RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 ABCB11O95342 1321 aa16.54■□□□□ 0.24
SMAD6-204ENST00000559931 ADGRA2Q96PE1 1338 aa16.54■□□□□ 0.24
SMAD6-204ENST00000559931 STK36Q9NRP7 1315 aa16.54■□□□□ 0.24
SMAD6-204ENST00000559931 PPP1R11O60927 126 aaPredicted RBP16.54■□□□□ 0.24
SMAD6-204ENST00000559931 SLC25A27O95847 323 aa16.54■□□□□ 0.24
SMAD6-204ENST00000559931 BCRP11274 1271 aa16.54■□□□□ 0.24
SMAD6-204ENST00000559931 TAL1P17542 331 aaPredicted RBP16.54■□□□□ 0.24
SMAD6-204ENST00000559931 COPB2P35606 906 aa16.54■□□□□ 0.24
SMAD6-204ENST00000559931 NAPAP54920 295 aa16.54■□□□□ 0.24
SMAD6-204ENST00000559931 KIF22Q14807 665 aa16.54■□□□□ 0.24
SMAD6-204ENST00000559931 TKFCQ3LXA3 575 aa16.54■□□□□ 0.24
SMAD6-204ENST00000559931 ALG1Q9BT22 464 aa16.54■□□□□ 0.24
SMAD6-204ENST00000559931 RNF146Q9NTX7 359 aa16.54■□□□□ 0.24
SMAD6-204ENST00000559931 MRPL11Q9Y3B7 192 aaKnown RBP16.54■□□□□ 0.24
SMAD6-204ENST00000559931 KIF3AQ9Y496 699 aa16.54■□□□□ 0.24
SMAD6-204ENST00000559931 RIPK3Q9Y572 518 aa16.54■□□□□ 0.24
SMAD6-204ENST00000559931 XBP1P17861 261 aa16.53■□□□□ 0.24
SMAD6-204ENST00000559931 ERCC3P19447 782 aa16.53■□□□□ 0.24
SMAD6-204ENST00000559931 GJB2P29033 226 aa16.53■□□□□ 0.24
SMAD6-204ENST00000559931 FOSBP53539 338 aa16.53■□□□□ 0.24
SMAD6-204ENST00000559931 SP3Q02447 781 aa16.53■□□□□ 0.24
SMAD6-204ENST00000559931 TRIM29Q14134 588 aa16.53■□□□□ 0.24
SMAD6-204ENST00000559931 PKN1Q16512 942 aa16.53■□□□□ 0.24
SMAD6-204ENST00000559931 WWC2Q6AWC2 1192 aa16.53■□□□□ 0.24
SMAD6-204ENST00000559931 SMARCC2Q8TAQ2 1214 aa16.53■□□□□ 0.24
SMAD6-204ENST00000559931 CFHR5Q9BXR6 569 aa16.53■□□□□ 0.24
SMAD6-204ENST00000559931 MROH8Q9H579 483 aa16.53■□□□□ 0.24
SMAD6-204ENST00000559931 EFCC1Q9HA90 598 aa16.53■□□□□ 0.24
SMAD6-204ENST00000559931 hCG_1984214I3L0E3 225 aa16.52■□□□□ 0.24
SMAD6-204ENST00000559931 GPR25O00155 361 aa16.52■□□□□ 0.24
SMAD6-204ENST00000559931 FDPSP14324 419 aaKnown RBP16.52■□□□□ 0.24
SMAD6-204ENST00000559931 MAPK4P31152 587 aa16.52■□□□□ 0.24
SMAD6-204ENST00000559931 ZNF713Q8N859 430 aaPredicted RBP16.52■□□□□ 0.24
SMAD6-204ENST00000559931 CHST13Q8NET6 341 aa16.52■□□□□ 0.24
SMAD6-204ENST00000559931 CCDC12Q8WUD4 166 aaPredicted RBP16.52■□□□□ 0.24
SMAD6-204ENST00000559931 INTS4Q96HW7 963 aaKnown RBP16.52■□□□□ 0.24
SMAD6-204ENST00000559931 AIFM3Q96NN9 605 aa16.52■□□□□ 0.24
SMAD6-204ENST00000559931 PORCNQ9H237 461 aa16.52■□□□□ 0.24
SMAD6-204ENST00000559931 ACAD9Q9H845 621 aa16.52■□□□□ 0.24
SMAD6-204ENST00000559931 BARHL2Q9NY43 387 aa16.52■□□□□ 0.24
SMAD6-204ENST00000559931 VPS54Q9P1Q0 977 aa16.52■□□□□ 0.24
SMAD6-204ENST00000559931 FBXO40Q9UH90 709 aa16.52■□□□□ 0.24
SMAD6-204ENST00000559931 IVNS1ABPQ9Y6Y0 642 aa16.52■□□□□ 0.24
SMAD6-204ENST00000559931 A0A0G2JMZ2 1700 aa16.52■□□□□ 0.24
SMAD6-204ENST00000559931 STXBP3O00186 592 aa16.51■□□□□ 0.23
SMAD6-204ENST00000559931 NLRP5P59047 1200 aa16.51■□□□□ 0.23
SMAD6-204ENST00000559931 MUM1L1Q5H9M0 696 aa16.51■□□□□ 0.23
SMAD6-204ENST00000559931 NSMFQ6X4W1 530 aa16.51■□□□□ 0.23
SMAD6-204ENST00000559931 MCF2L2Q86YR7 1114 aa16.51■□□□□ 0.23
SMAD6-204ENST00000559931 ANKRD35Q8N283 1001 aa16.51■□□□□ 0.23
SMAD6-204ENST00000559931 SHCBP1Q8NEM2 672 aa16.51■□□□□ 0.23
SMAD6-204ENST00000559931 SMCO2A6NFE2 343 aa16.5■□□□□ 0.23
SMAD6-204ENST00000559931 FKTNO75072 461 aa16.5■□□□□ 0.23
SMAD6-204ENST00000559931 CFBP00751 764 aa16.5■□□□□ 0.23
SMAD6-204ENST00000559931 FCER1AP12319 257 aa16.5■□□□□ 0.23
SMAD6-204ENST00000559931 FCGRTP55899 365 aa16.5■□□□□ 0.23
SMAD6-204ENST00000559931 KCTD2Q14681 263 aa16.5■□□□□ 0.23
SMAD6-204ENST00000559931 PLEKHH3Q7Z736 793 aa16.5■□□□□ 0.23
SMAD6-204ENST00000559931 CCDC148Q8NFR7 591 aa16.5■□□□□ 0.23
SMAD6-204ENST00000559931 ZNF296Q8WUU4 475 aaPredicted RBP16.5■□□□□ 0.23
SMAD6-204ENST00000559931 CUL5Q93034 780 aa16.5■□□□□ 0.23
SMAD6-204ENST00000559931 C8orf76Q96K31 380 aa16.5■□□□□ 0.23
SMAD6-204ENST00000559931 MMP19Q99542 508 aa16.5■□□□□ 0.23
SMAD6-204ENST00000559931 PSTPIP2Q9H939 334 aa16.5■□□□□ 0.23
SMAD6-204ENST00000559931 C6orf50Q9HD87 102 aa16.5■□□□□ 0.23
SMAD6-204ENST00000559931 SH3GLB2Q9NR46 395 aa16.5■□□□□ 0.23
SMAD6-204ENST00000559931 ZNFX1Q9P2E3 1918 aaKnown RBP16.49■□□□□ 0.23
SMAD6-204ENST00000559931 NFIBO00712 420 aa16.49■□□□□ 0.23
SMAD6-204ENST00000559931 TNPO2O14787 897 aaKnown RBP16.49■□□□□ 0.23
SMAD6-204ENST00000559931 PSMC4P43686 418 aa16.49■□□□□ 0.23
SMAD6-204ENST00000559931 ADCY7P51828 1080 aa16.49■□□□□ 0.23
SMAD6-204ENST00000559931 MRPL12P52815 198 aaKnown RBP16.49■□□□□ 0.23
SMAD6-204ENST00000559931 LACTBP83111 547 aaPredicted RBP16.49■□□□□ 0.23
SMAD6-204ENST00000559931 LARP1BQ659C4 914 aaKnown RBP16.49■□□□□ 0.23
SMAD6-204ENST00000559931 PPP1R18Q6NYC8 613 aa16.49■□□□□ 0.23
SMAD6-204ENST00000559931 RNF207Q6ZRF8 634 aa16.49■□□□□ 0.23
SMAD6-204ENST00000559931 CLEC4DQ8WXI8 215 aa16.49■□□□□ 0.23
SMAD6-204ENST00000559931 ERO1AQ96HE7 468 aa16.49■□□□□ 0.23
SMAD6-204ENST00000559931 PRDM10Q9NQV6 1147 aa16.49■□□□□ 0.23
SMAD6-204ENST00000559931 DOCK3Q8IZD9 2030 aa16.48■□□□□ 0.23
SMAD6-204ENST00000559931 H3BQV1 296 aa16.48■□□□□ 0.23
SMAD6-204ENST00000559931 GCOM1H8Y6P7 765 aaPredicted RBP16.48■□□□□ 0.23
SMAD6-204ENST00000559931 STRNO43815 780 aa16.48■□□□□ 0.23
SMAD6-204ENST00000559931 POLR2MP0CAP2 368 aa16.48■□□□□ 0.23
SMAD6-204ENST00000559931 CALML3P27482 149 aa16.48■□□□□ 0.23
SMAD6-204ENST00000559931 GNA11P29992 359 aa16.48■□□□□ 0.23
SMAD6-204ENST00000559931 GUCY1B3Q02153 619 aa16.48■□□□□ 0.23
SMAD6-204ENST00000559931 ARHGEF6Q15052 776 aa16.48■□□□□ 0.23
SMAD6-204ENST00000559931 IFFO2Q5TF58 517 aa16.48■□□□□ 0.23
SMAD6-204ENST00000559931 TYW1BQ6NUM6 668 aa16.48■□□□□ 0.23
SMAD6-204ENST00000559931 GPR142Q7Z601 462 aa16.48■□□□□ 0.23
SMAD6-204ENST00000559931 CD99L2Q8TCZ2 262 aa16.48■□□□□ 0.23
SMAD6-204ENST00000559931 TBC1D5Q92609 795 aa16.48■□□□□ 0.23
SMAD6-204ENST00000559931 GJB4Q9NTQ9 266 aa16.48■□□□□ 0.23
SMAD6-204ENST00000559931 KCNJ14Q9UNX9 436 aa16.48■□□□□ 0.23
SMAD6-204ENST00000559931 ZSWIM8A7E2V4 1837 aa16.47■□□□□ 0.23
SMAD6-204ENST00000559931 PDCP20941 246 aa16.47■□□□□ 0.23
SMAD6-204ENST00000559931 HOXA13P31271 388 aaPredicted RBP16.47■□□□□ 0.23
SMAD6-204ENST00000559931 BAATQ14032 418 aaPredicted RBP16.47■□□□□ 0.23
SMAD6-204ENST00000559931 SAFBQ15424 915 aaKnown RBP eCLIP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms