RNA–Protein interactions for RNA: ENST00000558911.1

LRRC28-212, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-212ENST00000558911 GPR55Q9Y2T6 319 aaPredicted RBP4.58□□□□□ -1.68
LRRC28-212ENST00000558911 NOP58Q9Y2X3 529 aaKnown RBP4.58□□□□□ -1.68
LRRC28-212ENST00000558911 ZNF281Q9Y2X9 895 aa4.58□□□□□ -1.68
LRRC28-212ENST00000558911 A0A1B0GTL3 188 aa4.57□□□□□ -1.68
LRRC28-212ENST00000558911 DNAJA2O60884 412 aa4.57□□□□□ -1.68
LRRC28-212ENST00000558911 F13A1P00488 732 aa4.57□□□□□ -1.68
LRRC28-212ENST00000558911 HSD3B2P26439 372 aa4.57□□□□□ -1.68
LRRC28-212ENST00000558911 ERVFRD-1P60508 538 aa4.57□□□□□ -1.68
LRRC28-212ENST00000558911 CYP4F8P98187 520 aa4.57□□□□□ -1.68
LRRC28-212ENST00000558911 EFEMP1Q12805 493 aa4.57□□□□□ -1.68
LRRC28-212ENST00000558911 GORABQ5T7V8 394 aa4.57□□□□□ -1.68
LRRC28-212ENST00000558911 GALNT18Q6P9A2 607 aa4.57□□□□□ -1.68
LRRC28-212ENST00000558911 HHIPL2Q6UWX4 724 aa4.57□□□□□ -1.68
LRRC28-212ENST00000558911 DAGLBQ8NCG7 672 aa4.57□□□□□ -1.68
LRRC28-212ENST00000558911 NUP43Q8NFH3 380 aa4.57□□□□□ -1.68
LRRC28-212ENST00000558911 PALD1Q9ULE6 856 aa4.57□□□□□ -1.68
LRRC28-212ENST00000558911 MRPL42Q9Y6G3 142 aaKnown RBP4.57□□□□□ -1.68
LRRC28-212ENST00000558911 AK5Q9Y6K8 562 aa4.57□□□□□ -1.68
LRRC28-212ENST00000558911 A0A1W2PQ27 194 aa4.56□□□□□ -1.68
LRRC28-212ENST00000558911 A0A1W2PQ64 194 aa4.56□□□□□ -1.68
LRRC28-212ENST00000558911 A0A1W2PQC6 194 aa4.56□□□□□ -1.68
LRRC28-212ENST00000558911 A0A1W2PQD8 194 aa4.56□□□□□ -1.68
LRRC28-212ENST00000558911 K7ESM1 405 aa4.56□□□□□ -1.68
LRRC28-212ENST00000558911 FFAR3O14843 346 aa4.56□□□□□ -1.68
LRRC28-212ENST00000558911 PEX14O75381 377 aa4.56□□□□□ -1.68
LRRC28-212ENST00000558911 STK10O94804 968 aaKnown RBP4.56□□□□□ -1.68
LRRC28-212ENST00000558911 HTR3BO95264 441 aa4.56□□□□□ -1.68
LRRC28-212ENST00000558911 PF4P02776 101 aa4.56□□□□□ -1.68
LRRC28-212ENST00000558911 SLURP1P55000 103 aa4.56□□□□□ -1.68
LRRC28-212ENST00000558911 RACK1P63244 317 aaKnown RBP4.56□□□□□ -1.68
LRRC28-212ENST00000558911 ZNF200P98182 395 aaPredicted RBP4.56□□□□□ -1.68
LRRC28-212ENST00000558911 TAF7LQ5H9L4 462 aa4.56□□□□□ -1.68
LRRC28-212ENST00000558911 RNF187Q5TA31 235 aaPredicted RBP4.56□□□□□ -1.68
LRRC28-212ENST00000558911 NT5DC1Q5TFE4 455 aa4.56□□□□□ -1.68
LRRC28-212ENST00000558911 FILIP1Q7Z7B0 1213 aa4.56□□□□□ -1.68
LRRC28-212ENST00000558911 PHC3Q8NDX5 983 aa4.56□□□□□ -1.68
LRRC28-212ENST00000558911 ZCRB1Q8TBF4 217 aaKnown RBP4.56□□□□□ -1.68
LRRC28-212ENST00000558911 ENOX1Q8TC92 643 aaKnown RBP4.56□□□□□ -1.68
LRRC28-212ENST00000558911 ZNF512BQ96KM6 892 aaPredicted RBP4.56□□□□□ -1.68
LRRC28-212ENST00000558911 CDADC1Q9BWV3 514 aa4.56□□□□□ -1.68
LRRC28-212ENST00000558911 IFT57Q9NWB7 429 aa4.56□□□□□ -1.68
LRRC28-212ENST00000558911 CHPF2Q9P2E5 772 aa4.56□□□□□ -1.68
LRRC28-212ENST00000558911 PCDHA5Q9Y5H7 936 aa4.56□□□□□ -1.68
LRRC28-212ENST00000558911 COL4A3BPQ9Y5P4 624 aa4.56□□□□□ -1.68
LRRC28-212ENST00000558911 WTIPA6NIX2 430 aaPredicted RBP4.55□□□□□ -1.68
LRRC28-212ENST00000558911 PRAMEF1O95521 474 aa4.55□□□□□ -1.68
LRRC28-212ENST00000558911 RLBP1P12271 317 aa4.55□□□□□ -1.68
LRRC28-212ENST00000558911 RAG1P15918 1043 aa4.55□□□□□ -1.68
LRRC28-212ENST00000558911 ITGAEP38570 1179 aa4.55□□□□□ -1.68
LRRC28-212ENST00000558911 IRX6P78412 446 aaPredicted RBP4.55□□□□□ -1.68
LRRC28-212ENST00000558911 FAM160A1Q05DH4 1040 aa4.55□□□□□ -1.68
LRRC28-212ENST00000558911 TMEM62Q0P6H9 643 aa4.55□□□□□ -1.68
LRRC28-212ENST00000558911 CAMK2GQ13555 558 aaPredicted RBP4.55□□□□□ -1.68
LRRC28-212ENST00000558911 ZNF827Q17R98 1081 aa4.55□□□□□ -1.68
LRRC28-212ENST00000558911 BBS9Q3SYG4 887 aa4.55□□□□□ -1.68
LRRC28-212ENST00000558911 ZNF394Q53GI3 561 aa4.55□□□□□ -1.68
LRRC28-212ENST00000558911 ARSHQ5FYA8 562 aa4.55□□□□□ -1.68
LRRC28-212ENST00000558911 VPS37DQ86XT2 251 aa4.55□□□□□ -1.68
LRRC28-212ENST00000558911 MCF2L2Q86YR7 1114 aa4.55□□□□□ -1.68
LRRC28-212ENST00000558911 ZNF655Q8N720 491 aaPredicted RBP4.55□□□□□ -1.68
LRRC28-212ENST00000558911 LINC00116Q8NCU8 138 aa4.55□□□□□ -1.68
LRRC28-212ENST00000558911 GATAD2BQ8WXI9 593 aa4.55□□□□□ -1.68
LRRC28-212ENST00000558911 VWCEQ96DN2 955 aa4.55□□□□□ -1.68
LRRC28-212ENST00000558911 SPATA25Q9BR10 227 aa4.55□□□□□ -1.68
LRRC28-212ENST00000558911 BRINP2Q9C0B6 783 aa4.55□□□□□ -1.68
LRRC28-212ENST00000558911 TNFRSF10DQ9UBN6 386 aa4.55□□□□□ -1.68
LRRC28-212ENST00000558911 SUSD2Q9UGT4 822 aa4.55□□□□□ -1.68
LRRC28-212ENST00000558911 DDX41Q9UJV9 622 aaKnown RBP4.55□□□□□ -1.68
LRRC28-212ENST00000558911 POLR3KQ9Y2Y1 108 aaPredicted RBP4.55□□□□□ -1.68
LRRC28-212ENST00000558911 PCDHGB7Q9Y5F8 929 aa4.55□□□□□ -1.68
LRRC28-212ENST00000558911 FAM221AA4D161 298 aa4.54□□□□□ -1.68
LRRC28-212ENST00000558911 FADS2P1A8MWK0 482 aa4.54□□□□□ -1.68
LRRC28-212ENST00000558911 MINDY4BA8MYZ0 360 aa4.54□□□□□ -1.68
LRRC28-212ENST00000558911 TLR3O15455 904 aaKnown RBP4.54□□□□□ -1.68
LRRC28-212ENST00000558911 PFKLP17858 780 aa4.54□□□□□ -1.68
LRRC28-212ENST00000558911 RNF4P78317 190 aa4.54□□□□□ -1.68
LRRC28-212ENST00000558911 LAPTM5Q13571 262 aa4.54□□□□□ -1.68
LRRC28-212ENST00000558911 TAF1CQ15572 869 aaPredicted RBP4.54□□□□□ -1.68
LRRC28-212ENST00000558911 HSP90AB2PQ58FF8 381 aa4.54□□□□□ -1.68
LRRC28-212ENST00000558911 ZC3H14Q6PJT7 736 aaKnown RBP4.54□□□□□ -1.68
LRRC28-212ENST00000558911 RPTNQ6XPR3 784 aa4.54□□□□□ -1.68
LRRC28-212ENST00000558911 ZNF654Q8IZM8 581 aa4.54□□□□□ -1.68
LRRC28-212ENST00000558911 DDX1Q92499 740 aaKnown RBP4.54□□□□□ -1.68
LRRC28-212ENST00000558911 MRFAP1L1Q96HT8 127 aa4.54□□□□□ -1.68
LRRC28-212ENST00000558911 FCRL2Q96LA5 508 aaPredicted RBP4.54□□□□□ -1.68
LRRC28-212ENST00000558911 PCDH12Q9NPG4 1184 aa4.54□□□□□ -1.68
LRRC28-212ENST00000558911 IMPACTQ9P2X3 320 aa4.54□□□□□ -1.68
LRRC28-212ENST00000558911 G3BP2Q9UN86 482 aaKnown RBP4.54□□□□□ -1.68
LRRC28-212ENST00000558911 FAN1Q9Y2M0 1017 aa4.54□□□□□ -1.68
LRRC28-212ENST00000558911 THOC2Q8NI27 1593 aaKnown RBP4.53□□□□□ -1.68
LRRC28-212ENST00000558911 CACNA1GO43497 2377 aa4.53□□□□□ -1.68
LRRC28-212ENST00000558911 RGS13O14921 159 aa4.53□□□□□ -1.68
LRRC28-212ENST00000558911 AKAP8O43823 692 aaKnown RBP4.53□□□□□ -1.68
LRRC28-212ENST00000558911 FSHBP01225 129 aa4.53□□□□□ -1.68
LRRC28-212ENST00000558911 POLR2BP30876 1174 aaKnown RBP4.53□□□□□ -1.68
LRRC28-212ENST00000558911 GBP2P32456 591 aaPredicted RBP4.53□□□□□ -1.68
LRRC28-212ENST00000558911 NFE2L2Q16236 605 aa4.53□□□□□ -1.68
LRRC28-212ENST00000558911 NBPF9Q3BBW0 867 aa4.53□□□□□ -1.68
LRRC28-212ENST00000558911 SNAP47Q5SQN1 464 aa4.53□□□□□ -1.68
LRRC28-212ENST00000558911 FBXO27Q8NI29 283 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms