RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 GRIN3BO60391 1043 aa7.64□□□□□ -1.19
TSPAN3-209ENST00000560715 TIPRLO75663 272 aa7.64□□□□□ -1.19
TSPAN3-209ENST00000560715 GIPRP48546 466 aa7.64□□□□□ -1.19
TSPAN3-209ENST00000560715 BCAMP50895 628 aa7.64□□□□□ -1.19
TSPAN3-209ENST00000560715 ODF1Q14990 250 aa7.64□□□□□ -1.19
TSPAN3-209ENST00000560715 LLGL1Q15334 1064 aa7.64□□□□□ -1.19
TSPAN3-209ENST00000560715 TRIP4Q15650 581 aaPredicted RBP7.64□□□□□ -1.19
TSPAN3-209ENST00000560715 TMCO3Q6UWJ1 677 aa7.64□□□□□ -1.19
TSPAN3-209ENST00000560715 WDR63Q8IWG1 891 aa7.64□□□□□ -1.19
TSPAN3-209ENST00000560715 SCUBE3Q8IX30 993 aa7.64□□□□□ -1.19
TSPAN3-209ENST00000560715 PGBD4Q96DM1 585 aa7.64□□□□□ -1.19
TSPAN3-209ENST00000560715 HERPUD2Q9BSE4 406 aa7.64□□□□□ -1.19
TSPAN3-209ENST00000560715 RSRP1Q9BUV0 290 aa7.64□□□□□ -1.19
TSPAN3-209ENST00000560715 CDK19Q9BWU1 502 aa7.64□□□□□ -1.19
TSPAN3-209ENST00000560715 ZBTB40Q9NUA8 1239 aa7.64□□□□□ -1.19
TSPAN3-209ENST00000560715 ARGLU1Q9NWB6 273 aaPredicted RBP7.64□□□□□ -1.19
TSPAN3-209ENST00000560715 ELP1O95163 1332 aa7.63□□□□□ -1.19
TSPAN3-209ENST00000560715 SYNDIG1LA6NDD5 238 aa7.63□□□□□ -1.19
TSPAN3-209ENST00000560715 GREM1O60565 184 aa7.63□□□□□ -1.19
TSPAN3-209ENST00000560715 INHAP05111 366 aa7.63□□□□□ -1.19
TSPAN3-209ENST00000560715 CHKAP35790 457 aa7.63□□□□□ -1.19
TSPAN3-209ENST00000560715 SSR1P43307 286 aaKnown RBP7.63□□□□□ -1.19
TSPAN3-209ENST00000560715 CORO7P57737 925 aa7.63□□□□□ -1.19
TSPAN3-209ENST00000560715 ADCY1Q08828 1119 aa7.63□□□□□ -1.19
TSPAN3-209ENST00000560715 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.63□□□□□ -1.19
TSPAN3-209ENST00000560715 ITPRIPQ8IWB1 547 aa7.63□□□□□ -1.19
TSPAN3-209ENST00000560715 IFNL2Q8IZJ0 200 aa7.63□□□□□ -1.19
TSPAN3-209ENST00000560715 NSUN6Q8TEA1 469 aaKnown RBP7.63□□□□□ -1.19
TSPAN3-209ENST00000560715 ATRIPQ8WXE1 791 aa7.63□□□□□ -1.19
TSPAN3-209ENST00000560715 ZSCAN16Q9H4T2 348 aaPredicted RBP7.63□□□□□ -1.19
TSPAN3-209ENST00000560715 LUC7LQ9NQ29 371 aaKnown RBP7.63□□□□□ -1.19
TSPAN3-209ENST00000560715 BCS1LQ9Y276 419 aa7.63□□□□□ -1.19
TSPAN3-209ENST00000560715 OAS2P29728 719 aaKnown RBP7.63□□□□□ -1.19
TSPAN3-209ENST00000560715 STT3AP46977 705 aa7.63□□□□□ -1.19
TSPAN3-209ENST00000560715 NRLP54845 237 aa7.63□□□□□ -1.19
TSPAN3-209ENST00000560715 ZKSCAN8Q15776 578 aaPredicted RBP7.63□□□□□ -1.19
TSPAN3-209ENST00000560715 ZYXQ15942 572 aaKnown RBP7.63□□□□□ -1.19
TSPAN3-209ENST00000560715 ERCC6LQ2NKX8 1250 aa7.63□□□□□ -1.19
TSPAN3-209ENST00000560715 TMEM67Q5HYA8 995 aa7.63□□□□□ -1.19
TSPAN3-209ENST00000560715 BRICD5Q6PL45 260 aa7.63□□□□□ -1.19
TSPAN3-209ENST00000560715 ZSWIM2Q8NEG5 633 aa7.63□□□□□ -1.19
TSPAN3-209ENST00000560715 TBC1D22AQ8WUA7 517 aa7.63□□□□□ -1.19
TSPAN3-209ENST00000560715 CCDC34Q96HJ3 373 aa7.63□□□□□ -1.19
TSPAN3-209ENST00000560715 SEZ6LQ9BYH1 1024 aa7.63□□□□□ -1.19
TSPAN3-209ENST00000560715 SMOC1Q9H4F8 434 aa7.63□□□□□ -1.19
TSPAN3-209ENST00000560715 CDC23Q9UJX2 597 aa7.63□□□□□ -1.19
TSPAN3-209ENST00000560715 TECPR2O15040 1411 aa7.63□□□□□ -1.19
TSPAN3-209ENST00000560715 FAM135BQ49AJ0 1406 aa7.63□□□□□ -1.19
TSPAN3-209ENST00000560715 RIMS1Q86UR5 1692 aaKnown RBP7.63□□□□□ -1.19
TSPAN3-209ENST00000560715 ATP7BP35670 1465 aa7.62□□□□□ -1.19
TSPAN3-209ENST00000560715 AATKQ6ZMQ8 1374 aa7.62□□□□□ -1.19
TSPAN3-209ENST00000560715 KLHL33A6NCF5 533 aa7.62□□□□□ -1.19
TSPAN3-209ENST00000560715 GPR39O43194 453 aa7.62□□□□□ -1.19
TSPAN3-209ENST00000560715 PAGE1O75459 146 aa7.62□□□□□ -1.19
TSPAN3-209ENST00000560715 RPS6KA5O75582 802 aa7.62□□□□□ -1.19
TSPAN3-209ENST00000560715 MTHFSP49914 203 aa7.62□□□□□ -1.19
TSPAN3-209ENST00000560715 NEK4P51957 841 aa7.62□□□□□ -1.19
TSPAN3-209ENST00000560715 PNMA8AQ86V59 439 aaPredicted RBP7.62□□□□□ -1.19
TSPAN3-209ENST00000560715 CCT6BQ92526 530 aa7.62□□□□□ -1.19
TSPAN3-209ENST00000560715 BAP1Q92560 729 aa7.62□□□□□ -1.19
TSPAN3-209ENST00000560715 NAA15Q9BXJ9 866 aaKnown RBP7.62□□□□□ -1.19
TSPAN3-209ENST00000560715 OSBPL5Q9H0X9 879 aaPredicted RBP7.62□□□□□ -1.19
TSPAN3-209ENST00000560715 L2HGDHQ9H9P8 463 aa7.62□□□□□ -1.19
TSPAN3-209ENST00000560715 CHMP3Q9Y3E7 222 aa7.62□□□□□ -1.19
TSPAN3-209ENST00000560715 CPS1P31327 1500 aa7.62□□□□□ -1.19
TSPAN3-209ENST00000560715 TMEM2Q9UHN6 1383 aa7.62□□□□□ -1.19
TSPAN3-209ENST00000560715 C3P01024 1663 aa7.62□□□□□ -1.19
TSPAN3-209ENST00000560715 TTC36A6NLP5 189 aa7.62□□□□□ -1.19
TSPAN3-209ENST00000560715 ERVH48-1M5A8F1 160 aa7.62□□□□□ -1.19
TSPAN3-209ENST00000560715 ASGR2P07307 311 aa7.62□□□□□ -1.19
TSPAN3-209ENST00000560715 HTR3AP46098 478 aa7.62□□□□□ -1.19
TSPAN3-209ENST00000560715 CLCQ05315 142 aa7.62□□□□□ -1.19
TSPAN3-209ENST00000560715 HYIQ5T013 277 aa7.62□□□□□ -1.19
TSPAN3-209ENST00000560715 ZCCHC8Q6NZY4 707 aaKnown RBP7.62□□□□□ -1.19
TSPAN3-209ENST00000560715 LEKR1Q6ZMV7 388 aa7.62□□□□□ -1.19
TSPAN3-209ENST00000560715 OTOP3Q7RTS5 596 aa7.62□□□□□ -1.19
TSPAN3-209ENST00000560715 PIP4P2Q8N4L2 257 aa7.62□□□□□ -1.19
TSPAN3-209ENST00000560715 CLIP3Q96DZ5 547 aa7.62□□□□□ -1.19
TSPAN3-209ENST00000560715 GFPT2O94808 682 aa7.61□□□□□ -1.19
TSPAN3-209ENST00000560715 TFE3P19532 575 aaPredicted RBP7.61□□□□□ -1.19
TSPAN3-209ENST00000560715 LMAN1P49257 510 aa7.61□□□□□ -1.19
TSPAN3-209ENST00000560715 UBE2HP62256 183 aa7.61□□□□□ -1.19
TSPAN3-209ENST00000560715 NEXNQ0ZGT2 675 aa7.61□□□□□ -1.19
TSPAN3-209ENST00000560715 ZNF267Q14586 743 aaPredicted RBP7.61□□□□□ -1.19
TSPAN3-209ENST00000560715 LDHAL6AQ6ZMR3 332 aa7.61□□□□□ -1.19
TSPAN3-209ENST00000560715 FAM47EQ6ZV65 393 aa7.61□□□□□ -1.19
TSPAN3-209ENST00000560715 FAM178BQ8IXR5 827 aa7.61□□□□□ -1.19
TSPAN3-209ENST00000560715 CACTINQ8WUQ7 758 aaKnown RBP7.61□□□□□ -1.19
TSPAN3-209ENST00000560715 IPCEF1Q8WWN9 437 aaPredicted RBP7.61□□□□□ -1.19
TSPAN3-209ENST00000560715 GCC1Q96CN9 775 aa7.61□□□□□ -1.19
TSPAN3-209ENST00000560715 TACO1Q9BSH4 297 aaKnown RBP7.61□□□□□ -1.19
TSPAN3-209ENST00000560715 ZCCHC17Q9NP64 241 aaKnown RBP7.61□□□□□ -1.19
TSPAN3-209ENST00000560715 CRTAC1Q9NQ79 661 aa7.61□□□□□ -1.19
TSPAN3-209ENST00000560715 FER1L4A9Z1Z3 1794 aa7.61□□□□□ -1.19
TSPAN3-209ENST00000560715 IQSEC2Q5JU85 1478 aa7.61□□□□□ -1.19
TSPAN3-209ENST00000560715 IL33O95760 270 aa7.61□□□□□ -1.19
TSPAN3-209ENST00000560715 IFIT1P09914 478 aaKnown RBP7.61□□□□□ -1.19
TSPAN3-209ENST00000560715 ZNF157P51786 506 aaPredicted RBP7.61□□□□□ -1.19
TSPAN3-209ENST00000560715 CUL4AQ13619 759 aa7.61□□□□□ -1.19
TSPAN3-209ENST00000560715 SMC1AQ14683 1233 aaKnown RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms