RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 PABPC4Q13310 644 aaKnown RBP eCLIP8.17□□□□□ -1.1
CTDSPL2-210ENST00000560834 SYDE2Q5VT97 1194 aa8.17□□□□□ -1.1
CTDSPL2-210ENST00000560834 CCDC83Q8IWF9 413 aa8.17□□□□□ -1.1
CTDSPL2-210ENST00000560834 ADGRF4Q8IZF3 695 aa8.17□□□□□ -1.1
CTDSPL2-210ENST00000560834 DNAJC5GQ8N7S2 189 aa8.17□□□□□ -1.1
CTDSPL2-210ENST00000560834 NSUN7Q8NE18 718 aaKnown RBP8.17□□□□□ -1.1
CTDSPL2-210ENST00000560834 KIFC2Q96AC6 838 aa8.17□□□□□ -1.1
CTDSPL2-210ENST00000560834 ZSCAN31Q96LW9 406 aaPredicted RBP8.17□□□□□ -1.1
CTDSPL2-210ENST00000560834 PARK7Q99497 189 aaKnown RBP8.17□□□□□ -1.1
CTDSPL2-210ENST00000560834 SLKQ9H2G2 1235 aaPredicted RBP8.17□□□□□ -1.1
CTDSPL2-210ENST00000560834 RANBP17Q9H2T7 1088 aaKnown RBP8.17□□□□□ -1.1
CTDSPL2-210ENST00000560834 RIOX1Q9H6W3 641 aa8.17□□□□□ -1.1
CTDSPL2-210ENST00000560834 JMJD4Q9H9V9 463 aa8.17□□□□□ -1.1
CTDSPL2-210ENST00000560834 PNMA3Q9UL41 463 aa8.17□□□□□ -1.1
CTDSPL2-210ENST00000560834 ISY1Q9ULR0 285 aaKnown RBP8.17□□□□□ -1.1
CTDSPL2-210ENST00000560834 ADAMTS5Q9UNA0 930 aa8.17□□□□□ -1.1
CTDSPL2-210ENST00000560834 STK36Q9NRP7 1315 aa8.17□□□□□ -1.1
CTDSPL2-210ENST00000560834 GRXCR2A6NFK2 248 aa8.16□□□□□ -1.1
CTDSPL2-210ENST00000560834 SMCHD1A6NHR9 2005 aa8.16□□□□□ -1.1
CTDSPL2-210ENST00000560834 VWA5AO00534 786 aa8.16□□□□□ -1.1
CTDSPL2-210ENST00000560834 ZNF536O15090 1300 aa8.16□□□□□ -1.1
CTDSPL2-210ENST00000560834 JAK2O60674 1132 aa8.16□□□□□ -1.1
CTDSPL2-210ENST00000560834 PEX10O60683 326 aa8.16□□□□□ -1.1
CTDSPL2-210ENST00000560834 PPP1R11O60927 126 aaPredicted RBP8.16□□□□□ -1.1
CTDSPL2-210ENST00000560834 DTNBO60941 627 aa8.16□□□□□ -1.1
CTDSPL2-210ENST00000560834 IFNAR1P17181 557 aa8.16□□□□□ -1.1
CTDSPL2-210ENST00000560834 TAL1P17542 331 aaPredicted RBP8.16□□□□□ -1.1
CTDSPL2-210ENST00000560834 OSBPP22059 807 aa8.16□□□□□ -1.1
CTDSPL2-210ENST00000560834 SMARCA1P28370 1054 aa8.16□□□□□ -1.1
CTDSPL2-210ENST00000560834 GNAQP50148 359 aa8.16□□□□□ -1.1
CTDSPL2-210ENST00000560834 SNAP25P60880 206 aa8.16□□□□□ -1.1
CTDSPL2-210ENST00000560834 PDE4DQ08499 809 aa8.16□□□□□ -1.1
CTDSPL2-210ENST00000560834 IKQ13123 557 aaPredicted RBP8.16□□□□□ -1.1
CTDSPL2-210ENST00000560834 CRHR2Q13324 411 aa8.16□□□□□ -1.1
CTDSPL2-210ENST00000560834 CUL4AQ13619 759 aa8.16□□□□□ -1.1
CTDSPL2-210ENST00000560834 COG2Q14746 738 aa8.16□□□□□ -1.1
CTDSPL2-210ENST00000560834 PPP2R5BQ15173 497 aa8.16□□□□□ -1.1
CTDSPL2-210ENST00000560834 TAF1CQ15572 869 aaPredicted RBP8.16□□□□□ -1.1
CTDSPL2-210ENST00000560834 CDC37Q16543 378 aaPredicted RBP8.16□□□□□ -1.1
CTDSPL2-210ENST00000560834 HSCBQ8IWL3 235 aa8.16□□□□□ -1.1
CTDSPL2-210ENST00000560834 PRPF38AQ8NAV1 312 aaKnown RBP8.16□□□□□ -1.1
CTDSPL2-210ENST00000560834 CHURC1Q8WUH1 139 aa8.16□□□□□ -1.1
CTDSPL2-210ENST00000560834 PHKBQ93100 1093 aa8.16□□□□□ -1.1
CTDSPL2-210ENST00000560834 P2RX7Q99572 595 aaKnown RBP8.16□□□□□ -1.1
CTDSPL2-210ENST00000560834 LZTS2Q9BRK4 669 aa8.16□□□□□ -1.1
CTDSPL2-210ENST00000560834 CFHR5Q9BXR6 569 aa8.16□□□□□ -1.1
CTDSPL2-210ENST00000560834 SLC38A10Q9HBR0 1119 aa8.16□□□□□ -1.1
CTDSPL2-210ENST00000560834 TXNRD2Q9NNW7 524 aa8.16□□□□□ -1.1
CTDSPL2-210ENST00000560834 BTBD7Q9P203 1132 aa8.16□□□□□ -1.1
CTDSPL2-210ENST00000560834 ZNF214Q9UL59 606 aaPredicted RBP8.16□□□□□ -1.1
CTDSPL2-210ENST00000560834 CCDC196A0A1B0GTZ2 297 aa8.15□□□□□ -1.1
CTDSPL2-210ENST00000560834 hCG_1642624A0A1W2PR95 340 aa8.15□□□□□ -1.1
CTDSPL2-210ENST00000560834 PTPDC1A2A3K4 754 aa8.15□□□□□ -1.1
CTDSPL2-210ENST00000560834 CA12O43570 354 aa8.15□□□□□ -1.1
CTDSPL2-210ENST00000560834 PPFIA3O75145 1194 aa8.15□□□□□ -1.1
CTDSPL2-210ENST00000560834 FMNL1O95466 1100 aaPredicted RBP8.15□□□□□ -1.1
CTDSPL2-210ENST00000560834 BCRP11274 1271 aa8.15□□□□□ -1.1
CTDSPL2-210ENST00000560834 TMEM132BQ14DG7 1078 aa8.15□□□□□ -1.1
CTDSPL2-210ENST00000560834 QRICH1Q2TAL8 776 aa8.15□□□□□ -1.1
CTDSPL2-210ENST00000560834 HOMER1Q86YM7 354 aa8.15□□□□□ -1.1
CTDSPL2-210ENST00000560834 CCDC82Q8N4S0 544 aa8.15□□□□□ -1.1
CTDSPL2-210ENST00000560834 SMARCC2Q8TAQ2 1214 aa8.15□□□□□ -1.1
CTDSPL2-210ENST00000560834 GTF3C2Q8WUA4 911 aaPredicted RBP8.15□□□□□ -1.1
CTDSPL2-210ENST00000560834 SHISA4Q96DD7 197 aa8.15□□□□□ -1.1
CTDSPL2-210ENST00000560834 PIGSQ96S52 555 aa8.15□□□□□ -1.1
CTDSPL2-210ENST00000560834 RNF26Q9BY78 433 aaPredicted RBP8.15□□□□□ -1.1
CTDSPL2-210ENST00000560834 KDM4CQ9H3R0 1056 aa8.15□□□□□ -1.1
CTDSPL2-210ENST00000560834 MORF4L1Q9UBU8 362 aa8.15□□□□□ -1.1
CTDSPL2-210ENST00000560834 BAZ2BQ9UIF8 2168 aaKnown RBP8.15□□□□□ -1.11
CTDSPL2-210ENST00000560834 PLXNA1Q9UIW2 1896 aa8.15□□□□□ -1.11
CTDSPL2-210ENST00000560834 MYH15Q9Y2K3 1946 aa8.14□□□□□ -1.11
CTDSPL2-210ENST00000560834 ATP2A1O14983 1001 aa8.14□□□□□ -1.11
CTDSPL2-210ENST00000560834 ZBTB5O15062 677 aa8.14□□□□□ -1.11
CTDSPL2-210ENST00000560834 DHX16O60231 1041 aaKnown RBP8.14□□□□□ -1.11
CTDSPL2-210ENST00000560834 TLR2O60603 784 aa8.14□□□□□ -1.11
CTDSPL2-210ENST00000560834 ALDH1A1P00352 501 aa8.14□□□□□ -1.11
CTDSPL2-210ENST00000560834 ICAM1P05362 532 aa8.14□□□□□ -1.11
CTDSPL2-210ENST00000560834 FDX1P10109 184 aa8.14□□□□□ -1.11
CTDSPL2-210ENST00000560834 FDPSP14324 419 aaKnown RBP8.14□□□□□ -1.11
CTDSPL2-210ENST00000560834 GCLCP48506 637 aaPredicted RBP8.14□□□□□ -1.11
CTDSPL2-210ENST00000560834 OAZ1P54368 228 aa8.14□□□□□ -1.11
CTDSPL2-210ENST00000560834 ERVK-9P63128 1117 aa8.14□□□□□ -1.11
CTDSPL2-210ENST00000560834 ERVK-24P63145 666 aa8.14□□□□□ -1.11
CTDSPL2-210ENST00000560834 PKN1Q16512 942 aa8.14□□□□□ -1.11
CTDSPL2-210ENST00000560834 FAM110CQ1W6H9 321 aa8.14□□□□□ -1.11
CTDSPL2-210ENST00000560834 WWC2Q6AWC2 1192 aa8.14□□□□□ -1.11
CTDSPL2-210ENST00000560834 OTUD7BQ6GQQ9 843 aa8.14□□□□□ -1.11
CTDSPL2-210ENST00000560834 CCDC174Q6PII3 467 aa8.14□□□□□ -1.11
CTDSPL2-210ENST00000560834 MB21D1Q8N884 522 aa8.14□□□□□ -1.11
CTDSPL2-210ENST00000560834 SMCR8Q8TEV9 937 aaPredicted RBP8.14□□□□□ -1.11
CTDSPL2-210ENST00000560834 PIBF1Q8WXW3 757 aa8.14□□□□□ -1.11
CTDSPL2-210ENST00000560834 AIFM3Q96NN9 605 aa8.14□□□□□ -1.11
CTDSPL2-210ENST00000560834 LLPHQ9BRT6 129 aaKnown RBP8.14□□□□□ -1.11
CTDSPL2-210ENST00000560834 PAGR1Q9BTK6 254 aa8.14□□□□□ -1.11
CTDSPL2-210ENST00000560834 SLC26A6Q9BXS9 759 aa8.14□□□□□ -1.11
CTDSPL2-210ENST00000560834 R3HDMLQ9H3Y0 253 aa8.14□□□□□ -1.11
CTDSPL2-210ENST00000560834 RAVER2Q9HCJ3 691 aaKnown RBP8.14□□□□□ -1.11
CTDSPL2-210ENST00000560834 RNF186Q9NXI6 227 aa8.14□□□□□ -1.11
CTDSPL2-210ENST00000560834 SAGE1Q9NXZ1 904 aa8.14□□□□□ -1.11
CTDSPL2-210ENST00000560834 RBPJLQ9UBG7 517 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms