RNA–Protein interactions for RNA: ENST00000560927.1

CRTC3-210, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 2

Gene CRTC3, Length 2,463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-210ENST00000560927 FHOD1Q9Y613 1164 aa16.41■□□□□ 0.22
CRTC3-210ENST00000560927 MYL1P05976 194 aa16.41■□□□□ 0.22
CRTC3-210ENST00000560927 TEX35Q5T0J7 233 aa16.41■□□□□ 0.22
CRTC3-210ENST00000560927 TMTC1Q8IUR5 882 aa16.41■□□□□ 0.22
CRTC3-210ENST00000560927 SLF2Q8IX21 1173 aa16.41■□□□□ 0.22
CRTC3-210ENST00000560927 REXO1Q8N1G1 1221 aaKnown RBP16.41■□□□□ 0.22
CRTC3-210ENST00000560927 MB21D1Q8N884 522 aa16.41■□□□□ 0.22
CRTC3-210ENST00000560927 COA7Q96BR5 231 aa16.41■□□□□ 0.22
CRTC3-210ENST00000560927 CHP1Q99653 195 aa16.41■□□□□ 0.22
CRTC3-210ENST00000560927 TRIM9Q9C026 710 aa16.41■□□□□ 0.22
CRTC3-210ENST00000560927 RIOX1Q9H6W3 641 aa16.41■□□□□ 0.22
CRTC3-210ENST00000560927 SPATA31A6Q5VVP1 1343 aa16.4■□□□□ 0.22
CRTC3-210ENST00000560927 POLRMTO00411 1230 aaKnown RBP16.4■□□□□ 0.22
CRTC3-210ENST00000560927 PSMA7O14818 248 aa16.4■□□□□ 0.22
CRTC3-210ENST00000560927 KIF5CO60282 957 aa16.4■□□□□ 0.22
CRTC3-210ENST00000560927 AKR1B1P15121 316 aa16.4■□□□□ 0.22
CRTC3-210ENST00000560927 ZNF569Q5MCW4 686 aa16.4■□□□□ 0.22
CRTC3-210ENST00000560927 RSRC2Q7L4I2 434 aaKnown RBP16.4■□□□□ 0.22
CRTC3-210ENST00000560927 DUSP9Q99956 384 aaKnown RBP16.4■□□□□ 0.22
CRTC3-210ENST00000560927 DDX4Q9NQI0 724 aaKnown RBP16.4■□□□□ 0.22
CRTC3-210ENST00000560927 ST7Q9NRC1 585 aa16.4■□□□□ 0.22
CRTC3-210ENST00000560927 MTMR4Q9NYA4 1195 aa16.4■□□□□ 0.22
CRTC3-210ENST00000560927 TTC26A0AVF1 554 aa16.4■□□□□ 0.22
CRTC3-210ENST00000560927 LGALS16A8MUM7 142 aa16.4■□□□□ 0.22
CRTC3-210ENST00000560927 PES1O00541 588 aaKnown RBP16.4■□□□□ 0.22
CRTC3-210ENST00000560927 FCER1AP12319 257 aa16.4■□□□□ 0.22
CRTC3-210ENST00000560927 SMARCA1P28370 1054 aa16.4■□□□□ 0.22
CRTC3-210ENST00000560927 STK4Q13043 487 aa16.4■□□□□ 0.22
CRTC3-210ENST00000560927 CYP26C1Q6V0L0 522 aa16.4■□□□□ 0.22
CRTC3-210ENST00000560927 ZNF507Q8TCN5 953 aa16.4■□□□□ 0.22
CRTC3-210ENST00000560927 HPS3Q969F9 1004 aa16.4■□□□□ 0.22
CRTC3-210ENST00000560927 MXD3Q9BW11 206 aa16.4■□□□□ 0.22
CRTC3-210ENST00000560927 SEC31AO94979 1220 aaKnown RBP16.39■□□□□ 0.21
CRTC3-210ENST00000560927 ZRANB2O95218 330 aaKnown RBP eCLIP16.39■□□□□ 0.21
CRTC3-210ENST00000560927 GABPAQ06546 454 aa16.39■□□□□ 0.21
CRTC3-210ENST00000560927 PDE4DQ08499 809 aa16.39■□□□□ 0.21
CRTC3-210ENST00000560927 STIM1Q13586 685 aa16.39■□□□□ 0.21
CRTC3-210ENST00000560927 TRIM14Q14142 442 aa16.39■□□□□ 0.21
CRTC3-210ENST00000560927 CERS5Q8N5B7 392 aa16.39■□□□□ 0.21
CRTC3-210ENST00000560927 SLF1Q9BQI6 1058 aa16.39■□□□□ 0.21
CRTC3-210ENST00000560927 CUEDC2Q9H467 287 aa16.39■□□□□ 0.21
CRTC3-210ENST00000560927 THAP9Q9H5L6 903 aa16.39■□□□□ 0.21
CRTC3-210ENST00000560927 ZSWIM4Q9H7M6 989 aa16.39■□□□□ 0.21
CRTC3-210ENST00000560927 EDIL3O43854 480 aa16.39■□□□□ 0.21
CRTC3-210ENST00000560927 EEF1GP26641 437 aaKnown RBP16.39■□□□□ 0.21
CRTC3-210ENST00000560927 ARHGAP25P42331 645 aa16.39■□□□□ 0.21
CRTC3-210ENST00000560927 TXKP42681 527 aa16.39■□□□□ 0.21
CRTC3-210ENST00000560927 ASIC1P78348 528 aa16.39■□□□□ 0.21
CRTC3-210ENST00000560927 UTP14CQ5TAP6 766 aaKnown RBP16.39■□□□□ 0.21
CRTC3-210ENST00000560927 MEX3CQ5U5Q3 659 aaKnown RBP16.39■□□□□ 0.21
CRTC3-210ENST00000560927 DPP8Q6V1X1 898 aaPredicted RBP16.39■□□□□ 0.21
CRTC3-210ENST00000560927 CRAMP1Q96RY5 1269 aa16.39■□□□□ 0.21
CRTC3-210ENST00000560927 GTPBP4Q9BZE4 634 aaKnown RBP16.39■□□□□ 0.21
CRTC3-210ENST00000560927 TTF2Q9UNY4 1162 aaKnown RBP16.39■□□□□ 0.21
CRTC3-210ENST00000560927 AFF2P51816 1311 aa16.38■□□□□ 0.21
CRTC3-210ENST00000560927 B4DLN1 442 aa16.38■□□□□ 0.21
CRTC3-210ENST00000560927 ONECUT3O60422 494 aaPredicted RBP16.38■□□□□ 0.21
CRTC3-210ENST00000560927 TFRCP02786 760 aaKnown RBP16.38■□□□□ 0.21
CRTC3-210ENST00000560927 PNMA6AP0CW24 399 aaPredicted RBP16.38■□□□□ 0.21
CRTC3-210ENST00000560927 BMS1Q14692 1282 aaKnown RBP16.38■□□□□ 0.21
CRTC3-210ENST00000560927 ANKRD40Q6AI12 368 aa16.38■□□□□ 0.21
CRTC3-210ENST00000560927 CSGALNACT2Q8N6G5 542 aa16.38■□□□□ 0.21
CRTC3-210ENST00000560927 GPCPD1Q9NPB8 672 aa16.38■□□□□ 0.21
CRTC3-210ENST00000560927 ESYT2A0FGR8 921 aa16.38■□□□□ 0.21
CRTC3-210ENST00000560927 PPEF1O14829 653 aaPredicted RBP16.38■□□□□ 0.21
CRTC3-210ENST00000560927 NKRFO15226 690 aaKnown RBP eCLIP16.38■□□□□ 0.21
CRTC3-210ENST00000560927 SLC37A4O43826 429 aa16.38■□□□□ 0.21
CRTC3-210ENST00000560927 SLURP2P0DP57 97 aa16.38■□□□□ 0.21
CRTC3-210ENST00000560927 LTBP1Q14766 1721 aa16.38■□□□□ 0.21
CRTC3-210ENST00000560927 TMCO3Q6UWJ1 677 aa16.38■□□□□ 0.21
CRTC3-210ENST00000560927 SLC35F6Q8N357 371 aa16.38■□□□□ 0.21
CRTC3-210ENST00000560927 DHTKD1Q96HY7 919 aaPredicted RBP16.38■□□□□ 0.21
CRTC3-210ENST00000560927 C7orf25Q9BPX7 421 aa16.38■□□□□ 0.21
CRTC3-210ENST00000560927 MAGEF1Q9HAY2 307 aa16.38■□□□□ 0.21
CRTC3-210ENST00000560927 EXOC1Q9NV70 894 aa16.38■□□□□ 0.21
CRTC3-210ENST00000560927 ARGLU1Q9NWB6 273 aaPredicted RBP16.38■□□□□ 0.21
CRTC3-210ENST00000560927 PLIN4Q96Q06 1357 aa16.38■□□□□ 0.21
CRTC3-210ENST00000560927 KLRG2A4D1S0 409 aaPredicted RBP16.37■□□□□ 0.21
CRTC3-210ENST00000560927 TDP2O95551 362 aa16.37■□□□□ 0.21
CRTC3-210ENST00000560927 GPR161Q8N6U8 529 aaKnown RBP16.37■□□□□ 0.21
CRTC3-210ENST00000560927 P2RX5Q93086 422 aa16.37■□□□□ 0.21
CRTC3-210ENST00000560927 MTMR9Q96QG7 549 aa16.37■□□□□ 0.21
CRTC3-210ENST00000560927 REXO2Q9Y3B8 237 aaKnown RBP16.37■□□□□ 0.21
CRTC3-210ENST00000560927 FOCADQ5VW36 1801 aa16.37■□□□□ 0.21
CRTC3-210ENST00000560927 IGKV6D-41A0A0C4DH26 115 aa16.37■□□□□ 0.21
CRTC3-210ENST00000560927 KLK7P49862 253 aa16.37■□□□□ 0.21
CRTC3-210ENST00000560927 TUBGCP2Q9BSJ2 902 aa16.37■□□□□ 0.21
CRTC3-210ENST00000560927 MAGEC2Q9UBF1 373 aaPredicted RBP16.37■□□□□ 0.21
CRTC3-210ENST00000560927 PUF60Q9UHX1 559 aaKnown RBP16.37■□□□□ 0.21
CRTC3-210ENST00000560927 A0A1W2PQC6 194 aa16.36■□□□□ 0.21
CRTC3-210ENST00000560927 SNHG28P0DPA3 235 aa16.36■□□□□ 0.21
CRTC3-210ENST00000560927 CCNE1P24864 410 aa16.36■□□□□ 0.21
CRTC3-210ENST00000560927 SCNN1DP51172 638 aa16.36■□□□□ 0.21
CRTC3-210ENST00000560927 GRB10Q13322 594 aa16.36■□□□□ 0.21
CRTC3-210ENST00000560927 WDR59Q6PJI9 974 aa16.36■□□□□ 0.21
CRTC3-210ENST00000560927 KIAA0895Q8NCT3 520 aa16.36■□□□□ 0.21
CRTC3-210ENST00000560927 OR8K1Q8NGG5 319 aa16.36■□□□□ 0.21
CRTC3-210ENST00000560927 PARD6BQ9BYG5 372 aa16.36■□□□□ 0.21
CRTC3-210ENST00000560927 RASSF10A6NK89 507 aa16.36■□□□□ 0.21
CRTC3-210ENST00000560927 ADCY7P51828 1080 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms