RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 HNRNPDLO14979 420 aaKnown RBP14.8□□□□□ -0.04
TRAF3-208ENST00000560371 MAIP1Q8WWC4 291 aa14.8□□□□□ -0.04
TRAF3-208ENST00000560371 PNMA3Q9UL41 463 aa14.8□□□□□ -0.04
TRAF3-208ENST00000560371 ZMYM1Q5SVZ6 1142 aa14.8□□□□□ -0.04
TRAF3-208ENST00000560371 SPHKAPQ2M3C7 1700 aa14.79□□□□□ -0.04
TRAF3-208ENST00000560371 C21orf2O43822 256 aa14.79□□□□□ -0.04
TRAF3-208ENST00000560371 PFKFB1P16118 471 aa14.79□□□□□ -0.04
TRAF3-208ENST00000560371 TAOK1Q7L7X3 1001 aa14.79□□□□□ -0.04
TRAF3-208ENST00000560371 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.79□□□□□ -0.04
TRAF3-208ENST00000560371 TPCN1Q9ULQ1 816 aa14.79□□□□□ -0.04
TRAF3-208ENST00000560371 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.79□□□□□ -0.04
TRAF3-208ENST00000560371 GOLGA4Q13439 2230 aaKnown RBP14.79□□□□□ -0.04
TRAF3-208ENST00000560371 ERCC6LQ2NKX8 1250 aa14.79□□□□□ -0.04
TRAF3-208ENST00000560371 METTL14Q9HCE5 456 aaKnown RBP14.79□□□□□ -0.04
TRAF3-208ENST00000560371 AMFRQ9UKV5 643 aa14.79□□□□□ -0.04
TRAF3-208ENST00000560371 GSPT1P15170 499 aaKnown RBP14.79□□□□□ -0.04
TRAF3-208ENST00000560371 LONP1P36776 959 aaKnown RBP14.79□□□□□ -0.04
TRAF3-208ENST00000560371 TPD52P55327 224 aaPredicted RBP14.79□□□□□ -0.04
TRAF3-208ENST00000560371 FAM76AQ8TAV0 307 aa14.79□□□□□ -0.04
TRAF3-208ENST00000560371 ATP2A3Q93084 1043 aa14.79□□□□□ -0.04
TRAF3-208ENST00000560371 HPDP32754 393 aaPredicted RBP14.79□□□□□ -0.04
TRAF3-208ENST00000560371 ADD2P35612 726 aa14.79□□□□□ -0.04
TRAF3-208ENST00000560371 RNASELQ05823 741 aaKnown RBP14.79□□□□□ -0.04
TRAF3-208ENST00000560371 GRAPQ13588 217 aa14.79□□□□□ -0.04
TRAF3-208ENST00000560371 GRAPLQ8TC17 118 aaPredicted RBP14.79□□□□□ -0.04
TRAF3-208ENST00000560371 PLEKHF1Q96S99 279 aa14.79□□□□□ -0.04
TRAF3-208ENST00000560371 MKRN1Q9UHC7 482 aaKnown RBP14.79□□□□□ -0.04
TRAF3-208ENST00000560371 TSKSQ9UJT2 592 aa14.79□□□□□ -0.04
TRAF3-208ENST00000560371 KCNJ18B7U540 433 aa14.79□□□□□ -0.04
TRAF3-208ENST00000560371 POLR2BP30876 1174 aaKnown RBP14.79□□□□□ -0.04
TRAF3-208ENST00000560371 KIF11P52732 1056 aa14.79□□□□□ -0.04
TRAF3-208ENST00000560371 KCNJ12Q14500 433 aa14.79□□□□□ -0.04
TRAF3-208ENST00000560371 COA1Q9GZY4 146 aa14.79□□□□□ -0.04
TRAF3-208ENST00000560371 DISC1Q9NRI5 854 aa14.79□□□□□ -0.04
TRAF3-208ENST00000560371 GADD45BO75293 160 aaPredicted RBP14.79□□□□□ -0.04
TRAF3-208ENST00000560371 MORC3Q14149 939 aa14.79□□□□□ -0.04
TRAF3-208ENST00000560371 AOC3Q16853 763 aa14.79□□□□□ -0.04
TRAF3-208ENST00000560371 BRINP3Q76B58 766 aa14.79□□□□□ -0.04
TRAF3-208ENST00000560371 HAUS1Q96CS2 278 aa14.79□□□□□ -0.04
TRAF3-208ENST00000560371 SLF1Q9BQI6 1058 aa14.79□□□□□ -0.04
TRAF3-208ENST00000560371 MKRN3Q13064 507 aaKnown RBP14.78□□□□□ -0.04
TRAF3-208ENST00000560371 PIK3CAP42336 1068 aa14.78□□□□□ -0.04
TRAF3-208ENST00000560371 ZNF75DP51815 510 aa14.78□□□□□ -0.04
TRAF3-208ENST00000560371 HADHQ16836 314 aaKnown RBP14.78□□□□□ -0.04
TRAF3-208ENST00000560371 RNF26Q9BY78 433 aaPredicted RBP14.78□□□□□ -0.04
TRAF3-208ENST00000560371 SLC39A2Q9NP94 309 aa14.78□□□□□ -0.04
TRAF3-208ENST00000560371 PRAMEF22A3QJZ6 481 aa14.78□□□□□ -0.04
TRAF3-208ENST00000560371 SPDYE16A6NNV3 312 aaPredicted RBP14.78□□□□□ -0.04
TRAF3-208ENST00000560371 MYCP01106 439 aaPredicted RBP14.78□□□□□ -0.04
