RNA–Protein interactions for RNA: ENST00000560166.1

CLPX-206, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 3

Gene CLPX, Length 563 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-206ENST00000560166 VPS33BQ9H267 617 aa7.41□□□□□ -1.22
CLPX-206ENST00000560166 IGSF5Q9NSI5 407 aa7.41□□□□□ -1.22
CLPX-206ENST00000560166 HACL1Q9UJ83 578 aa7.41□□□□□ -1.22
CLPX-206ENST00000560166 SNED1Q8TER0 1413 aa7.41□□□□□ -1.22
CLPX-206ENST00000560166 LTBP1Q14766 1721 aa7.41□□□□□ -1.22
CLPX-206ENST00000560166 AOC2O75106 756 aa7.4□□□□□ -1.22
CLPX-206ENST00000560166 UFL1O94874 794 aa7.4□□□□□ -1.22
CLPX-206ENST00000560166 MAP4K4O95819 1239 aaPredicted RBP7.4□□□□□ -1.22
CLPX-206ENST00000560166 TXKP42681 527 aa7.4□□□□□ -1.22
CLPX-206ENST00000560166 PCBP4P57723 403 aaKnown RBP7.4□□□□□ -1.22
CLPX-206ENST00000560166 NMIQ13287 307 aaPredicted RBP7.4□□□□□ -1.22
CLPX-206ENST00000560166 COX20Q5RI15 118 aa7.4□□□□□ -1.22
CLPX-206ENST00000560166 SPTY2D1Q68D10 685 aaPredicted RBP7.4□□□□□ -1.22
CLPX-206ENST00000560166 CWC27Q6UX04 472 aaKnown RBP7.4□□□□□ -1.22
CLPX-206ENST00000560166 CERS3Q8IU89 383 aa7.4□□□□□ -1.22
CLPX-206ENST00000560166 RTKN2Q8IZC4 609 aa7.4□□□□□ -1.22
CLPX-206ENST00000560166 TBC1D16Q8TBP0 767 aa7.4□□□□□ -1.22
CLPX-206ENST00000560166 WDR66Q8TBY9 1149 aa7.4□□□□□ -1.22
CLPX-206ENST00000560166 KCNB2Q92953 911 aa7.4□□□□□ -1.22
CLPX-206ENST00000560166 MDFIQ99750 246 aa7.4□□□□□ -1.22
CLPX-206ENST00000560166 DSCC1Q9BVC3 393 aa7.4□□□□□ -1.22
CLPX-206ENST00000560166 C2orf49Q9BVC5 232 aaPredicted RBP7.4□□□□□ -1.22
CLPX-206ENST00000560166 COA1Q9GZY4 146 aa7.4□□□□□ -1.22
CLPX-206ENST00000560166 LSG1Q9H089 658 aaKnown RBP7.4□□□□□ -1.22
CLPX-206ENST00000560166 SUGT1Q9Y2Z0 365 aa7.4□□□□□ -1.22
CLPX-206ENST00000560166 USP3Q9Y6I4 520 aa7.4□□□□□ -1.22
CLPX-206ENST00000560166 CCDC171Q6TFL3 1326 aa7.4□□□□□ -1.22
CLPX-206ENST00000560166 RPAP1Q9BWH6 1393 aaPredicted RBP7.4□□□□□ -1.22
CLPX-206ENST00000560166 A0A1B0GUL6 1792 aa7.4□□□□□ -1.23
CLPX-206ENST00000560166 COL11A2P13942 1736 aaPredicted RBP7.39□□□□□ -1.23
CLPX-206ENST00000560166 COL1A1P02452 1464 aaPredicted RBP7.39□□□□□ -1.23
CLPX-206ENST00000560166 ZMYM6O95789 1325 aa7.39□□□□□ -1.23
CLPX-206ENST00000560166 FAM205AQ6ZU69 1335 aa7.39□□□□□ -1.23
CLPX-206ENST00000560166 ELOA3CA0A087WX78 387 aaPredicted RBP7.39□□□□□ -1.23
CLPX-206ENST00000560166 A0A0D9SFI3 127 aa7.39□□□□□ -1.23
CLPX-206ENST00000560166 ELOA3DA6NLF2 546 aaPredicted RBP7.39□□□□□ -1.23
CLPX-206ENST00000560166 NDUFB5O43674 189 aa7.39□□□□□ -1.23
CLPX-206ENST00000560166 PDE6AP16499 860 aa7.39□□□□□ -1.23
CLPX-206ENST00000560166 CD33P20138 364 aa7.39□□□□□ -1.23
CLPX-206ENST00000560166 HSPA4P34932 840 aa7.39□□□□□ -1.23
CLPX-206ENST00000560166 ADD2P35612 726 aa7.39□□□□□ -1.23
CLPX-206ENST00000560166 GYG1P46976 350 aa7.39□□□□□ -1.23
CLPX-206ENST00000560166 PSMA6P60900 246 aaKnown RBP7.39□□□□□ -1.23
CLPX-206ENST00000560166 RABEP1Q15276 862 aa7.39□□□□□ -1.23
CLPX-206ENST00000560166 MTFR1Q15390 333 aa7.39□□□□□ -1.23
CLPX-206ENST00000560166 TLR1Q15399 786 aa7.39□□□□□ -1.23
CLPX-206ENST00000560166 ELOA3BQ3SY89 546 aa7.39□□□□□ -1.23
CLPX-206ENST00000560166 DPP8Q6V1X1 898 aaPredicted RBP7.39□□□□□ -1.23
CLPX-206ENST00000560166 TMC7Q7Z402 723 aa7.39□□□□□ -1.23
CLPX-206ENST00000560166 PNMA8AQ86V59 439 aaPredicted RBP7.39□□□□□ -1.23
CLPX-206ENST00000560166 ELOA3Q8NG57 546 aa7.39□□□□□ -1.23
CLPX-206ENST00000560166 TBC1D22AQ8WUA7 517 aa7.39□□□□□ -1.23
CLPX-206ENST00000560166 MAP4K1Q92918 833 aa7.39□□□□□ -1.23
CLPX-206ENST00000560166 EDC3Q96F86 508 aaKnown RBP7.39□□□□□ -1.23
CLPX-206ENST00000560166 FAM227BQ96M60 508 aa7.39□□□□□ -1.23
CLPX-206ENST00000560166 PSMD1Q99460 953 aa7.39□□□□□ -1.23
CLPX-206ENST00000560166 ANTXR1Q9H6X2 564 aa7.39□□□□□ -1.23
CLPX-206ENST00000560166 PIH1D3Q9NQM4 214 aaKnown RBP7.39□□□□□ -1.23
CLPX-206ENST00000560166 POLLQ9UGP5 575 aa7.39□□□□□ -1.23
CLPX-206ENST00000560166 BRPF3Q9ULD4 1205 aa7.39□□□□□ -1.23
CLPX-206ENST00000560166 ARID1BQ8NFD5 2236 aaPredicted RBP7.38□□□□□ -1.23
CLPX-206ENST00000560166 MAST3O60307 1309 aa7.38□□□□□ -1.23
CLPX-206ENST00000560166 ZNF541Q9H0D2 1346 aa7.38□□□□□ -1.23
CLPX-206ENST00000560166 TCRBV5S4A2TA0A5A2 114 aa7.38□□□□□ -1.23
CLPX-206ENST00000560166 SNAP23O00161 211 aa7.38□□□□□ -1.23
CLPX-206ENST00000560166 TNFRSF10BO14763 440 aa7.38□□□□□ -1.23
CLPX-206ENST00000560166 CA12O43570 354 aa7.38□□□□□ -1.23
CLPX-206ENST00000560166 IDH1O75874 414 aaKnown RBP7.38□□□□□ -1.23
CLPX-206ENST00000560166 GNAT2P19087 354 aa7.38□□□□□ -1.23
CLPX-206ENST00000560166 KLRK1P26718 216 aa7.38□□□□□ -1.23
CLPX-206ENST00000560166 EIF1AXP47813 144 aaKnown RBP7.38□□□□□ -1.23
CLPX-206ENST00000560166 FKBP1AP62942 108 aaKnown RBP7.38□□□□□ -1.23
CLPX-206ENST00000560166 FMR1Q06787 632 aaKnown RBP eCLIP7.38□□□□□ -1.23
CLPX-206ENST00000560166 CCDC93Q567U6 631 aa7.38□□□□□ -1.23
CLPX-206ENST00000560166 SLC9C2Q5TAH2 1124 aa7.38□□□□□ -1.23
CLPX-206ENST00000560166 PI16Q6UXB8 463 aa7.38□□□□□ -1.23
CLPX-206ENST00000560166 STAG2Q8N3U4 1231 aa7.38□□□□□ -1.23
CLPX-206ENST00000560166 SNX21Q969T3 373 aa7.38□□□□□ -1.23
CLPX-206ENST00000560166 RBCK1Q9BYM8 510 aa7.38□□□□□ -1.23
CLPX-206ENST00000560166 TM6SF1Q9BZW5 370 aa7.38□□□□□ -1.23
CLPX-206ENST00000560166 ZC3H12CQ9C0D7 883 aaKnown RBP7.38□□□□□ -1.23
CLPX-206ENST00000560166 IL25Q9H293 177 aa7.38□□□□□ -1.23
CLPX-206ENST00000560166 CD209Q9NNX6 404 aa7.38□□□□□ -1.23
CLPX-206ENST00000560166 PRDM6Q9NQX0 595 aa7.38□□□□□ -1.23
CLPX-206ENST00000560166 STIM2Q9P246 746 aa7.38□□□□□ -1.23
CLPX-206ENST00000560166 CTNNA3Q9UI47 895 aa7.38□□□□□ -1.23
CLPX-206ENST00000560166 DLEC1Q9Y238 1755 aa7.38□□□□□ -1.23
CLPX-206ENST00000560166 LTBP3Q9NS15 1303 aa7.37□□□□□ -1.23
CLPX-206ENST00000560166 SCN4AP35499 1836 aa7.37□□□□□ -1.23
CLPX-206ENST00000560166 FAM229AH3BQW9 127 aa7.37□□□□□ -1.23
CLPX-206ENST00000560166 CDK2AP1O14519 115 aa7.37□□□□□ -1.23
CLPX-206ENST00000560166 PAX4O43316 350 aa7.37□□□□□ -1.23
CLPX-206ENST00000560166 FRAT2O75474 233 aaPredicted RBP7.37□□□□□ -1.23
CLPX-206ENST00000560166 P4HBP07237 508 aaKnown RBP7.37□□□□□ -1.23
CLPX-206ENST00000560166 ZKSCAN1P17029 563 aaPredicted RBP7.37□□□□□ -1.23
CLPX-206ENST00000560166 ATP4AP20648 1035 aa7.37□□□□□ -1.23
CLPX-206ENST00000560166 ALAS2P22557 587 aa7.37□□□□□ -1.23
CLPX-206ENST00000560166 GSTO1P78417 241 aa7.37□□□□□ -1.23
CLPX-206ENST00000560166 KIAA2012Q0VF49 1180 aa7.37□□□□□ -1.23
CLPX-206ENST00000560166 BECN1Q14457 450 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms