RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 LRRC56Q8IYG6 542 aaPredicted RBP9.37□□□□□ -0.91
SPG11-213ENST00000558988 FAM9BQ8IZU0 186 aa9.37□□□□□ -0.91
SPG11-213ENST00000558988 PI4KAP1Q8N8J0 262 aa9.37□□□□□ -0.91
SPG11-213ENST00000558988 POP1Q99575 1024 aaKnown RBP9.37□□□□□ -0.91
SPG11-213ENST00000558988 RC3H2Q9HBD1 1191 aaKnown RBP9.37□□□□□ -0.91
SPG11-213ENST00000558988 ADARB2Q9NS39 739 aaKnown RBP9.37□□□□□ -0.91
SPG11-213ENST00000558988 LRFN2Q9ULH4 789 aa9.37□□□□□ -0.91
SPG11-213ENST00000558988 DUOX1Q9NRD9 1551 aa9.37□□□□□ -0.91
SPG11-213ENST00000558988 ATP9BO43861 1147 aa9.36□□□□□ -0.91
SPG11-213ENST00000558988 ECE2O60344 883 aa9.36□□□□□ -0.91
SPG11-213ENST00000558988 PDE8AO60658 829 aa9.36□□□□□ -0.91
SPG11-213ENST00000558988 PCCAP05165 728 aaPredicted RBP9.36□□□□□ -0.91
SPG11-213ENST00000558988 DEFB115Q30KQ5 88 aa9.36□□□□□ -0.91
SPG11-213ENST00000558988 CCDC152Q4G0S7 254 aa9.36□□□□□ -0.91
SPG11-213ENST00000558988 KSR2Q6VAB6 950 aa9.36□□□□□ -0.91
SPG11-213ENST00000558988 USP50Q70EL3 339 aaPredicted RBP9.36□□□□□ -0.91
SPG11-213ENST00000558988 SIAH1Q8IUQ4 282 aa9.36□□□□□ -0.91
SPG11-213ENST00000558988 CCDC191Q8NCU4 936 aa9.36□□□□□ -0.91
SPG11-213ENST00000558988 SMG8Q8ND04 991 aaKnown RBP9.36□□□□□ -0.91
SPG11-213ENST00000558988 SLC7A3Q8WY07 619 aa9.36□□□□□ -0.91
SPG11-213ENST00000558988 EYA3Q99504 573 aa9.36□□□□□ -0.91
SPG11-213ENST00000558988 TMPRSS13Q9BYE2 586 aa9.36□□□□□ -0.91
SPG11-213ENST00000558988 VPS33BQ9H267 617 aa9.36□□□□□ -0.91
SPG11-213ENST00000558988 POLLQ9UGP5 575 aa9.36□□□□□ -0.91
SPG11-213ENST00000558988 CNOT7Q9UIV1 285 aaKnown RBP9.36□□□□□ -0.91
SPG11-213ENST00000558988 LRRC37AA6NMS7 1700 aa9.36□□□□□ -0.91
SPG11-213ENST00000558988 FANCIQ9NVI1 1328 aa9.35□□□□□ -0.91
SPG11-213ENST00000558988 H7C1D1 291 aa9.35□□□□□ -0.91
SPG11-213ENST00000558988 PSMD14O00487 310 aa9.35□□□□□ -0.91
SPG11-213ENST00000558988 DRD2P14416 443 aa9.35□□□□□ -0.91
SPG11-213ENST00000558988 HSP90B1P14625 803 aaKnown RBP9.35□□□□□ -0.91
SPG11-213ENST00000558988 SCNN1AP37088 669 aa9.35□□□□□ -0.91
SPG11-213ENST00000558988 FKBP5Q13451 457 aaPredicted RBP9.35□□□□□ -0.91
SPG11-213ENST00000558988 TBC1D10BQ4KMP7 808 aaPredicted RBP9.35□□□□□ -0.91
SPG11-213ENST00000558988 UBE3BQ7Z3V4 1068 aa9.35□□□□□ -0.91
SPG11-213ENST00000558988 ANKRD18AQ8IVF6 992 aa9.35□□□□□ -0.91
SPG11-213ENST00000558988 TBC1D16Q8TBP0 767 aa9.35□□□□□ -0.91
SPG11-213ENST00000558988 UCN2Q96RP3 112 aa9.35□□□□□ -0.91
SPG11-213ENST00000558988 CHMP4AQ9BY43 222 aa9.35□□□□□ -0.91
SPG11-213ENST00000558988 GLIS2Q9BZE0 524 aaPredicted RBP9.35□□□□□ -0.91
SPG11-213ENST00000558988 ZC3H12CQ9C0D7 883 aaKnown RBP9.35□□□□□ -0.91
SPG11-213ENST00000558988 KCNQ5Q9NR82 932 aa9.35□□□□□ -0.91
SPG11-213ENST00000558988 SPEF2Q9C093 1822 aa9.34□□□□□ -0.91
SPG11-213ENST00000558988 LRRC10BA6NIK2 292 aa9.34□□□□□ -0.91
SPG11-213ENST00000558988 FOXN1O15353 648 aa9.34□□□□□ -0.91
SPG11-213ENST00000558988 CELF2O95319 508 aaKnown RBP9.34□□□□□ -0.91
SPG11-213ENST00000558988 IGKV5-2P06315 115 aa9.34□□□□□ -0.91
SPG11-213ENST00000558988 ZSCAN22P10073 491 aaPredicted RBP9.34□□□□□ -0.91
SPG11-213ENST00000558988 CTSWP56202 376 aa9.34□□□□□ -0.91
SPG11-213ENST00000558988 BNIP3Q12983 259 aa9.34□□□□□ -0.91
SPG11-213ENST00000558988 ECM1Q16610 540 aa9.34□□□□□ -0.91
SPG11-213ENST00000558988 CCDC27Q2M243 656 aa9.34□□□□□ -0.91
SPG11-213ENST00000558988 DLK2Q6UY11 383 aa9.34□□□□□ -0.91
SPG11-213ENST00000558988 RNASE1P07998 156 aaKnown RBP9.33□□□□□ -0.92
SPG11-213ENST00000558988 EXOSC9Q06265 439 aaKnown RBP9.33□□□□□ -0.92
SPG11-213ENST00000558988 FLIIQ13045 1269 aa9.33□□□□□ -0.92
SPG11-213ENST00000558988 HGSNATQ68CP4 663 aa9.33□□□□□ -0.92
SPG11-213ENST00000558988 CYP4F22Q6NT55 531 aa9.33□□□□□ -0.92
SPG11-213ENST00000558988 ZNF765Q7L2R6 523 aa9.33□□□□□ -0.92
SPG11-213ENST00000558988 USP48Q86UV5 1035 aa9.33□□□□□ -0.92
SPG11-213ENST00000558988 CAPNS2Q96L46 248 aa9.33□□□□□ -0.92
SPG11-213ENST00000558988 GREM2Q9H772 168 aa9.33□□□□□ -0.92
SPG11-213ENST00000558988 SUGCTQ9HAC7 445 aa9.33□□□□□ -0.92
SPG11-213ENST00000558988 CYP4F12Q9HCS2 524 aa9.33□□□□□ -0.92
SPG11-213ENST00000558988 MBNL3Q9NUK0 354 aaKnown RBP9.33□□□□□ -0.92
SPG11-213ENST00000558988 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.33□□□□□ -0.92
SPG11-213ENST00000558988 RTL9Q8NET4 1388 aa9.33□□□□□ -0.92
SPG11-213ENST00000558988 WDR33Q9C0J8 1336 aaKnown RBP9.32□□□□□ -0.92
SPG11-213ENST00000558988 WTIPA6NIX2 430 aaPredicted RBP9.32□□□□□ -0.92
SPG11-213ENST00000558988 KIF4AO95239 1232 aa9.32□□□□□ -0.92
SPG11-213ENST00000558988 CST9Q5W186 159 aa9.32□□□□□ -0.92
SPG11-213ENST00000558988 STK11IPQ8N1F8 1099 aa9.32□□□□□ -0.92
SPG11-213ENST00000558988 ADAMTS19Q8TE59 1207 aa9.32□□□□□ -0.92
SPG11-213ENST00000558988 EZH1Q92800 747 aaPredicted RBP9.32□□□□□ -0.92
SPG11-213ENST00000558988 CDC5LQ99459 802 aaKnown RBP9.32□□□□□ -0.92
SPG11-213ENST00000558988 RAPGEFL1Q9UHV5 662 aa9.32□□□□□ -0.92
SPG11-213ENST00000558988 ADAMTS6Q9UKP5 1117 aa9.32□□□□□ -0.92
SPG11-213ENST00000558988 COG6Q9Y2V7 657 aa9.32□□□□□ -0.92
SPG11-213ENST00000558988 TRPM7Q96QT4 1865 aa9.32□□□□□ -0.92
SPG11-213ENST00000558988 XDHP47989 1333 aa9.31□□□□□ -0.92
SPG11-213ENST00000558988 IL16Q14005 1332 aa9.31□□□□□ -0.92
SPG11-213ENST00000558988 CDHR2Q9BYE9 1310 aa9.31□□□□□ -0.92
SPG11-213ENST00000558988 RASSF10A6NK89 507 aa9.31□□□□□ -0.92
SPG11-213ENST00000558988 ADM5C9JUS6 153 aa9.31□□□□□ -0.92
SPG11-213ENST00000558988 F6X3S4 739 aa9.31□□□□□ -0.92
SPG11-213ENST00000558988 AOC2O75106 756 aa9.31□□□□□ -0.92
SPG11-213ENST00000558988 CTCFP49711 727 aaPredicted RBP9.31□□□□□ -0.92
SPG11-213ENST00000558988 LBX1P52954 281 aa9.31□□□□□ -0.92
SPG11-213ENST00000558988 KIF4BQ2VIQ3 1234 aa9.31□□□□□ -0.92
SPG11-213ENST00000558988 KRT26Q7Z3Y9 468 aa9.31□□□□□ -0.92
SPG11-213ENST00000558988 CEP120Q8N960 986 aa9.31□□□□□ -0.92
SPG11-213ENST00000558988 TTLL11Q8NHH1 800 aa9.31□□□□□ -0.92
SPG11-213ENST00000558988 DNAAF4Q8WXU2 420 aa9.31□□□□□ -0.92
SPG11-213ENST00000558988 VTI1AQ96AJ9 217 aa9.31□□□□□ -0.92
SPG11-213ENST00000558988 MYH3P11055 1940 aa9.31□□□□□ -0.92
SPG11-213ENST00000558988 ASTN2O75129 1339 aaPredicted RBP9.31□□□□□ -0.92
SPG11-213ENST00000558988 SCN9AQ15858 1988 aa9.3□□□□□ -0.92
SPG11-213ENST00000558988 VAMP4O75379 141 aa9.3□□□□□ -0.92
SPG11-213ENST00000558988 FUT4P22083 530 aa9.3□□□□□ -0.92
SPG11-213ENST00000558988 ATP2B4P23634 1241 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms