RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 PARP4Q9UKK3 1724 aaKnown RBP6.79□□□□□ -1.32
SNRPA1-209ENST00000560307 ANKARQ7Z5J8 1434 aa6.78□□□□□ -1.32
SNRPA1-209ENST00000560307 AGLP35573 1532 aa6.78□□□□□ -1.32
SNRPA1-209ENST00000560307 CCDC196A0A1B0GTZ2 297 aa6.78□□□□□ -1.32
SNRPA1-209ENST00000560307 VWA3AA6NCI4 1184 aa6.78□□□□□ -1.32
SNRPA1-209ENST00000560307 EIF3CLB5ME19 914 aaKnown RBP6.78□□□□□ -1.32
SNRPA1-209ENST00000560307 PFKFB2O60825 505 aa6.78□□□□□ -1.32
SNRPA1-209ENST00000560307 PPFIA4O75335 1185 aa6.78□□□□□ -1.32
SNRPA1-209ENST00000560307 SEC31AO94979 1220 aaKnown RBP6.78□□□□□ -1.32
SNRPA1-209ENST00000560307 CTSHP09668 335 aa6.78□□□□□ -1.32
SNRPA1-209ENST00000560307 CPA1P15085 419 aa6.78□□□□□ -1.32
SNRPA1-209ENST00000560307 TATP17735 454 aaPredicted RBP6.78□□□□□ -1.32
SNRPA1-209ENST00000560307 MCM3P25205 808 aa6.78□□□□□ -1.32
SNRPA1-209ENST00000560307 IDH3AP50213 366 aa6.78□□□□□ -1.32
SNRPA1-209ENST00000560307 IDI1Q13907 227 aa6.78□□□□□ -1.32
SNRPA1-209ENST00000560307 SAFB2Q14151 953 aaKnown RBP eCLIP6.78□□□□□ -1.32
SNRPA1-209ENST00000560307 C4orf17Q53FE4 359 aa6.78□□□□□ -1.32
SNRPA1-209ENST00000560307 NUTM2GQ5VZR2 741 aa6.78□□□□□ -1.32
SNRPA1-209ENST00000560307 PI16Q6UXB8 463 aa6.78□□□□□ -1.32
SNRPA1-209ENST00000560307 MCM10Q7L590 875 aa6.78□□□□□ -1.32
SNRPA1-209ENST00000560307 ZNF438Q7Z4V0 828 aa6.78□□□□□ -1.32
SNRPA1-209ENST00000560307 SRGAP1Q7Z6B7 1085 aa6.78□□□□□ -1.32
SNRPA1-209ENST00000560307 NME9Q86XW9 330 aa6.78□□□□□ -1.32
SNRPA1-209ENST00000560307 VSTM4Q8IW00 320 aa6.78□□□□□ -1.32
SNRPA1-209ENST00000560307 KCNG4Q8TDN1 519 aa6.78□□□□□ -1.32
SNRPA1-209ENST00000560307 SUSD3Q96L08 255 aa6.78□□□□□ -1.32
SNRPA1-209ENST00000560307 EIF3CQ99613 913 aaKnown RBP6.78□□□□□ -1.32
SNRPA1-209ENST00000560307 PARD6BQ9BYG5 372 aa6.78□□□□□ -1.32
SNRPA1-209ENST00000560307 GOLPH3LQ9H4A5 285 aa6.78□□□□□ -1.32
SNRPA1-209ENST00000560307 A1CFQ9NQ94 594 aaKnown RBP6.78□□□□□ -1.32
SNRPA1-209ENST00000560307 IFNKQ9P0W0 207 aa6.78□□□□□ -1.32
SNRPA1-209ENST00000560307 STK26Q9P289 416 aa6.78□□□□□ -1.32
SNRPA1-209ENST00000560307 LCMT1Q9UIC8 334 aa6.78□□□□□ -1.32
SNRPA1-209ENST00000560307 GGT7Q9UJ14 662 aa6.78□□□□□ -1.32
SNRPA1-209ENST00000560307 LMTK3Q96Q04 1460 aa6.78□□□□□ -1.32
SNRPA1-209ENST00000560307 LMO7Q8WWI1 1683 aa6.77□□□□□ -1.32
SNRPA1-209ENST00000560307 IGSF1Q8N6C5 1336 aa6.77□□□□□ -1.32
SNRPA1-209ENST00000560307 SALL1Q9NSC2 1324 aa6.77□□□□□ -1.32
SNRPA1-209ENST00000560307 KDM6AO15550 1401 aaPredicted RBP6.77□□□□□ -1.33
SNRPA1-209ENST00000560307 FAM237AA0A1B0GTK4 181 aa6.77□□□□□ -1.33
SNRPA1-209ENST00000560307 A6NNZ2 444 aa6.77□□□□□ -1.33
SNRPA1-209ENST00000560307 H3BQF6 201 aa6.77□□□□□ -1.33
SNRPA1-209ENST00000560307 TGFBR3LH3BV60 316 aa6.77□□□□□ -1.33
SNRPA1-209ENST00000560307 AARSP49588 968 aaKnown RBP eCLIP6.77□□□□□ -1.33
SNRPA1-209ENST00000560307 MYL5Q02045 173 aa6.77□□□□□ -1.33
SNRPA1-209ENST00000560307 TRDNQ13061 729 aa6.77□□□□□ -1.33
SNRPA1-209ENST00000560307 TBX2Q13207 712 aaPredicted RBP6.77□□□□□ -1.33
SNRPA1-209ENST00000560307 NCAPHQ15003 741 aa6.77□□□□□ -1.33
SNRPA1-209ENST00000560307 TUBB8Q3ZCM7 444 aa6.77□□□□□ -1.33
SNRPA1-209ENST00000560307 HSP90B2PQ58FF3 399 aa6.77□□□□□ -1.33
SNRPA1-209ENST00000560307 BEND6Q5SZJ8 279 aaPredicted RBP6.77□□□□□ -1.33
SNRPA1-209ENST00000560307 FAM173BQ6P4H8 233 aa6.77□□□□□ -1.33
SNRPA1-209ENST00000560307 HS2ST1Q7LGA3 356 aa6.77□□□□□ -1.33
SNRPA1-209ENST00000560307 BRAPQ7Z569 592 aa6.77□□□□□ -1.33
SNRPA1-209ENST00000560307 TADA2BQ86TJ2 420 aa6.77□□□□□ -1.33
SNRPA1-209ENST00000560307 TMEM139Q8IV31 216 aa6.77□□□□□ -1.33
SNRPA1-209ENST00000560307 ZNF654Q8IZM8 581 aa6.77□□□□□ -1.33
SNRPA1-209ENST00000560307 FBXL16Q8N461 479 aa6.77□□□□□ -1.33
SNRPA1-209ENST00000560307 ZNF280CQ8ND82 737 aa6.77□□□□□ -1.33
SNRPA1-209ENST00000560307 EPS8L3Q8TE67 593 aaKnown RBP6.77□□□□□ -1.33
SNRPA1-209ENST00000560307 STAG1Q8WVM7 1258 aa6.77□□□□□ -1.33
SNRPA1-209ENST00000560307 DNAAF4Q8WXU2 420 aa6.77□□□□□ -1.33
SNRPA1-209ENST00000560307 CCDC74AQ96AQ1 378 aa6.77□□□□□ -1.33
SNRPA1-209ENST00000560307 NAA15Q9BXJ9 866 aaKnown RBP6.77□□□□□ -1.33
SNRPA1-209ENST00000560307 AGXT2Q9BYV1 514 aa6.77□□□□□ -1.33
SNRPA1-209ENST00000560307 DONSONQ9NYP3 566 aa6.77□□□□□ -1.33
SNRPA1-209ENST00000560307 TUBE1Q9UJT0 475 aa6.77□□□□□ -1.33
SNRPA1-209ENST00000560307 GDF2Q9UK05 429 aaPredicted RBP6.77□□□□□ -1.33
SNRPA1-209ENST00000560307 FNDC3AQ9Y2H6 1198 aaKnown RBP6.77□□□□□ -1.33
SNRPA1-209ENST00000560307 PPP2R2CQ9Y2T4 447 aa6.77□□□□□ -1.33
SNRPA1-209ENST00000560307 FLT4P35916 1363 aa6.77□□□□□ -1.33
SNRPA1-209ENST00000560307 OVOS2A0A0G2JMS6 1433 aa6.76□□□□□ -1.33
SNRPA1-209ENST00000560307 UBAP1LF5GYI3 381 aa6.76□□□□□ -1.33
SNRPA1-209ENST00000560307 NPHP1O15259 732 aa6.76□□□□□ -1.33
SNRPA1-209ENST00000560307 CUTAO60888 179 aa6.76□□□□□ -1.33
SNRPA1-209ENST00000560307 PHACTR2O75167 634 aa6.76□□□□□ -1.33
SNRPA1-209ENST00000560307 TNFRSF21O75509 655 aa6.76□□□□□ -1.33
SNRPA1-209ENST00000560307 SLC3A2P08195 630 aaKnown RBP6.76□□□□□ -1.33
SNRPA1-209ENST00000560307 IFIT2P09913 472 aaKnown RBP6.76□□□□□ -1.33
SNRPA1-209ENST00000560307 CCDC172P0C7W6 258 aa6.76□□□□□ -1.33
SNRPA1-209ENST00000560307 TOP1P11387 765 aaKnown RBP6.76□□□□□ -1.33
SNRPA1-209ENST00000560307 CHMP4BP1P59074 171 aa6.76□□□□□ -1.33
SNRPA1-209ENST00000560307 NMIQ13287 307 aaPredicted RBP6.76□□□□□ -1.33
SNRPA1-209ENST00000560307 WHAMMP3Q1A5X7 153 aa6.76□□□□□ -1.33
SNRPA1-209ENST00000560307 MAP9Q49MG5 647 aa6.76□□□□□ -1.33
SNRPA1-209ENST00000560307 DNAJC21Q5F1R6 531 aaKnown RBP6.76□□□□□ -1.33
SNRPA1-209ENST00000560307 ARSJQ5FYB0 599 aaPredicted RBP6.76□□□□□ -1.33
SNRPA1-209ENST00000560307 CT47A1Q5JQC4 288 aaPredicted RBP6.76□□□□□ -1.33
SNRPA1-209ENST00000560307 WDR93Q6P2C0 686 aa6.76□□□□□ -1.33
SNRPA1-209ENST00000560307 GGT6Q6P531 493 aa6.76□□□□□ -1.33
SNRPA1-209ENST00000560307 SPATS2Q86XZ4 545 aaKnown RBP6.76□□□□□ -1.33
SNRPA1-209ENST00000560307 SLC43A3Q8NBI5 491 aa6.76□□□□□ -1.33
SNRPA1-209ENST00000560307 NSUN7Q8NE18 718 aaKnown RBP6.76□□□□□ -1.33
SNRPA1-209ENST00000560307 RUBCNQ92622 972 aa6.76□□□□□ -1.33
SNRPA1-209ENST00000560307 NEK1Q96PY6 1258 aa6.76□□□□□ -1.33
SNRPA1-209ENST00000560307 USP28Q96RU2 1077 aa6.76□□□□□ -1.33
SNRPA1-209ENST00000560307 C12orf49Q9H741 205 aa6.76□□□□□ -1.33
SNRPA1-209ENST00000560307 VPS18Q9P253 973 aa6.76□□□□□ -1.33
SNRPA1-209ENST00000560307 MYO1AQ9UBC5 1043 aa6.76□□□□□ -1.33
SNRPA1-209ENST00000560307 L1RE1Q9UN81 338 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms