RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 PNMA6FA0A0J9YX94 578 aa14.37□□□□□ -0.11
GABPB1-208ENST00000558970 PTPDC1A2A3K4 754 aa14.37□□□□□ -0.11
GABPB1-208ENST00000558970 TNPO2O14787 897 aaKnown RBP14.37□□□□□ -0.11
GABPB1-208ENST00000558970 CTDNEP1O95476 244 aa14.37□□□□□ -0.11
GABPB1-208ENST00000558970 FDX1P10109 184 aa14.37□□□□□ -0.11
GABPB1-208ENST00000558970 PPP2R5BQ15173 497 aa14.37□□□□□ -0.11
GABPB1-208ENST00000558970 NSMFQ6X4W1 530 aa14.37□□□□□ -0.11
GABPB1-208ENST00000558970 RIOX2Q8IUF8 465 aa14.37□□□□□ -0.11
GABPB1-208ENST00000558970 HSCBQ8IWL3 235 aa14.37□□□□□ -0.11
GABPB1-208ENST00000558970 TRIM22Q8IYM9 498 aa14.37□□□□□ -0.11
GABPB1-208ENST00000558970 MTMR8Q96EF0 704 aa14.37□□□□□ -0.11
GABPB1-208ENST00000558970 AMNQ9BXJ7 453 aa14.37□□□□□ -0.11
GABPB1-208ENST00000558970 PCDHA1Q9Y5I3 950 aa14.37□□□□□ -0.11
GABPB1-208ENST00000558970 PDE4DIPQ5VU43 2346 aa14.36□□□□□ -0.11
GABPB1-208ENST00000558970 NFIBO00712 420 aa14.36□□□□□ -0.11
GABPB1-208ENST00000558970 CDKL5O76039 1030 aa14.36□□□□□ -0.11
GABPB1-208ENST00000558970 IFNAR1P17181 557 aa14.36□□□□□ -0.11
GABPB1-208ENST00000558970 MCM2P49736 904 aa14.36□□□□□ -0.11
GABPB1-208ENST00000558970 OAZ1P54368 228 aa14.36□□□□□ -0.11
GABPB1-208ENST00000558970 WWC2Q6AWC2 1192 aa14.36□□□□□ -0.11
GABPB1-208ENST00000558970 GPR142Q7Z601 462 aa14.36□□□□□ -0.11
GABPB1-208ENST00000558970 SPRYD3Q8NCJ5 442 aa14.36□□□□□ -0.11
GABPB1-208ENST00000558970 NSUN7Q8NE18 718 aaKnown RBP14.36□□□□□ -0.11
GABPB1-208ENST00000558970 TRIM47Q96LD4 638 aa14.36□□□□□ -0.11
GABPB1-208ENST00000558970 AIFM3Q96NN9 605 aa14.36□□□□□ -0.11
GABPB1-208ENST00000558970 IVNS1ABPQ9Y6Y0 642 aa14.36□□□□□ -0.11
GABPB1-208ENST00000558970 K7ELQ4 463 aaPredicted RBP14.35□□□□□ -0.11
GABPB1-208ENST00000558970 ATP2A1O14983 1001 aa14.35□□□□□ -0.11
GABPB1-208ENST00000558970 PRPF3O43395 683 aaKnown RBP14.35□□□□□ -0.11
GABPB1-208ENST00000558970 SLC25A27O95847 323 aa14.35□□□□□ -0.11
GABPB1-208ENST00000558970 SMARCA1P28370 1054 aa14.35□□□□□ -0.11
GABPB1-208ENST00000558970 MAPK4P31152 587 aa14.35□□□□□ -0.11
GABPB1-208ENST00000558970 NAPAP54920 295 aa14.35□□□□□ -0.11
GABPB1-208ENST00000558970 FCGRTP55899 365 aa14.35□□□□□ -0.11
GABPB1-208ENST00000558970 PLEKHH3Q7Z736 793 aa14.35□□□□□ -0.11
GABPB1-208ENST00000558970 ANKRD35Q8N283 1001 aa14.35□□□□□ -0.11
GABPB1-208ENST00000558970 ERO1AQ96HE7 468 aa14.35□□□□□ -0.11
GABPB1-208ENST00000558970 MMP19Q99542 508 aa14.35□□□□□ -0.11
GABPB1-208ENST00000558970 RNF26Q9BY78 433 aaPredicted RBP14.35□□□□□ -0.11
GABPB1-208ENST00000558970 ACAD9Q9H845 621 aa14.35□□□□□ -0.11
GABPB1-208ENST00000558970 ORC3Q9UBD5 711 aaPredicted RBP14.35□□□□□ -0.11
GABPB1-208ENST00000558970 ZNF236Q9UL36 1845 aa14.35□□□□□ -0.11
GABPB1-208ENST00000558970 ABCB11O95342 1321 aa14.35□□□□□ -0.11
GABPB1-208ENST00000558970 MCM3APO60318 1980 aa14.34□□□□□ -0.11
GABPB1-208ENST00000558970 CFBP00751 764 aa14.34□□□□□ -0.11
GABPB1-208ENST00000558970 PGK2P07205 417 aa14.34□□□□□ -0.11
GABPB1-208ENST00000558970 SCG2P13521 617 aa14.34□□□□□ -0.11
GABPB1-208ENST00000558970 PKN1Q16512 942 aa14.34□□□□□ -0.11
GABPB1-208ENST00000558970 PFKFB3Q16875 520 aaPredicted RBP14.34□□□□□ -0.11
GABPB1-208ENST00000558970 TBC1D5Q92609 795 aa14.34□□□□□ -0.11
GABPB1-208ENST00000558970 MROH8Q9H579 483 aa14.34□□□□□ -0.11
GABPB1-208ENST00000558970 VPS54Q9P1Q0 977 aa14.34□□□□□ -0.11
GABPB1-208ENST00000558970 GABRQQ9UN88 632 aa14.34□□□□□ -0.11
GABPB1-208ENST00000558970 TRIM17Q9Y577 477 aa14.34□□□□□ -0.11
GABPB1-208ENST00000558970 STXBP3O00186 592 aa14.33□□□□□ -0.12
GABPB1-208ENST00000558970 DEXIO95424 95 aa14.33□□□□□ -0.12
GABPB1-208ENST00000558970 FCER1AP12319 257 aa14.33□□□□□ -0.12
GABPB1-208ENST00000558970 CALML3P27482 149 aa14.33□□□□□ -0.12
GABPB1-208ENST00000558970 HOXA13P31271 388 aaPredicted RBP14.33□□□□□ -0.12
GABPB1-208ENST00000558970 KCTD2Q14681 263 aa14.33□□□□□ -0.12
GABPB1-208ENST00000558970 TYW1BQ6NUM6 668 aa14.33□□□□□ -0.12
GABPB1-208ENST00000558970 SLC30A10Q6XR72 485 aa14.33□□□□□ -0.12
GABPB1-208ENST00000558970 SHCBP1Q8NEM2 672 aa14.33□□□□□ -0.12
GABPB1-208ENST00000558970 CHST13Q8NET6 341 aa14.33□□□□□ -0.12
GABPB1-208ENST00000558970 CLEC4DQ8WXI8 215 aa14.33□□□□□ -0.12
GABPB1-208ENST00000558970 PURBQ96QR8 312 aaKnown RBP14.33□□□□□ -0.12
GABPB1-208ENST00000558970 A1CFQ9NQ94 594 aaKnown RBP14.33□□□□□ -0.12
GABPB1-208ENST00000558970 GJB4Q9NTQ9 266 aa14.33□□□□□ -0.12
GABPB1-208ENST00000558970 MRPL11Q9Y3B7 192 aaKnown RBP14.33□□□□□ -0.12
GABPB1-208ENST00000558970 HSP90AA1P07900 732 aaKnown RBP14.32□□□□□ -0.12
GABPB1-208ENST00000558970 FDPSP14324 419 aaKnown RBP14.32□□□□□ -0.12
GABPB1-208ENST00000558970 CYP2B6P20813 491 aa14.32□□□□□ -0.12
GABPB1-208ENST00000558970 PTPREP23469 700 aa14.32□□□□□ -0.12
GABPB1-208ENST00000558970 ADORA2AP29274 412 aa14.32□□□□□ -0.12
GABPB1-208ENST00000558970 COPB2P35606 906 aa14.32□□□□□ -0.12
GABPB1-208ENST00000558970 PRKCZQ05513 592 aa14.32□□□□□ -0.12
GABPB1-208ENST00000558970 UBE2SQ16763 222 aa14.32□□□□□ -0.12
GABPB1-208ENST00000558970 TKFCQ3LXA3 575 aa14.32□□□□□ -0.12
GABPB1-208ENST00000558970 SNX21Q969T3 373 aa14.32□□□□□ -0.12
GABPB1-208ENST00000558970 ALG1Q9BT22 464 aa14.32□□□□□ -0.12
GABPB1-208ENST00000558970 RBM27Q9P2N5 1060 aaKnown RBP14.32□□□□□ -0.12
GABPB1-208ENST00000558970 FBXO40Q9UH90 709 aa14.32□□□□□ -0.12
GABPB1-208ENST00000558970 STK36Q9NRP7 1315 aa14.32□□□□□ -0.12
GABPB1-208ENST00000558970 LRRC37A2A6NM11 1700 aa14.32□□□□□ -0.12
GABPB1-208ENST00000558970 OPLAHO14841 1288 aa14.31□□□□□ -0.12
GABPB1-208ENST00000558970 GUCY1B3Q02153 619 aa14.31□□□□□ -0.12
GABPB1-208ENST00000558970 BAATQ14032 418 aaPredicted RBP14.31□□□□□ -0.12
GABPB1-208ENST00000558970 RNF207Q6ZRF8 634 aa14.31□□□□□ -0.12
GABPB1-208ENST00000558970 OTOP1Q7RTM1 612 aa14.31□□□□□ -0.12
GABPB1-208ENST00000558970 DPP9Q86TI2 863 aa14.31□□□□□ -0.12
GABPB1-208ENST00000558970 FAM184AQ8NB25 1140 aa14.31□□□□□ -0.12
GABPB1-208ENST00000558970 IL27Q8NEV9 243 aa14.31□□□□□ -0.12
GABPB1-208ENST00000558970 SHISA4Q96DD7 197 aa14.31□□□□□ -0.12
GABPB1-208ENST00000558970 BARHL2Q9NY43 387 aa14.31□□□□□ -0.12
GABPB1-208ENST00000558970 KCNJ14Q9UNX9 436 aa14.31□□□□□ -0.12
GABPB1-208ENST00000558970 SMC3Q9UQE7 1217 aa14.31□□□□□ -0.12
GABPB1-208ENST00000558970 DDX49Q9Y6V7 483 aaKnown RBP14.31□□□□□ -0.12
GABPB1-208ENST00000558970 SMCO2A6NFE2 343 aa14.3□□□□□ -0.12
GABPB1-208ENST00000558970 ADAMTS3O15072 1205 aa14.3□□□□□ -0.12
GABPB1-208ENST00000558970 GJB2P29033 226 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms