RNA–Protein interactions for RNA: ENST00000559891.1

TM2D3-208, Transcript of TM2 domain containing 3, humanhuman

TSL 1 (best)

Gene TM2D3, Length 2,133 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-208ENST00000559891 HERVK_113P62684 666 aa13.33□□□□□ -0.28
TM2D3-208ENST00000559891 IRX3P78415 501 aaPredicted RBP13.33□□□□□ -0.28
TM2D3-208ENST00000559891 FOXD4L6Q3SYB3 417 aaPredicted RBP13.33□□□□□ -0.28
TM2D3-208ENST00000559891 FOXD4L3Q6VB84 417 aaPredicted RBP13.33□□□□□ -0.28
TM2D3-208ENST00000559891 C8orf76Q96K31 380 aa13.33□□□□□ -0.28
TM2D3-208ENST00000559891 PAGR1Q9BTK6 254 aa13.33□□□□□ -0.28
TM2D3-208ENST00000559891 HOMER2Q9NSB8 354 aa13.33□□□□□ -0.28
TM2D3-208ENST00000559891 RBPJLQ9UBG7 517 aa13.33□□□□□ -0.28
TM2D3-208ENST00000559891 SEC63Q9UGP8 760 aaKnown RBP13.33□□□□□ -0.28
TM2D3-208ENST00000559891 CENPFP49454 3210 aa13.33□□□□□ -0.28
TM2D3-208ENST00000559891 TESPA1A2RU30 521 aaPredicted RBP13.33□□□□□ -0.28
TM2D3-208ENST00000559891 KIF28PB7ZC32 967 aa13.33□□□□□ -0.28
TM2D3-208ENST00000559891 OPLAHO14841 1288 aa13.33□□□□□ -0.28
TM2D3-208ENST00000559891 OFD1O75665 1012 aa13.33□□□□□ -0.28
TM2D3-208ENST00000559891 CNMDO75829 334 aa13.33□□□□□ -0.28
TM2D3-208ENST00000559891 MSNP26038 577 aaKnown RBP13.33□□□□□ -0.28
TM2D3-208ENST00000559891 VEGFBP49765 207 aa13.33□□□□□ -0.28
TM2D3-208ENST00000559891 FAM173BQ6P4H8 233 aa13.33□□□□□ -0.28
TM2D3-208ENST00000559891 RASGRP4Q8TDF6 673 aa13.33□□□□□ -0.28
TM2D3-208ENST00000559891 CCDC102AQ96A19 550 aa13.33□□□□□ -0.28
TM2D3-208ENST00000559891 HHIPL1Q96JK4 782 aa13.33□□□□□ -0.28
TM2D3-208ENST00000559891 BARHL2Q9NY43 387 aa13.33□□□□□ -0.28
TM2D3-208ENST00000559891 ZNF214Q9UL59 606 aaPredicted RBP13.33□□□□□ -0.28
TM2D3-208ENST00000559891 MTMR6Q9Y217 621 aa13.33□□□□□ -0.28
TM2D3-208ENST00000559891 PCDHA1Q9Y5I3 950 aa13.33□□□□□ -0.28
TM2D3-208ENST00000559891 STX6O43752 255 aa13.32□□□□□ -0.28
TM2D3-208ENST00000559891 BRD1O95696 1058 aa13.32□□□□□ -0.28
TM2D3-208ENST00000559891 MBD3O95983 291 aa13.32□□□□□ -0.28
TM2D3-208ENST00000559891 NR5A1Q13285 461 aa13.32□□□□□ -0.28
TM2D3-208ENST00000559891 HSP90AA2PQ14568 343 aaPredicted RBP13.32□□□□□ -0.28
TM2D3-208ENST00000559891 PLS1Q14651 629 aa13.32□□□□□ -0.28
TM2D3-208ENST00000559891 MUM1L1Q5H9M0 696 aa13.32□□□□□ -0.28
TM2D3-208ENST00000559891 EARS2Q5JPH6 523 aaKnown RBP13.32□□□□□ -0.28
TM2D3-208ENST00000559891 LRSAM1Q6UWE0 723 aa13.32□□□□□ -0.28
TM2D3-208ENST00000559891 FBXO11Q86XK2 927 aa13.32□□□□□ -0.28
TM2D3-208ENST00000559891 IFNL1Q8IU54 200 aa13.32□□□□□ -0.28
TM2D3-208ENST00000559891 FBXO18Q8NFZ0 1043 aa13.32□□□□□ -0.28
TM2D3-208ENST00000559891 FAM205CA6NFA0 338 aa13.31□□□□□ -0.28
TM2D3-208ENST00000559891 NAPAP54920 295 aa13.31□□□□□ -0.28
TM2D3-208ENST00000559891 LBX2Q6XYB7 198 aa13.31□□□□□ -0.28
TM2D3-208ENST00000559891 ANKRD23Q86SG2 305 aa13.31□□□□□ -0.28
TM2D3-208ENST00000559891 HOXC10Q9NYD6 342 aa13.31□□□□□ -0.28
TM2D3-208ENST00000559891 NOL7Q9UMY1 257 aaKnown RBP13.31□□□□□ -0.28
TM2D3-208ENST00000559891 MANSC4A6NHS7 340 aaPredicted RBP13.31□□□□□ -0.28
TM2D3-208ENST00000559891 BTBD18B2RXH4 712 aa13.31□□□□□ -0.28
TM2D3-208ENST00000559891 NFIBO00712 420 aa13.31□□□□□ -0.28
TM2D3-208ENST00000559891 ALAS1P13196 640 aa13.31□□□□□ -0.28
TM2D3-208ENST00000559891 TERF1P54274 439 aa13.31□□□□□ -0.28
TM2D3-208ENST00000559891 ANKRD13CQ8N6S4 541 aa13.31□□□□□ -0.28
TM2D3-208ENST00000559891 PGBD1Q96JS3 809 aa13.31□□□□□ -0.28
TM2D3-208ENST00000559891 PHF20Q9BVI0 1012 aa13.31□□□□□ -0.28
TM2D3-208ENST00000559891 AMNQ9BXJ7 453 aa13.31□□□□□ -0.28
TM2D3-208ENST00000559891 TMEM260Q9NX78 707 aa13.31□□□□□ -0.28
TM2D3-208ENST00000559891 TMEM63CQ9P1W3 806 aa13.31□□□□□ -0.28
TM2D3-208ENST00000559891 RBM27Q9P2N5 1060 aaKnown RBP13.31□□□□□ -0.28
TM2D3-208ENST00000559891 CCPG1Q9ULG6 757 aa13.31□□□□□ -0.28
TM2D3-208ENST00000559891 WDR33Q9C0J8 1336 aaKnown RBP13.3□□□□□ -0.28
TM2D3-208ENST00000559891 ICAM1P05362 532 aa13.3□□□□□ -0.28
TM2D3-208ENST00000559891 C1QTNF8P60827 252 aa13.3□□□□□ -0.28
TM2D3-208ENST00000559891 UBE2SQ16763 222 aa13.3□□□□□ -0.28
TM2D3-208ENST00000559891 SNRNP48Q6IEG0 339 aaKnown RBP13.3□□□□□ -0.28
TM2D3-208ENST00000559891 USP17L6PQ6QN14 398 aa13.3□□□□□ -0.28
TM2D3-208ENST00000559891 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.3□□□□□ -0.28
TM2D3-208ENST00000559891 PURBQ96QR8 312 aaKnown RBP13.3□□□□□ -0.28
TM2D3-208ENST00000559891 SMCO2A6NFE2 343 aa13.3□□□□□ -0.28
TM2D3-208ENST00000559891 H3BQV1 296 aa13.3□□□□□ -0.28
TM2D3-208ENST00000559891 ZBED4O75132 1171 aa13.3□□□□□ -0.28
TM2D3-208ENST00000559891 MMP1P03956 469 aa13.3□□□□□ -0.28
TM2D3-208ENST00000559891 OSBPP22059 807 aa13.3□□□□□ -0.28
TM2D3-208ENST00000559891 HOXA13P31271 388 aaPredicted RBP13.3□□□□□ -0.28
TM2D3-208ENST00000559891 NLRP5P59047 1200 aa13.3□□□□□ -0.28
TM2D3-208ENST00000559891 IFFO2Q5TF58 517 aa13.3□□□□□ -0.28
TM2D3-208ENST00000559891 SMCR8Q8TEV9 937 aaPredicted RBP13.3□□□□□ -0.28
TM2D3-208ENST00000559891 CPA4Q9UI42 421 aa13.3□□□□□ -0.28
TM2D3-208ENST00000559891 A0A0G2JMZ2 1700 aa13.29□□□□□ -0.28
TM2D3-208ENST00000559891 ZNF500O60304 480 aaPredicted RBP13.29□□□□□ -0.28
TM2D3-208ENST00000559891 GLIPR1L2Q4G1C9 344 aa13.29□□□□□ -0.28
TM2D3-208ENST00000559891 DIS3L2Q8IYB7 885 aaKnown RBP13.29□□□□□ -0.28
TM2D3-208ENST00000559891 CLEC4DQ8WXI8 215 aa13.29□□□□□ -0.28
TM2D3-208ENST00000559891 PORCNQ9H237 461 aa13.29□□□□□ -0.28
TM2D3-208ENST00000559891 BIN2Q9UBW5 565 aaPredicted RBP13.29□□□□□ -0.28
TM2D3-208ENST00000559891 STAT3P40763 770 aa13.28□□□□□ -0.28
TM2D3-208ENST00000559891 TM4SF4P48230 202 aa13.28□□□□□ -0.28
TM2D3-208ENST00000559891 NOGQ13253 232 aa13.28□□□□□ -0.28
TM2D3-208ENST00000559891 TAF1CQ15572 869 aaPredicted RBP13.28□□□□□ -0.28
TM2D3-208ENST00000559891 WASF1Q92558 559 aa13.28□□□□□ -0.28
TM2D3-208ENST00000559891 MOV10L1Q9BXT6 1211 aaKnown RBP13.28□□□□□ -0.28
TM2D3-208ENST00000559891 WNT7AO00755 349 aa13.28□□□□□ -0.28
TM2D3-208ENST00000559891 CRHR2Q13324 411 aa13.28□□□□□ -0.28
TM2D3-208ENST00000559891 TRERF1Q96PN7 1200 aa13.28□□□□□ -0.28
TM2D3-208ENST00000559891 SPATC1LQ9H0A9 340 aa13.28□□□□□ -0.28
TM2D3-208ENST00000559891 ZMYND12Q9H0C1 365 aa13.28□□□□□ -0.28
TM2D3-208ENST00000559891 EFCC1Q9HA90 598 aa13.28□□□□□ -0.28
TM2D3-208ENST00000559891 CTDP1Q9Y5B0 961 aaPredicted RBP13.28□□□□□ -0.28
TM2D3-208ENST00000559891 MYPNQ86TC9 1320 aa13.27□□□□□ -0.28
TM2D3-208ENST00000559891 SYCE3A1L190 88 aa13.27□□□□□ -0.28
TM2D3-208ENST00000559891 MEIS2O14770 477 aa13.27□□□□□ -0.28
TM2D3-208ENST00000559891 CFBP00751 764 aa13.27□□□□□ -0.28
TM2D3-208ENST00000559891 ZSCAN22P10073 491 aaPredicted RBP13.27□□□□□ -0.28
TM2D3-208ENST00000559891 PABPC4Q13310 644 aaKnown RBP eCLIP13.27□□□□□ -0.286e-8■■■■□ 26.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms