLOC1S2Q6QNY1 142 aa16.17■□□□□ 0.18
TPM1-230ENST00000561266 MICU3Q86XE3 530 aa16.17■□□□□ 0.18
TPM1-230ENST00000561266 FBXO11Q86XK2 927 aa16.17■□□□□ 0.18
TPM1-230ENST00000561266 HOMER1Q86YM7 354 aa16.17■□□□□ 0.18
TPM1-230ENST00000561266 TMTC2Q8N394 836 aa16.17■□□□□ 0.18
TPM1-230ENST00000561266 LENG1Q96BZ8 264 aaPredicted RBP16.17■□□□□ 0.18
TPM1-230ENST00000561266 MAP3K14Q99558 947 aa16.17■□□□□ 0.18
TPM1-230ENST00000561266 ZSWIM6Q9HCJ5 1215 aa16.17■□□□□ 0.18
TPM1-230ENST00000561266 SLC5A4Q9NY91 659 aa16.17■□□□□ 0.18
TPM1-230ENST00000561266 COL20A1Q9P218 1284 aa16.17■□□□□ 0.18
TPM1-230ENST00000561266 SLC12A7Q9Y666 1083 aa16.17■□□□□ 0.18
TPM1-230ENST00000561266 PDE4DIPQ5VU43 2346 aa16.17■□□□□ 0.18
TPM1-230ENST00000561266 hCG_1642624A0A1W2PR95 340 aa16.16■□□□□ 0.18
TPM1-230ENST00000561266 ZBTB5O15062 677 aa16.16■□□□□ 0.18
TPM1-230ENST00000561266 PTGS1P23219 599 aa16.16■□□□□ 0.18
TPM1-230ENST00000561266 CDC27P30260 824 aa16.16■□□□□ 0.18
TPM1-230ENST00000561266 RPS6P62753 249 aaKnown RBP16.16■□□□□ 0.18
TPM1-230ENST00000561266 MLLT1Q03111 559 aaPredicted RBP16.16■□□□□ 0.18
TPM1-230ENST00000561266 ARMCX2Q7L311 632 aa16.16■□□□□ 0.18
TPM1-230ENST00000561266 ZNF467Q7Z7K2 595 aaPredicted RBP16.16■□□□□ 0.18
TPM1-230ENST00000561266 FANCBQ8NB91 859 aa16.16■□□□□ 0.18
TPM1-230ENST00000561266 LARP6Q9BRS8 491 aaKnown RBP16.16■□□□□ 0.18
TPM1-230ENST00000561266 OGDHLQ9ULD0 1010 aa16.16■□□□□ 0.18
TPM1-230ENST00000561266 PFASO15067 1338 aa16.16■□□□□ 0.18
TPM1-230ENST00000561266 KLF18A0A0U1RQI7 1052 aa16.15■□□□□ 0.18
TPM1-230ENST00000561266 PTPDC1A2A3K4 754 aa16.15■□□□□ 0.18
TPM1-230ENST00000561266 CALML3P27482 149 aa16.15■□□□□ 0.18
TPM1-230ENST00000561266 IRX5P78411 483 aaPredicted RBP16.15■□□□□ 0.18
TPM1-230ENST00000561266 FUT2Q10981 343 aa16.15■□□□□ 0.18
TPM1-230ENST00000561266 TOB2Q14106 344 aaPredicted RBP16.15■□□□□ 0.18
TPM1-230ENST00000561266 TMEM63BQ5T3F8 832 aa16.15■□□□□ 0.18
TPM1-230ENST00000561266 RNF207Q6ZRF8 634 aa16.15■□□□□ 0.18
TPM1-230ENST00000561266 CCDC82Q8N4S0 544 aa16.15■□□□□ 0.18
TPM1-230ENST00000561266 CTCFLQ8NI51 663 aaPredicted RBP16.15■□□□□ 0.18
TPM1-230ENST00000561266 BRF1Q92994 677 aa16.15■□□□□ 0.18
TPM1-230ENST00000561266 SPZ1Q9BXG8 430 aa16.15■□□□□ 0.18
TPM1-230ENST00000561266 AGXT2Q9BYV1 514 aa16.15■□□□□ 0.18
TPM1-230ENST00000561266 UPF3BQ9BZI7 483 aaKnown RBP16.15■□□□□ 0.18
TPM1-230ENST00000561266 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.15■□□□□ 0.18
TPM1-230ENST00000561266 DDX20Q9UHI6 824 aaKnown RBP16.15■□□□□ 0.18
TPM1-230ENST00000561266 ABCB11O95342 1321 aa16.15■□□□□ 0.18
TPM1-230ENST00000561266 SYNGAP1Q96PV0 1343 aa16.15■□□□□ 0.18
TPM1-230ENST00000561266 HMGB1P09429 215 aaKnown RBP16.14■□□□□ 0.17
TPM1-230ENST00000561266 TMTC3Q6ZXV5 915 aa16.14■□□□□ 0.17
TPM1-230ENST00000561266 RUFY3Q7L099 469 aa16.14■□□□□ 0.17
TPM1-230ENST00000561266 TAAR1Q96RJ0 339 aa16.14■□□□□ 0.17
TPM1-230ENST00000561266 AMNQ9BXJ7 453 aa16.14■□□□□ 0.17
TPM1-230ENST00000561266 PNMA6FA0A0J9YX94 578 aa16.13■□□□□ 0.17
TPM1-230ENST00000561266 SEPT4O43236 478 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms