RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 PDGFCQ9NRA1 345 aa13.2□□□□□ -0.3
HERC1-204ENST00000559715 HOMER2Q9NSB8 354 aa13.2□□□□□ -0.3
HERC1-204ENST00000559715 SCN5AQ14524 2016 aa13.2□□□□□ -0.3
HERC1-204ENST00000559715 TET1Q8NFU7 2136 aa13.19□□□□□ -0.3
HERC1-204ENST00000559715 APPP05067 770 aa13.19□□□□□ -0.3
HERC1-204ENST00000559715 FDX1P10109 184 aa13.19□□□□□ -0.3
HERC1-204ENST00000559715 FOSL2P15408 326 aa13.19□□□□□ -0.3
HERC1-204ENST00000559715 SMPD1P17405 629 aa13.19□□□□□ -0.3
HERC1-204ENST00000559715 MCCP23508 829 aa13.19□□□□□ -0.3
HERC1-204ENST00000559715 STAT2P52630 851 aa13.19□□□□□ -0.3
HERC1-204ENST00000559715 SNAP25P60880 206 aa13.19□□□□□ -0.3
HERC1-204ENST00000559715 VPS53Q5VIR6 699 aa13.19□□□□□ -0.3
HERC1-204ENST00000559715 CCDC129Q6ZRS4 1044 aa13.19□□□□□ -0.3
HERC1-204ENST00000559715 ZNF365Q70YC5 407 aa13.19□□□□□ -0.3
HERC1-204ENST00000559715 MORC4Q8TE76 937 aa13.19□□□□□ -0.3
HERC1-204ENST00000559715 RNF146Q9NTX7 359 aa13.19□□□□□ -0.3
HERC1-204ENST00000559715 CXXC1Q9P0U4 656 aaPredicted RBP13.19□□□□□ -0.3
HERC1-204ENST00000559715 SCN10AQ9Y5Y9 1956 aa13.19□□□□□ -0.3
HERC1-204ENST00000559715 MROH7Q68CQ1 1323 aa13.18□□□□□ -0.3
HERC1-204ENST00000559715 A0A0U1RQG5 324 aaPredicted RBP13.18□□□□□ -0.3
HERC1-204ENST00000559715 TSPY3P0CV98 308 aa13.18□□□□□ -0.3
HERC1-204ENST00000559715 TSPY8P0CW00 308 aa13.18□□□□□ -0.3
HERC1-204ENST00000559715 ACRP10323 421 aa13.18□□□□□ -0.3
HERC1-204ENST00000559715 CYP2C18P33260 490 aa13.18□□□□□ -0.3
HERC1-204ENST00000559715 TNFAIP2Q03169 654 aa13.18□□□□□ -0.3
HERC1-204ENST00000559715 RCSD1Q6JBY9 416 aa13.18□□□□□ -0.3
HERC1-204ENST00000559715 CXCL17Q6UXB2 119 aa13.18□□□□□ -0.3
HERC1-204ENST00000559715 KCTD1Q719H9 257 aa13.18□□□□□ -0.3
HERC1-204ENST00000559715 CHMP4CQ96CF2 233 aa13.18□□□□□ -0.3
HERC1-204ENST00000559715 TRERF1Q96PN7 1200 aa13.18□□□□□ -0.3
HERC1-204ENST00000559715 ACAD9Q9H845 621 aa13.18□□□□□ -0.3
HERC1-204ENST00000559715 ZNF287Q9HBT7 754 aa13.18□□□□□ -0.3
HERC1-204ENST00000559715 PRDM6Q9NQX0 595 aa13.18□□□□□ -0.3
HERC1-204ENST00000559715 CYP39A1Q9NYL5 469 aa13.18□□□□□ -0.3
HERC1-204ENST00000559715 ANAPC4Q9UJX5 808 aa13.18□□□□□ -0.3
HERC1-204ENST00000559715 PRR12Q9ULL5 1215 aa13.18□□□□□ -0.3
HERC1-204ENST00000559715 CTDSPL2Q05D32 466 aa13.17□□□□□ -0.3
HERC1-204ENST00000559715 PDE4BQ07343 736 aa13.17□□□□□ -0.3
HERC1-204ENST00000559715 ADGRE1Q14246 886 aa13.17□□□□□ -0.3
HERC1-204ENST00000559715 FAM160B2Q86V87 743 aa13.17□□□□□ -0.3
HERC1-204ENST00000559715 CHURC1Q8WUH1 139 aa13.17□□□□□ -0.3
HERC1-204ENST00000559715 HERVK_113Q902F9 699 aa13.17□□□□□ -0.3
HERC1-204ENST00000559715 TIFAQ96CG3 184 aa13.17□□□□□ -0.3
HERC1-204ENST00000559715 PPP1R12CQ9BZL4 782 aa13.17□□□□□ -0.3
HERC1-204ENST00000559715 WNT8AQ9H1J5 351 aa13.17□□□□□ -0.3
HERC1-204ENST00000559715 PRRC2BQ5JSZ5 2229 aaKnown RBP13.17□□□□□ -0.3
HERC1-204ENST00000559715 PTPRSQ13332 1948 aa13.16□□□□□ -0.3
HERC1-204ENST00000559715 SLC1A4P43007 532 aa13.16□□□□□ -0.3
HERC1-204ENST00000559715 PPIGQ13427 754 aaKnown RBP eCLIP13.16□□□□□ -0.3
HERC1-204ENST00000559715 FSCN1Q16658 493 aaKnown RBP13.16□□□□□ -0.3
HERC1-204ENST00000559715 TKFCQ3LXA3 575 aa13.16□□□□□ -0.3
HERC1-204ENST00000559715 TTBK2Q6IQ55 1244 aa13.16□□□□□ -0.3
HERC1-204ENST00000559715 BTNL9Q6UXG8 535 aa13.16□□□□□ -0.3
HERC1-204ENST00000559715 GPATCH3Q96I76 525 aa13.16□□□□□ -0.3
HERC1-204ENST00000559715 NOC4LQ9BVI4 516 aaKnown RBP13.16□□□□□ -0.3
HERC1-204ENST00000559715 NAPBQ9H115 298 aa13.16□□□□□ -0.3
HERC1-204ENST00000559715 TRPV6Q9H1D0 765 aa13.16□□□□□ -0.3
HERC1-204ENST00000559715 IL23AQ9NPF7 189 aa13.16□□□□□ -0.3
HERC1-204ENST00000559715 TRIP12Q14669 1992 aaPredicted RBP13.16□□□□□ -0.3
HERC1-204ENST00000559715 BRWD1Q9NSI6 2320 aa13.16□□□□□ -0.3
HERC1-204ENST00000559715 ORC4O43929 436 aa13.15□□□□□ -0.3
HERC1-204ENST00000559715 B4GALT4O60513 344 aa13.15□□□□□ -0.3
HERC1-204ENST00000559715 ALAS1P13196 640 aa13.15□□□□□ -0.3
HERC1-204ENST00000559715 C1QBPQ07021 282 aaKnown RBP13.15□□□□□ -0.3
HERC1-204ENST00000559715 ITGA7Q13683 1181 aa13.15□□□□□ -0.3
HERC1-204ENST00000559715 ALX1Q15699 326 aa13.15□□□□□ -0.3
HERC1-204ENST00000559715 TLK2Q86UE8 772 aa13.15□□□□□ -0.3
HERC1-204ENST00000559715 NACAP1Q9BZK3 213 aa13.15□□□□□ -0.3
HERC1-204ENST00000559715 RANBP17Q9H2T7 1088 aaKnown RBP13.15□□□□□ -0.3
HERC1-204ENST00000559715 SPC25Q9HBM1 224 aa13.15□□□□□ -0.3
HERC1-204ENST00000559715 STX8Q9UNK0 236 aa13.15□□□□□ -0.3
HERC1-204ENST00000559715 YBX2Q9Y2T7 364 aaKnown RBP13.15□□□□□ -0.3
HERC1-204ENST00000559715 Q9Y3F1 56 aa13.15□□□□□ -0.3
HERC1-204ENST00000559715 RBM47A0AV96 593 aaKnown RBP13.14□□□□□ -0.31
HERC1-204ENST00000559715 ASB14A6NK59 587 aa13.14□□□□□ -0.31
HERC1-204ENST00000559715 DYNC1LI2O43237 492 aaPredicted RBP13.14□□□□□ -0.31
HERC1-204ENST00000559715 ICAM1P05362 532 aa13.14□□□□□ -0.31
HERC1-204ENST00000559715 MX1P20591 662 aa13.14□□□□□ -0.31
HERC1-204ENST00000559715 PSMC6P62333 389 aa13.14□□□□□ -0.31
HERC1-204ENST00000559715 IQSEC1Q6DN90 963 aa13.14□□□□□ -0.31
HERC1-204ENST00000559715 CCDC174Q6PII3 467 aa13.14□□□□□ -0.31
HERC1-204ENST00000559715 EEPD1Q7L9B9 569 aa13.14□□□□□ -0.31
HERC1-204ENST00000559715 FBXO16Q8IX29 292 aaPredicted RBP13.14□□□□□ -0.31
HERC1-204ENST00000559715 TMEM199Q8N511 208 aa13.14□□□□□ -0.31
HERC1-204ENST00000559715 CLEC4DQ8WXI8 215 aa13.14□□□□□ -0.31
HERC1-204ENST00000559715 VTI1AQ96AJ9 217 aa13.14□□□□□ -0.31
HERC1-204ENST00000559715 FSD1Q9BTV5 496 aa13.14□□□□□ -0.31
HERC1-204ENST00000559715 PRDM12Q9H4Q4 367 aa13.14□□□□□ -0.31
HERC1-204ENST00000559715 CTDP1Q9Y5B0 961 aaPredicted RBP13.14□□□□□ -0.31
HERC1-204ENST00000559715 NFIBO00712 420 aa13.13□□□□□ -0.31
HERC1-204ENST00000559715 ERC2O15083 957 aa13.13□□□□□ -0.31
HERC1-204ENST00000559715 CABYRO75952 493 aa13.13□□□□□ -0.31
HERC1-204ENST00000559715 FGAP02671 866 aa13.13□□□□□ -0.31
HERC1-204ENST00000559715 SLC16A2P36021 539 aa13.13□□□□□ -0.31
HERC1-204ENST00000559715 BAATQ14032 418 aaPredicted RBP13.13□□□□□ -0.31
HERC1-204ENST00000559715 DUSP28Q4G0W2 176 aa13.13□□□□□ -0.31
HERC1-204ENST00000559715 AKNAD1Q5T1N1 836 aa13.13□□□□□ -0.31
HERC1-204ENST00000559715 PSRC1Q6PGN9 363 aaPredicted RBP13.13□□□□□ -0.31
HERC1-204ENST00000559715 TMEM47Q9BQJ4 181 aa13.13□□□□□ -0.31
HERC1-204ENST00000559715 HIPK3Q9H422 1215 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms