RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 USP17L24Q0WX57 530 aa9.84□□□□□ -0.83
TRAF3-209ENST00000560463 COG2Q14746 738 aa9.84□□□□□ -0.83
TRAF3-209ENST00000560463 NONOQ15233 471 aaKnown RBP eCLIP9.84□□□□□ -0.833e-6■■■■□ 20.4
TRAF3-209ENST00000560463 SF3A1Q15459 793 aaKnown RBP9.84□□□□□ -0.83
TRAF3-209ENST00000560463 ADALQ6DHV7 355 aa9.84□□□□□ -0.83
TRAF3-209ENST00000560463 CHADLQ6NUI6 762 aa9.84□□□□□ -0.83
TRAF3-209ENST00000560463 CATSPERGQ6ZRH7 1159 aa9.84□□□□□ -0.83
TRAF3-209ENST00000560463 PIK3AP1Q6ZUJ8 805 aa9.84□□□□□ -0.83
TRAF3-209ENST00000560463 PRRT2Q7Z6L0 340 aaPredicted RBP9.84□□□□□ -0.83
TRAF3-209ENST00000560463 C2orf69Q8N8R5 385 aa9.84□□□□□ -0.83
TRAF3-209ENST00000560463 SLC10A4Q96EP9 437 aa9.84□□□□□ -0.83
TRAF3-209ENST00000560463 MAF1Q9H063 256 aa9.84□□□□□ -0.83
TRAF3-209ENST00000560463 SLC38A10Q9HBR0 1119 aa9.84□□□□□ -0.83
TRAF3-209ENST00000560463 NMRK2Q9NPI5 230 aa9.84□□□□□ -0.83
TRAF3-209ENST00000560463 HOXC10Q9NYD6 342 aa9.84□□□□□ -0.83
TRAF3-209ENST00000560463 MRPL11Q9Y3B7 192 aaKnown RBP9.84□□□□□ -0.83
TRAF3-209ENST00000560463 CLIC4Q9Y696 253 aa9.84□□□□□ -0.83
TRAF3-209ENST00000560463 DOCK5Q9H7D0 1870 aa9.84□□□□□ -0.83
TRAF3-209ENST00000560463 MCM3APO60318 1980 aa9.84□□□□□ -0.83
TRAF3-209ENST00000560463 PIK3CDO00329 1044 aa9.83□□□□□ -0.84
TRAF3-209ENST00000560463 LAD1O00515 517 aa9.83□□□□□ -0.84
TRAF3-209ENST00000560463 HOXA7P31268 230 aaPredicted RBP9.83□□□□□ -0.84
TRAF3-209ENST00000560463 DSG3P32926 999 aa9.83□□□□□ -0.84
TRAF3-209ENST00000560463 OAZ1P54368 228 aa9.83□□□□□ -0.84
TRAF3-209ENST00000560463 PABPC4Q13310 644 aaKnown RBP eCLIP9.83□□□□□ -0.84
TRAF3-209ENST00000560463 AP3B2Q13367 1082 aa9.83□□□□□ -0.84
TRAF3-209ENST00000560463 PTPAQ15257 358 aa9.83□□□□□ -0.84
TRAF3-209ENST00000560463 EARS2Q5JPH6 523 aaKnown RBP9.83□□□□□ -0.84
TRAF3-209ENST00000560463 TTC38Q5R3I4 469 aa9.83□□□□□ -0.84
TRAF3-209ENST00000560463 FASTKD5Q7L8L6 764 aaKnown RBP9.83□□□□□ -0.84
TRAF3-209ENST00000560463 SYAP1Q96A49 352 aaPredicted RBP9.83□□□□□ -0.84
TRAF3-209ENST00000560463 OPTNQ96CV9 577 aa9.83□□□□□ -0.84
TRAF3-209ENST00000560463 CLMNQ96JQ2 1002 aa9.83□□□□□ -0.84
TRAF3-209ENST00000560463 NAP1L4Q99733 375 aaKnown RBP9.83□□□□□ -0.84
TRAF3-209ENST00000560463 GBA2Q9HCG7 927 aaPredicted RBP9.83□□□□□ -0.84
TRAF3-209ENST00000560463 FBXO28Q9NVF7 368 aa9.83□□□□□ -0.84
TRAF3-209ENST00000560463 MAP3K20Q9NYL2 800 aaKnown RBP9.83□□□□□ -0.84
TRAF3-209ENST00000560463 BIN2Q9UBW5 565 aaPredicted RBP9.83□□□□□ -0.84
TRAF3-209ENST00000560463 ADAMTS5Q9UNA0 930 aa9.83□□□□□ -0.84
TRAF3-209ENST00000560463 CTDP1Q9Y5B0 961 aaPredicted RBP9.83□□□□□ -0.84
TRAF3-209ENST00000560463 DOCK3Q8IZD9 2030 aa9.83□□□□□ -0.84
TRAF3-209ENST00000560463 A0A1W2PQ27 194 aa9.82□□□□□ -0.84
TRAF3-209ENST00000560463 A0A1W2PQ64 194 aa9.82□□□□□ -0.84
TRAF3-209ENST00000560463 A0A1W2PQD8 194 aa9.82□□□□□ -0.84
TRAF3-209ENST00000560463 TRAF5O00463 557 aa9.82□□□□□ -0.84
TRAF3-209ENST00000560463 IRF6O14896 467 aa9.82□□□□□ -0.84
TRAF3-209ENST00000560463 ATP2A1O14983 1001 aa9.82□□□□□ -0.84
TRAF3-209ENST00000560463 CUTAO60888 179 aa9.82□□□□□ -0.84
TRAF3-209ENST00000560463 GADD45BO75293 160 aaPredicted RBP9.82□□□□□ -0.84
TRAF3-209ENST00000560463 ITGBL1O95965 494 aaPredicted RBP9.82□□□□□ -0.84
TRAF3-209ENST00000560463 ME1P48163 572 aa9.82□□□□□ -0.84
TRAF3-209ENST00000560463 USH1GQ495M9 461 aa9.82□□□□□ -0.84
TRAF3-209ENST00000560463 MOB2Q70IA6 237 aa9.82□□□□□ -0.84
TRAF3-209ENST00000560463 NEK8Q86SG6 692 aa9.82□□□□□ -0.84
TRAF3-209ENST00000560463 MCF2L2Q86YR7 1114 aa9.82□□□□□ -0.84
TRAF3-209ENST00000560463 GPT2Q8TD30 523 aa9.82□□□□□ -0.84
TRAF3-209ENST00000560463 CNKSR2Q8WXI2 1034 aa9.82□□□□□ -0.84
TRAF3-209ENST00000560463 OTUD5Q96G74 571 aa9.82□□□□□ -0.84
TRAF3-209ENST00000560463 FTOQ9C0B1 505 aaKnown RBP eCLIP9.82□□□□□ -0.84
TRAF3-209ENST00000560463 ZNF408Q9H9D4 720 aa9.82□□□□□ -0.84
TRAF3-209ENST00000560463 PCDHA7Q9UN72 937 aa9.82□□□□□ -0.84
TRAF3-209ENST00000560463 PCDHB6Q9Y5E3 794 aa9.82□□□□□ -0.84
TRAF3-209ENST00000560463 ZNF536O15090 1300 aa9.82□□□□□ -0.84
TRAF3-209ENST00000560463 FAM205CA6NFA0 338 aa9.81□□□□□ -0.84
TRAF3-209ENST00000560463 SPDYE3A6NKU9 549 aa9.81□□□□□ -0.84
TRAF3-209ENST00000560463 VWA5AO00534 786 aa9.81□□□□□ -0.84
TRAF3-209ENST00000560463 MEIS2O14770 477 aa9.81□□□□□ -0.84
TRAF3-209ENST00000560463 ADAMTS3O15072 1205 aa9.81□□□□□ -0.84
TRAF3-209ENST00000560463 CELF2O95319 508 aaKnown RBP9.81□□□□□ -0.84
TRAF3-209ENST00000560463 ZBTB48P10074 688 aaPredicted RBP9.81□□□□□ -0.84
TRAF3-209ENST00000560463 USP11P51784 963 aa9.81□□□□□ -0.84
TRAF3-209ENST00000560463 SNAP25P60880 206 aa9.81□□□□□ -0.84
TRAF3-209ENST00000560463 ATP2C1P98194 919 aaPredicted RBP9.81□□□□□ -0.84
TRAF3-209ENST00000560463 GHRHRQ02643 423 aa9.81□□□□□ -0.84
TRAF3-209ENST00000560463 SNAPC2Q13487 334 aa9.81□□□□□ -0.84
TRAF3-209ENST00000560463 DGKZQ13574 1117 aa9.81□□□□□ -0.84
TRAF3-209ENST00000560463 INF2Q27J81 1249 aa9.81□□□□□ -0.84
TRAF3-209ENST00000560463 JAKMIP3Q5VZ66 844 aa9.81□□□□□ -0.84
TRAF3-209ENST00000560463 ARL6IP4Q66PJ3 421 aaKnown RBP9.81□□□□□ -0.84
TRAF3-209ENST00000560463 CCDC174Q6PII3 467 aa9.81□□□□□ -0.84
TRAF3-209ENST00000560463 LBX2Q6XYB7 198 aa9.81□□□□□ -0.84
TRAF3-209ENST00000560463 GADL1Q6ZQY3 521 aa9.81□□□□□ -0.84
TRAF3-209ENST00000560463 MB21D1Q8N884 522 aa9.81□□□□□ -0.84
TRAF3-209ENST00000560463 KRI1Q8N9T8 703 aaKnown RBP9.81□□□□□ -0.84
TRAF3-209ENST00000560463 ZNF579Q8NAF0 562 aaKnown RBP9.81□□□□□ -0.84
TRAF3-209ENST00000560463 RASGRP4Q8TDF6 673 aa9.81□□□□□ -0.84
TRAF3-209ENST00000560463 TBCKQ8TEA7 893 aa9.81□□□□□ -0.84
TRAF3-209ENST00000560463 ZNF526Q8TF50 670 aaPredicted RBP9.81□□□□□ -0.84
TRAF3-209ENST00000560463 FERMT2Q96AC1 680 aa9.81□□□□□ -0.84
TRAF3-209ENST00000560463 PGBD1Q96JS3 809 aa9.81□□□□□ -0.84
TRAF3-209ENST00000560463 EHMT1Q9H9B1 1298 aa9.81□□□□□ -0.84
TRAF3-209ENST00000560463 CCPG1Q9ULG6 757 aa9.81□□□□□ -0.84
TRAF3-209ENST00000560463 AGTPBP1Q9UPW5 1226 aa9.81□□□□□ -0.84
TRAF3-209ENST00000560463 SRPRBQ9Y5M8 271 aaKnown RBP9.81□□□□□ -0.84
TRAF3-209ENST00000560463 LRRC37A2A6NM11 1700 aa9.8□□□□□ -0.84
TRAF3-209ENST00000560463 GCFC2P16383 781 aaKnown RBP9.8□□□□□ -0.84
TRAF3-209ENST00000560463 ATP2B1P20020 1258 aa9.8□□□□□ -0.84
TRAF3-209ENST00000560463 PTPREP23469 700 aa9.8□□□□□ -0.84
TRAF3-209ENST00000560463 CMA1P23946 247 aa9.8□□□□□ -0.84
TRAF3-209ENST00000560463 PRPHP41219 470 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms