RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 IFNL1Q8IU54 200 aa18.19■□□□□ 0.5
CDC42BPB-204ENST00000559043 CCDC39Q9UFE4 941 aa18.19■□□□□ 0.5
CDC42BPB-204ENST00000559043 RCOR1Q9UKL0 485 aa18.19■□□□□ 0.5
CDC42BPB-204ENST00000559043 VWA5AO00534 786 aa18.19■□□□□ 0.5
CDC42BPB-204ENST00000559043 CCDC192P0DO97 292 aa18.19■□□□□ 0.5
CDC42BPB-204ENST00000559043 HOMER1Q86YM7 354 aa18.19■□□□□ 0.5
CDC42BPB-204ENST00000559043 RGS22Q8NE09 1264 aa18.19■□□□□ 0.5
CDC42BPB-204ENST00000559043 REPS2Q8NFH8 660 aa18.19■□□□□ 0.5
CDC42BPB-204ENST00000559043 GJB4Q9NTQ9 266 aa18.19■□□□□ 0.5
CDC42BPB-204ENST00000559043 DACT1Q9NYF0 836 aa18.19■□□□□ 0.5
CDC42BPB-204ENST00000559043 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.19■□□□□ 0.5
CDC42BPB-204ENST00000559043 ZNF536O15090 1300 aa18.18■□□□□ 0.5
CDC42BPB-204ENST00000559043 SSRP1Q08945 709 aaKnown RBP18.18■□□□□ 0.5
CDC42BPB-204ENST00000559043 QRICH1Q2TAL8 776 aa18.18■□□□□ 0.5
CDC42BPB-204ENST00000559043 RNF26Q9BY78 433 aaPredicted RBP18.18■□□□□ 0.5
CDC42BPB-204ENST00000559043 RANBP17Q9H2T7 1088 aaKnown RBP18.18■□□□□ 0.5
CDC42BPB-204ENST00000559043 SLC38A10Q9HBR0 1119 aa18.18■□□□□ 0.5
CDC42BPB-204ENST00000559043 HOXC10Q9NYD6 342 aa18.18■□□□□ 0.5
CDC42BPB-204ENST00000559043 ORC3Q9UBD5 711 aaPredicted RBP18.18■□□□□ 0.5
CDC42BPB-204ENST00000559043 MSNP26038 577 aaKnown RBP18.17■□□□□ 0.5
CDC42BPB-204ENST00000559043 INHBEP58166 350 aa18.17■□□□□ 0.5
CDC42BPB-204ENST00000559043 HERVK_113P62684 666 aa18.17■□□□□ 0.5
CDC42BPB-204ENST00000559043 CDC37Q16543 378 aaPredicted RBP18.17■□□□□ 0.5
CDC42BPB-204ENST00000559043 CLSTN2Q9H4D0 955 aa18.17■□□□□ 0.5
CDC42BPB-204ENST00000559043 TXNRD2Q9NNW7 524 aa18.17■□□□□ 0.5
CDC42BPB-204ENST00000559043 BTBD7Q9P203 1132 aa18.17■□□□□ 0.5
CDC42BPB-204ENST00000559043 RBPJLQ9UBG7 517 aa18.17■□□□□ 0.5
CDC42BPB-204ENST00000559043 SLC45A1Q9Y2W3 748 aa18.17■□□□□ 0.5
CDC42BPB-204ENST00000559043 IRX3P78415 501 aaPredicted RBP18.17■□□□□ 0.5
CDC42BPB-204ENST00000559043 TYW1BQ6NUM6 668 aa18.17■□□□□ 0.5
CDC42BPB-204ENST00000559043 CCDC174Q6PII3 467 aa18.17■□□□□ 0.5
CDC42BPB-204ENST00000559043 CPLX2Q6PUV4 134 aaKnown RBP18.17■□□□□ 0.5
CDC42BPB-204ENST00000559043 ZNF396Q96N95 335 aaPredicted RBP18.17■□□□□ 0.5
CDC42BPB-204ENST00000559043 R3HDMLQ9H3Y0 253 aa18.17■□□□□ 0.5
CDC42BPB-204ENST00000559043 ZBTB5O15062 677 aa18.16■□□□□ 0.5
CDC42BPB-204ENST00000559043 CNMDO75829 334 aa18.16■□□□□ 0.5
CDC42BPB-204ENST00000559043 TMEM132BQ14DG7 1078 aa18.16■□□□□ 0.5
CDC42BPB-204ENST00000559043 LBX2Q6XYB7 198 aa18.16■□□□□ 0.5
CDC42BPB-204ENST00000559043 GPKOWQ92917 476 aaPredicted RBP eCLIP18.16■□□□□ 0.5
CDC42BPB-204ENST00000559043 RRP36Q96EU6 259 aaKnown RBP18.16■□□□□ 0.5
CDC42BPB-204ENST00000559043 AGBL1Q96MI9 1066 aa18.16■□□□□ 0.5
CDC42BPB-204ENST00000559043 TNMDQ9H2S6 317 aa18.16■□□□□ 0.5
CDC42BPB-204ENST00000559043 ZKSCAN5Q9Y2L8 839 aa18.16■□□□□ 0.5
CDC42BPB-204ENST00000559043 COL11A1P12107 1806 aaPredicted RBP18.16■□□□□ 0.5
CDC42BPB-204ENST00000559043 PNMA6FA0A0J9YX94 578 aa18.15■□□□□ 0.5
CDC42BPB-204ENST00000559043 NR1I2O75469 434 aa18.15■□□□□ 0.5
CDC42BPB-204ENST00000559043 CDKL5O76039 1030 aa18.15■□□□□ 0.5
CDC42BPB-204ENST00000559043 OSBPP22059 807 aa18.15■□□□□ 0.5
CDC42BPB-204ENST00000559043 PABPC4Q13310 644 aaKnown RBP eCLIP18.15■□□□□ 0.5
CDC42BPB-204ENST00000559043 PFKFB3Q16875 520 aaPredicted RBP18.15■□□□□ 0.5
CDC42BPB-204ENST00000559043 Q3C1V9 767 aa18.15■□□□□ 0.5
CDC42BPB-204ENST00000559043 CPXCR1Q8N123 301 aa18.15■□□□□ 0.5
CDC42BPB-204ENST00000559043 COA7Q96BR5 231 aa18.15■□□□□ 0.5
CDC42BPB-204ENST00000559043 RAVER2Q9HCJ3 691 aaKnown RBP18.15■□□□□ 0.5
CDC42BPB-204ENST00000559043 USP25Q9UHP3 1055 aa18.15■□□□□ 0.5
CDC42BPB-204ENST00000559043 ZNF214Q9UL59 606 aaPredicted RBP18.15■□□□□ 0.5
CDC42BPB-204ENST00000559043 MYPNQ86TC9 1320 aa18.15■□□□□ 0.5
CDC42BPB-204ENST00000559043 ADAMTS3O15072 1205 aa18.15■□□□□ 0.5
CDC42BPB-204ENST00000559043 ZNF500O60304 480 aaPredicted RBP18.15■□□□□ 0.5
CDC42BPB-204ENST00000559043 FOSBP53539 338 aa18.15■□□□□ 0.5
CDC42BPB-204ENST00000559043 SREBF2Q12772 1141 aa18.15■□□□□ 0.5
CDC42BPB-204ENST00000559043 BICD2Q8TD16 824 aa18.15■□□□□ 0.5
CDC42BPB-204ENST00000559043 USP28Q96RU2 1077 aa18.15■□□□□ 0.5
CDC42BPB-204ENST00000559043 RIPK3Q9Y572 518 aa18.15■□□□□ 0.5
CDC42BPB-204ENST00000559043 STK36Q9NRP7 1315 aa18.15■□□□□ 0.5
CDC42BPB-204ENST00000559043 DEXIO95424 95 aa18.14■□□□□ 0.49
CDC42BPB-204ENST00000559043 SCG2P13521 617 aa18.14■□□□□ 0.49
CDC42BPB-204ENST00000559043 MAP2K2P36507 400 aa18.14■□□□□ 0.49
CDC42BPB-204ENST00000559043 CAMK4Q16566 473 aa18.14■□□□□ 0.49
CDC42BPB-204ENST00000559043 WWC2Q6AWC2 1192 aa18.14■□□□□ 0.49
CDC42BPB-204ENST00000559043 OTUD7BQ6GQQ9 843 aa18.14■□□□□ 0.49
CDC42BPB-204ENST00000559043 TRIM22Q8IYM9 498 aa18.14■□□□□ 0.49
CDC42BPB-204ENST00000559043 DNAJC5GQ8N7S2 189 aa18.14■□□□□ 0.49
CDC42BPB-204ENST00000559043 FBXO18Q8NFZ0 1043 aa18.14■□□□□ 0.49
CDC42BPB-204ENST00000559043 MYH6P13533 1939 aa18.14■□□□□ 0.49
CDC42BPB-204ENST00000559043 GUCY1B3Q02153 619 aa18.13■□□□□ 0.49
CDC42BPB-204ENST00000559043 TYRO3Q06418 890 aa18.13■□□□□ 0.49
CDC42BPB-204ENST00000559043 C8orf76Q96K31 380 aa18.13■□□□□ 0.49
CDC42BPB-204ENST00000559043 MRVI1Q9Y6F6 885 aa18.13■□□□□ 0.49
CDC42BPB-204ENST00000559043 ZBED4O75132 1171 aa18.13■□□□□ 0.49
CDC42BPB-204ENST00000559043 ADCY5O95622 1261 aa18.13■□□□□ 0.49
CDC42BPB-204ENST00000559043 USH1GQ495M9 461 aa18.13■□□□□ 0.49
CDC42BPB-204ENST00000559043 PAGR1Q9BTK6 254 aa18.13■□□□□ 0.49
CDC42BPB-204ENST00000559043 VPS54Q9P1Q0 977 aa18.13■□□□□ 0.49
CDC42BPB-204ENST00000559043 ADGRA2Q96PE1 1338 aa18.13■□□□□ 0.49
CDC42BPB-204ENST00000559043 STXBP3O00186 592 aa18.12■□□□□ 0.49
CDC42BPB-204ENST00000559043 AKAP17AQ02040 695 aaKnown RBP18.12■□□□□ 0.49
CDC42BPB-204ENST00000559043 TAF1CQ15572 869 aaPredicted RBP18.12■□□□□ 0.49
CDC42BPB-204ENST00000559043 HEATR3Q7Z4Q2 680 aa18.12■□□□□ 0.49
CDC42BPB-204ENST00000559043 FAM200AQ8TCP9 573 aa18.12■□□□□ 0.49
CDC42BPB-204ENST00000559043 ALG1Q9BT22 464 aa18.12■□□□□ 0.49
CDC42BPB-204ENST00000559043 FTOQ9C0B1 505 aaKnown RBP eCLIP18.12■□□□□ 0.49
CDC42BPB-204ENST00000559043 ZCCHC17Q9NP64 241 aaKnown RBP18.12■□□□□ 0.49
CDC42BPB-204ENST00000559043 RTEL1Q9NZ71 1219 aa18.12■□□□□ 0.49
CDC42BPB-204ENST00000559043 PNMA3Q9UL41 463 aa18.12■□□□□ 0.49
CDC42BPB-204ENST00000559043 PCDHA1Q9Y5I3 950 aa18.12■□□□□ 0.49
CDC42BPB-204ENST00000559043 A0A0G2JMZ2 1700 aa18.12■□□□□ 0.49
CDC42BPB-204ENST00000559043 OPLAHO14841 1288 aa18.11■□□□□ 0.49
CDC42BPB-204ENST00000559043 ICAM1P05362 532 aa18.11■□□□□ 0.49
CDC42BPB-204ENST00000559043 CEBPZQ03701 1054 aaKnown RBP18.11■□□□□ 0.49
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