TRAF3-208ENST00000560371 IFNB1P01574 187 aa14.78□□□□□ -0.04
TRAF3-208ENST00000560371 PDIA3P30101 505 aaKnown RBP14.78□□□□□ -0.04
TRAF3-208ENST00000560371 SARNPP82979 210 aaKnown RBP14.78□□□□□ -0.04
TRAF3-208ENST00000560371 SPDYE2Q495Y8 402 aa14.78□□□□□ -0.04
TRAF3-208ENST00000560371 KIAA1841Q6NSI8 718 aa14.78□□□□□ -0.04
TRAF3-208ENST00000560371 OR8K1Q8NGG5 319 aa14.78□□□□□ -0.04
TRAF3-208ENST00000560371 USP28Q96RU2 1077 aa14.78□□□□□ -0.04
TRAF3-208ENST00000560371 PDE6CP51160 858 aa14.78□□□□□ -0.04
TRAF3-208ENST00000560371 MIS18BP1Q6P0N0 1132 aa14.78□□□□□ -0.04
TRAF3-208ENST00000560371 GJA10Q969M2 543 aa14.78□□□□□ -0.04
TRAF3-208ENST00000560371 USP17L8P0C7I0 530 aa14.78□□□□□ -0.04
TRAF3-208ENST00000560371 LONRF3Q496Y0 759 aa14.78□□□□□ -0.04
TRAF3-208ENST00000560371 INTS8Q75QN2 995 aaKnown RBP14.78□□□□□ -0.04
TRAF3-208ENST00000560371 SLC17A8Q8NDX2 589 aa14.78□□□□□ -0.04
TRAF3-208ENST00000560371 MNAT1P51948 309 aa14.78□□□□□ -0.04
TRAF3-208ENST00000560371 U2AF1L4Q8WU68 220 aaKnown RBP14.78□□□□□ -0.04
TRAF3-208ENST00000560371 MBD5Q9P267 1494 aa14.77□□□□□ -0.04
TRAF3-208ENST00000560371 FAM170AA1A519 330 aa14.77□□□□□ -0.04
TRAF3-208ENST00000560371 LAD1O00515 517 aa14.77□□□□□ -0.04
TRAF3-208ENST00000560371 TBC1D8O95759 1140 aa14.77□□□□□ -0.04
TRAF3-208ENST00000560371 UBXN2AP68543 259 aa14.77□□□□□ -0.04
TRAF3-208ENST00000560371 ADAM9Q13443 819 aa14.77□□□□□ -0.04
TRAF3-208ENST00000560371 WDR11Q9BZH6 1224 aa14.77□□□□□ -0.04
TRAF3-208ENST00000560371 STAM2O75886 525 aa14.77□□□□□ -0.04
TRAF3-208ENST00000560371 ASNSP08243 561 aa14.77□□□□□ -0.04
TRAF3-208ENST00000560371 FAM26FQ5R3K3 315 aa14.77□□□□□ -0.04
TRAF3-208ENST00000560371 FBXO18Q8NFZ0 1043 aa14.77□□□□□ -0.04
TRAF3-208ENST00000560371 LRFN2Q9ULH4 789 aa14.77□□□□□ -0.04
TRAF3-208ENST00000560371 CCND2P30279 289 aa14.77□□□□□ -0.05
TRAF3-208ENST00000560371 CCDC94Q9BW85 323 aaPredicted RBP14.77□□□□□ -0.05
TRAF3-208ENST00000560371 SPATA31A3Q5VYP0 1347 aa14.77□□□□□ -0.05
TRAF3-208ENST00000560371 RNF8O76064 485 aa14.77□□□□□ -0.05
TRAF3-208ENST00000560371 SLC16A2P36021 539 aa14.77□□□□□ -0.05
TRAF3-208ENST00000560371 GPATCH11Q8N954 259 aa14.77□□□□□ -0.05
TRAF3-208ENST00000560371 BSDC1Q9NW68 430 aaPredicted RBP14.77□□□□□ -0.05
TRAF3-208ENST00000560371 ZNF215Q9UL58 517 aaPredicted RBP14.77□□□□□ -0.05
TRAF3-208ENST00000560371 RPN1P04843 607 aaKnown RBP14.77□□□□□ -0.05
TRAF3-208ENST00000560371 CUL4BQ13620 913 aa14.77□□□□□ -0.05
TRAF3-208ENST00000560371 KLHL7Q8IXQ5 586 aa14.77□□□□□ -0.05
TRAF3-208ENST00000560371 PLCB4Q15147 1175 aa14.76□□□□□ -0.05
TRAF3-208ENST00000560371 RBSNQ9H1K0 784 aa14.76□□□□□ -0.05
TRAF3-208ENST00000560371 AFF2P51816 1311 aa14.76□□□□□ -0.05
TRAF3-208ENST00000560371 PDZD4Q76G19 769 aaPredicted RBP14.76□□□□□ -0.05
TRAF3-208ENST00000560371 EEPD1Q7L9B9 569 aa14.76□□□□□ -0.05
TRAF3-208ENST00000560371 BAZ2BQ9UIF8 2168 aaKnown RBP14.76□□□□□ -0.05
TRAF3-208ENST00000560371 RIOK3O14730 519 aaKnown RBP14.76□□□□□ -0.05
TRAF3-208ENST00000560371 ZSCAN20P17040 1043 aaPredicted RBP14.76□□□□□ -0.05
TRAF3-208ENST00000560371 FYB2Q5VWT5 728 aa14.76□□□□□ -0.05
TRAF3-208ENST00000560371 SCRN1Q12765 414 aa14.76□□□□□ -0.05
TRAF3-208ENST00000560371 MUM1L1Q5H9M0 696 aa14.76□□□□□ -0.05
TRAF3-208ENST00000560371 ADCY10Q96PN6 1610 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms