RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 KAT14Q9H8E8 782 aa15.62■□□□□ 0.09
RABGGTA-220ENST00000560998 BCCIPQ9P287 314 aaKnown RBP eCLIP15.62■□□□□ 0.09
RABGGTA-220ENST00000560998 SERTAD1Q9UHV2 236 aa15.62■□□□□ 0.09
RABGGTA-220ENST00000560998 BBOX1O75936 387 aa15.62■□□□□ 0.09
RABGGTA-220ENST00000560998 BMP15O95972 392 aa15.62■□□□□ 0.09
RABGGTA-220ENST00000560998 HOXA10P31260 410 aaPredicted RBP15.62■□□□□ 0.09
RABGGTA-220ENST00000560998 CCT5P48643 541 aa15.62■□□□□ 0.09
RABGGTA-220ENST00000560998 USP14P54578 494 aa15.62■□□□□ 0.09
RABGGTA-220ENST00000560998 NEDD9Q14511 834 aa15.62■□□□□ 0.09
RABGGTA-220ENST00000560998 POSTNQ15063 836 aa15.62■□□□□ 0.09
RABGGTA-220ENST00000560998 PFKFB3Q16875 520 aaPredicted RBP15.62■□□□□ 0.09
RABGGTA-220ENST00000560998 USP49Q70CQ1 688 aa15.62■□□□□ 0.09
RABGGTA-220ENST00000560998 B4GALNT4Q76KP1 1039 aa15.62■□□□□ 0.09
RABGGTA-220ENST00000560998 TRIML1Q8N9V2 468 aa15.62■□□□□ 0.09
RABGGTA-220ENST00000560998 GIMAP7Q8NHV1 300 aa15.62■□□□□ 0.09
RABGGTA-220ENST00000560998 ZC3H4Q9UPT8 1303 aaKnown RBP15.61■□□□□ 0.09
RABGGTA-220ENST00000560998 A0A1B0GTH6 734 aa15.61■□□□□ 0.09
RABGGTA-220ENST00000560998 SOWAHDA6NJG2 315 aa15.61■□□□□ 0.09
RABGGTA-220ENST00000560998 WNT7AO00755 349 aa15.61■□□□□ 0.09
RABGGTA-220ENST00000560998 ACTN4O43707 911 aaKnown RBP15.61■□□□□ 0.09
RABGGTA-220ENST00000560998 FSBPO95073 299 aa15.61■□□□□ 0.09
RABGGTA-220ENST00000560998 BMP6P22004 513 aa15.61■□□□□ 0.09
RABGGTA-220ENST00000560998 IRAK1P51617 712 aa15.61■□□□□ 0.09
RABGGTA-220ENST00000560998 NR1I3Q14994 352 aa15.61■□□□□ 0.09
RABGGTA-220ENST00000560998 NT5DC1Q5TFE4 455 aa15.61■□□□□ 0.09
RABGGTA-220ENST00000560998 PPFIBP1Q86W92 1011 aa15.61■□□□□ 0.09
RABGGTA-220ENST00000560998 SLC35F6Q8N357 371 aa15.61■□□□□ 0.09
RABGGTA-220ENST00000560998 CRACR2AQ9BSW2 395 aa15.61■□□□□ 0.09
RABGGTA-220ENST00000560998 IRX2Q9BZI1 471 aaPredicted RBP15.61■□□□□ 0.09
RABGGTA-220ENST00000560998 MKNK2Q9HBH9 465 aa15.61■□□□□ 0.09
RABGGTA-220ENST00000560998 MAN1B1Q9UKM7 699 aa15.61■□□□□ 0.09
RABGGTA-220ENST00000560998 BRWD3Q6RI45 1802 aa15.61■□□□□ 0.09
RABGGTA-220ENST00000560998 EIF3HO15372 352 aaKnown RBP eCLIP15.6■□□□□ 0.09
RABGGTA-220ENST00000560998 CCDC178Q5BJE1 867 aa15.6■□□□□ 0.09
RABGGTA-220ENST00000560998 RAD9BQ6WBX8 426 aa15.6■□□□□ 0.09
RABGGTA-220ENST00000560998 PNMA1Q8ND90 353 aa15.6■□□□□ 0.09
RABGGTA-220ENST00000560998 TCP11L1Q9NUJ3 509 aa15.6■□□□□ 0.09
RABGGTA-220ENST00000560998 MYO6Q9UM54 1294 aa15.6■□□□□ 0.09
RABGGTA-220ENST00000560998 LRRC37AA6NMS7 1700 aa15.6■□□□□ 0.09
RABGGTA-220ENST00000560998 LTBP1Q14766 1721 aa15.6■□□□□ 0.09
RABGGTA-220ENST00000560998 DDX60LQ5H9U9 1706 aaKnown RBP15.6■□□□□ 0.09
RABGGTA-220ENST00000560998 GPR75-ASB3A0A0A6YYF3 556 aa15.6■□□□□ 0.09
RABGGTA-220ENST00000560998 POLRMTO00411 1230 aaKnown RBP15.6■□□□□ 0.09
RABGGTA-220ENST00000560998 VEGFAP15692 232 aaPredicted RBP15.6■□□□□ 0.09
RABGGTA-220ENST00000560998 BTDP43251 543 aa15.6■□□□□ 0.09
RABGGTA-220ENST00000560998 SARSP49591 514 aaKnown RBP15.6■□□□□ 0.09
RABGGTA-220ENST00000560998 NLRP5P59047 1200 aa15.6■□□□□ 0.09
RABGGTA-220ENST00000560998 AMPD2Q01433 879 aa15.6■□□□□ 0.09
RABGGTA-220ENST00000560998 GRM4Q14833 912 aa15.6■□□□□ 0.09
RABGGTA-220ENST00000560998 MTF1Q14872 753 aa15.6■□□□□ 0.09
RABGGTA-220ENST00000560998 TTC38Q5R3I4 469 aa15.6■□□□□ 0.09
RABGGTA-220ENST00000560998 KANK3Q6NY19 840 aa15.6■□□□□ 0.09
RABGGTA-220ENST00000560998 CNGA4Q8IV77 575 aa15.6■□□□□ 0.09
RABGGTA-220ENST00000560998 MAPKAPK5Q8IW41 473 aa15.6■□□□□ 0.09
RABGGTA-220ENST00000560998 TBC1D16Q8TBP0 767 aa15.6■□□□□ 0.09
RABGGTA-220ENST00000560998 RUBCNQ92622 972 aa15.6■□□□□ 0.09
RABGGTA-220ENST00000560998 FERMT2Q96AC1 680 aa15.6■□□□□ 0.09
RABGGTA-220ENST00000560998 CRAMP1Q96RY5 1269 aa15.6■□□□□ 0.09
RABGGTA-220ENST00000560998 QTRT2Q9H974 415 aaKnown RBP15.6■□□□□ 0.09
RABGGTA-220ENST00000560998 POLLQ9UGP5 575 aa15.6■□□□□ 0.09
RABGGTA-220ENST00000560998 SAP30BPQ9UHR5 308 aaKnown RBP15.6■□□□□ 0.09
RABGGTA-220ENST00000560998 NFE2L3Q9Y4A8 694 aa15.6■□□□□ 0.09
RABGGTA-220ENST00000560998 USP17L3A6NCW0 530 aa15.59■□□□□ 0.09
RABGGTA-220ENST00000560998 USP17L4A6NCW7 530 aa15.59■□□□□ 0.09
RABGGTA-220ENST00000560998 GOLGA6CA6NDK9 693 aa15.59■□□□□ 0.09
RABGGTA-220ENST00000560998 GOLGA6DP0CG33 693 aa15.59■□□□□ 0.09
RABGGTA-220ENST00000560998 ARHGAP25P42331 645 aa15.59■□□□□ 0.09
RABGGTA-220ENST00000560998 PLCD1P51178 756 aa15.59■□□□□ 0.09
RABGGTA-220ENST00000560998 ZNF174Q15697 407 aa15.59■□□□□ 0.09
RABGGTA-220ENST00000560998 FBXW10Q5XX13 1052 aa15.59■□□□□ 0.09
RABGGTA-220ENST00000560998 USP17L1Q7RTZ2 530 aa15.59■□□□□ 0.09
RABGGTA-220ENST00000560998 SLC44A5Q8NCS7 719 aa15.59■□□□□ 0.09
RABGGTA-220ENST00000560998 CAPS2Q9BXY5 557 aa15.59■□□□□ 0.09
RABGGTA-220ENST00000560998 GOLGA6AQ9NYA3 693 aa15.59■□□□□ 0.09
RABGGTA-220ENST00000560998 KLRG2A4D1S0 409 aaPredicted RBP15.58■□□□□ 0.09
RABGGTA-220ENST00000560998 GOLGA8KD6RF30 607 aa15.58■□□□□ 0.09
RABGGTA-220ENST00000560998 CHUKO15111 745 aa15.58■□□□□ 0.09
RABGGTA-220ENST00000560998 TSPY3P0CV98 308 aa15.58■□□□□ 0.09
RABGGTA-220ENST00000560998 TSPY8P0CW00 308 aa15.58■□□□□ 0.09
RABGGTA-220ENST00000560998 RASA1P20936 1047 aa15.58■□□□□ 0.09
RABGGTA-220ENST00000560998 MORC3Q14149 939 aa15.58■□□□□ 0.09
RABGGTA-220ENST00000560998 GRAMD1CQ8IYS0 662 aa15.58■□□□□ 0.09
RABGGTA-220ENST00000560998 ZNF444Q8N0Y2 327 aaPredicted RBP15.58■□□□□ 0.09
RABGGTA-220ENST00000560998 NOA1Q8NC60 698 aaKnown RBP15.58■□□□□ 0.09
RABGGTA-220ENST00000560998 PAGR1Q9BTK6 254 aa15.58■□□□□ 0.09
RABGGTA-220ENST00000560998 ITIH6Q6UXX5 1313 aa15.58■□□□□ 0.08
RABGGTA-220ENST00000560998 A0A087X0B3 334 aa15.58■□□□□ 0.08
RABGGTA-220ENST00000560998 KIF3CO14782 793 aa15.58■□□□□ 0.08
RABGGTA-220ENST00000560998 PPP1R12AO14974 1030 aaPredicted RBP15.58■□□□□ 0.08
RABGGTA-220ENST00000560998 MFAP3LO75121 409 aa15.58■□□□□ 0.08
RABGGTA-220ENST00000560998 KIAA0754O94854 1291 aa15.58■□□□□ 0.08
RABGGTA-220ENST00000560998 TRIM37O94972 964 aa15.58■□□□□ 0.08
RABGGTA-220ENST00000560998 ERCC5P28715 1186 aaPredicted RBP15.58■□□□□ 0.08
RABGGTA-220ENST00000560998 RDXP35241 583 aaKnown RBP15.58■□□□□ 0.08
RABGGTA-220ENST00000560998 TRAPPC10P48553 1259 aa15.58■□□□□ 0.08
RABGGTA-220ENST00000560998 ATP2C1P98194 919 aaPredicted RBP15.58■□□□□ 0.08
RABGGTA-220ENST00000560998 CKAP4Q07065 602 aaKnown RBP15.58■□□□□ 0.08
RABGGTA-220ENST00000560998 PLCB4Q15147 1175 aa15.58■□□□□ 0.08
RABGGTA-220ENST00000560998 MICALCLQ6ZW33 695 aa15.58■□□□□ 0.08
RABGGTA-220ENST00000560998 YTHDF3Q7Z739 585 aaKnown RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms