RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 SDSP20132 328 aa7.16□□□□□ -1.26
CTDSPL2-204ENST00000558966 HOXD10P28358 340 aa7.16□□□□□ -1.26
CTDSPL2-204ENST00000558966 PPARAQ07869 468 aa7.16□□□□□ -1.26
CTDSPL2-204ENST00000558966 MCMDC2Q4G0Z9 681 aa7.16□□□□□ -1.26
CTDSPL2-204ENST00000558966 POTEGQ6S5H5 508 aa7.16□□□□□ -1.26
CTDSPL2-204ENST00000558966 ZBTB33Q86T24 672 aa7.16□□□□□ -1.26
CTDSPL2-204ENST00000558966 SPICE1Q8N0Z3 855 aa7.16□□□□□ -1.26
CTDSPL2-204ENST00000558966 PAGR1Q9BTK6 254 aa7.16□□□□□ -1.26
CTDSPL2-204ENST00000558966 VCPKMTQ9H867 229 aa7.16□□□□□ -1.26
CTDSPL2-204ENST00000558966 KANSL2Q9H9L4 492 aa7.16□□□□□ -1.26
CTDSPL2-204ENST00000558966 MKNK2Q9HBH9 465 aa7.16□□□□□ -1.26
CTDSPL2-204ENST00000558966 ARHGEF10LQ9HCE6 1279 aa7.16□□□□□ -1.26
CTDSPL2-204ENST00000558966 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.16□□□□□ -1.26
CTDSPL2-204ENST00000558966 FCF1Q9Y324 198 aaKnown RBP7.16□□□□□ -1.26
CTDSPL2-204ENST00000558966 LAMA4Q16363 1823 aa7.15□□□□□ -1.26
CTDSPL2-204ENST00000558966 HSPD1P10809 573 aaKnown RBP7.15□□□□□ -1.26
CTDSPL2-204ENST00000558966 FLT3LGP49771 235 aa7.15□□□□□ -1.26
CTDSPL2-204ENST00000558966 ERVK-9P63128 1117 aa7.15□□□□□ -1.26
CTDSPL2-204ENST00000558966 ERVK-24P63145 666 aa7.15□□□□□ -1.26
CTDSPL2-204ENST00000558966 ALX1Q15699 326 aa7.15□□□□□ -1.26
CTDSPL2-204ENST00000558966 TTC22Q5TAA0 569 aa7.15□□□□□ -1.26
CTDSPL2-204ENST00000558966 LBX2Q6XYB7 198 aa7.15□□□□□ -1.26
CTDSPL2-204ENST00000558966 RNF135Q8IUD6 432 aa7.15□□□□□ -1.26
CTDSPL2-204ENST00000558966 GPRC5AQ8NFJ5 357 aa7.15□□□□□ -1.26
CTDSPL2-204ENST00000558966 RAET1EQ8TD07 263 aa7.15□□□□□ -1.26
CTDSPL2-204ENST00000558966 GTF3C2Q8WUA4 911 aaPredicted RBP7.15□□□□□ -1.26
CTDSPL2-204ENST00000558966 BAP1Q92560 729 aa7.15□□□□□ -1.26
CTDSPL2-204ENST00000558966 LPAR1Q92633 364 aa7.15□□□□□ -1.26
CTDSPL2-204ENST00000558966 PORCNQ9H237 461 aa7.15□□□□□ -1.26
CTDSPL2-204ENST00000558966 SH2D4AQ9H788 454 aa7.15□□□□□ -1.26
CTDSPL2-204ENST00000558966 BTBD7Q9P203 1132 aa7.15□□□□□ -1.26
CTDSPL2-204ENST00000558966 ANAPC4Q9UJX5 808 aa7.15□□□□□ -1.26
CTDSPL2-204ENST00000558966 USTQ9Y2C2 406 aa7.15□□□□□ -1.26
CTDSPL2-204ENST00000558966 CCDC171Q6TFL3 1326 aa7.15□□□□□ -1.26
CTDSPL2-204ENST00000558966 COL11A1P12107 1806 aaPredicted RBP7.15□□□□□ -1.26
CTDSPL2-204ENST00000558966 FGAP02671 866 aa7.15□□□□□ -1.27
CTDSPL2-204ENST00000558966 GRK4P32298 578 aa7.15□□□□□ -1.27
CTDSPL2-204ENST00000558966 ATP2B2Q01814 1243 aa7.15□□□□□ -1.27
CTDSPL2-204ENST00000558966 PDE4CQ08493 712 aa7.15□□□□□ -1.27
CTDSPL2-204ENST00000558966 FAM47AQ5JRC9 791 aa7.15□□□□□ -1.27
CTDSPL2-204ENST00000558966 COA7Q96BR5 231 aa7.15□□□□□ -1.27
CTDSPL2-204ENST00000558966 TANGO6Q9C0B7 1094 aa7.15□□□□□ -1.27
CTDSPL2-204ENST00000558966 IL25Q9H293 177 aa7.15□□□□□ -1.27
CTDSPL2-204ENST00000558966 INCENPQ9NQS7 918 aa7.15□□□□□ -1.27
CTDSPL2-204ENST00000558966 NYAP2Q9P242 653 aa7.15□□□□□ -1.27
CTDSPL2-204ENST00000558966 GJD2Q9UKL4 321 aa7.15□□□□□ -1.27
CTDSPL2-204ENST00000558966 RABGAP1Q9Y3P9 1069 aa7.15□□□□□ -1.27
CTDSPL2-204ENST00000558966 ZMYM6O95789 1325 aa7.15□□□□□ -1.27
CTDSPL2-204ENST00000558966 WDR46O15213 610 aaKnown RBP7.14□□□□□ -1.27
CTDSPL2-204ENST00000558966 ADCY3O60266 1144 aa7.14□□□□□ -1.27
CTDSPL2-204ENST00000558966 MYCP01106 439 aaPredicted RBP7.14□□□□□ -1.27
CTDSPL2-204ENST00000558966 ELNP15502 786 aa7.14□□□□□ -1.27
CTDSPL2-204ENST00000558966 MLLT1Q03111 559 aaPredicted RBP7.14□□□□□ -1.27
CTDSPL2-204ENST00000558966 PDE4BQ07343 736 aa7.14□□□□□ -1.27
CTDSPL2-204ENST00000558966 AGERQ15109 404 aa7.14□□□□□ -1.27
CTDSPL2-204ENST00000558966 MTFR1Q15390 333 aa7.14□□□□□ -1.27
CTDSPL2-204ENST00000558966 CWC27Q6UX04 472 aaKnown RBP7.14□□□□□ -1.27
CTDSPL2-204ENST00000558966 NBPF11Q86T75 865 aa7.14□□□□□ -1.27
CTDSPL2-204ENST00000558966 ZNF444Q8N0Y2 327 aaPredicted RBP7.14□□□□□ -1.27
CTDSPL2-204ENST00000558966 NEDD1Q8NHV4 660 aa7.14□□□□□ -1.27
CTDSPL2-204ENST00000558966 FOXJ1Q92949 421 aa7.14□□□□□ -1.27
CTDSPL2-204ENST00000558966 ATG4CQ96DT6 458 aa7.14□□□□□ -1.27
CTDSPL2-204ENST00000558966 CEP95Q96GE4 821 aa7.14□□□□□ -1.27
CTDSPL2-204ENST00000558966 ZNF287Q9HBT7 754 aa7.14□□□□□ -1.27
CTDSPL2-204ENST00000558966 DIAPH3Q9NSV4 1193 aa7.14□□□□□ -1.27
CTDSPL2-204ENST00000558966 FBXO28Q9NVF7 368 aa7.14□□□□□ -1.27
CTDSPL2-204ENST00000558966 MTMR4Q9NYA4 1195 aa7.14□□□□□ -1.27
CTDSPL2-204ENST00000558966 HIP1O00291 1037 aa7.13□□□□□ -1.27
CTDSPL2-204ENST00000558966 ORC4O43929 436 aa7.13□□□□□ -1.27
CTDSPL2-204ENST00000558966 FLOT1O75955 427 aa7.13□□□□□ -1.27
CTDSPL2-204ENST00000558966 NDUFB10O96000 172 aa7.13□□□□□ -1.27
CTDSPL2-204ENST00000558966 SLC3A2P08195 630 aaKnown RBP7.13□□□□□ -1.27
CTDSPL2-204ENST00000558966 FGRP09769 529 aa7.13□□□□□ -1.27
CTDSPL2-204ENST00000558966 TSPY3P0CV98 308 aa7.13□□□□□ -1.27
CTDSPL2-204ENST00000558966 TSPY8P0CW00 308 aa7.13□□□□□ -1.27
CTDSPL2-204ENST00000558966 MAPK4P31152 587 aa7.13□□□□□ -1.27
CTDSPL2-204ENST00000558966 TFAP4Q01664 338 aa7.13□□□□□ -1.27
CTDSPL2-204ENST00000558966 NCOA4Q13772 614 aa7.13□□□□□ -1.27
CTDSPL2-204ENST00000558966 COG2Q14746 738 aa7.13□□□□□ -1.27
CTDSPL2-204ENST00000558966 TSGA10IPQ3SY00 556 aa7.13□□□□□ -1.27
CTDSPL2-204ENST00000558966 PHTF2Q8N3S3 785 aa7.13□□□□□ -1.27
CTDSPL2-204ENST00000558966 USP6NLQ92738 828 aa7.13□□□□□ -1.27
CTDSPL2-204ENST00000558966 NUP88Q99567 741 aaPredicted RBP7.13□□□□□ -1.27
CTDSPL2-204ENST00000558966 CLIP2Q9UDT6 1046 aa7.13□□□□□ -1.27
CTDSPL2-204ENST00000558966 CEP290O15078 2479 aa7.13□□□□□ -1.27
CTDSPL2-204ENST00000558966 F5H6K3 240 aa7.13□□□□□ -1.27
CTDSPL2-204ENST00000558966 NMT2O60551 498 aa7.13□□□□□ -1.27
CTDSPL2-204ENST00000558966 TTLL1O95922 423 aa7.13□□□□□ -1.27
CTDSPL2-204ENST00000558966 INHAP05111 366 aa7.13□□□□□ -1.27
CTDSPL2-204ENST00000558966 EN2P19622 333 aaPredicted RBP7.13□□□□□ -1.27
CTDSPL2-204ENST00000558966 MFAP1P55081 439 aaKnown RBP7.13□□□□□ -1.27
CTDSPL2-204ENST00000558966 HAND2P61296 217 aa7.13□□□□□ -1.27
CTDSPL2-204ENST00000558966 KLRC3Q07444 240 aa7.13□□□□□ -1.27
CTDSPL2-204ENST00000558966 FAM83BQ5T0W9 1011 aa7.13□□□□□ -1.27
CTDSPL2-204ENST00000558966 GPR142Q7Z601 462 aa7.13□□□□□ -1.27
CTDSPL2-204ENST00000558966 TBC1D10CQ8IV04 446 aa7.13□□□□□ -1.27
CTDSPL2-204ENST00000558966 LRRC47Q8N1G4 583 aaKnown RBP7.13□□□□□ -1.27
CTDSPL2-204ENST00000558966 PLPP7Q8NBV4 271 aa7.13□□□□□ -1.27
CTDSPL2-204ENST00000558966 MKL1Q969V6 931 aa7.13□□□□□ -1.27
CTDSPL2-204ENST00000558966 SPATC1LQ9H0A9 340 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms