RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-215ENST00000558787 CERS3Q8IU89 383 aa8.44□□□□□ -1.06
MARK3-215ENST00000558787 CLEC10AQ8IUN9 316 aa8.44□□□□□ -1.06
MARK3-215ENST00000558787 CCAR1Q8IX12 1150 aaKnown RBP8.44□□□□□ -1.06
MARK3-215ENST00000558787 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.44□□□□□ -1.06
MARK3-215ENST00000558787 PAWRQ96IZ0 340 aaKnown RBP8.44□□□□□ -1.06
MARK3-215ENST00000558787 HAUS7Q99871 368 aa8.44□□□□□ -1.06
MARK3-215ENST00000558787 RPAP3Q9H6T3 665 aaPredicted RBP8.44□□□□□ -1.06
MARK3-215ENST00000558787 CABP5Q9NP86 173 aa8.44□□□□□ -1.06
MARK3-215ENST00000558787 DCP1AQ9NPI6 582 aaPredicted RBP8.44□□□□□ -1.06
MARK3-215ENST00000558787 BTBD7Q9P203 1132 aa8.44□□□□□ -1.06
MARK3-215ENST00000558787 USP17L15C9J2P7 530 aa8.43□□□□□ -1.06
MARK3-215ENST00000558787 USP17L13C9JLJ4 530 aa8.43□□□□□ -1.06
MARK3-215ENST00000558787 USP17L11C9JVI0 530 aa8.43□□□□□ -1.06
MARK3-215ENST00000558787 USP17L18D6R9N7 530 aa8.43□□□□□ -1.06
MARK3-215ENST00000558787 USP17L22D6RA61 530 aa8.43□□□□□ -1.06
MARK3-215ENST00000558787 USP17L17D6RBQ6 530 aa8.43□□□□□ -1.06
MARK3-215ENST00000558787 USP17L19D6RCP7 530 aa8.43□□□□□ -1.06
MARK3-215ENST00000558787 USP17L20D6RJB6 530 aa8.43□□□□□ -1.06
MARK3-215ENST00000558787 AKR1B1P15121 316 aa8.43□□□□□ -1.06
MARK3-215ENST00000558787 FXR1P51114 621 aaKnown RBP eCLIP8.43□□□□□ -1.06
MARK3-215ENST00000558787 USP17L24Q0WX57 530 aa8.43□□□□□ -1.06
MARK3-215ENST00000558787 WDR78Q5VTH9 848 aa8.43□□□□□ -1.06
MARK3-215ENST00000558787 CATSPERGQ6ZRH7 1159 aa8.43□□□□□ -1.06
MARK3-215ENST00000558787 GPR142Q7Z601 462 aa8.43□□□□□ -1.06
MARK3-215ENST00000558787 PLEKHH3Q7Z736 793 aa8.43□□□□□ -1.06
MARK3-215ENST00000558787 SIAH1Q8IUQ4 282 aa8.43□□□□□ -1.06
MARK3-215ENST00000558787 USP6NLQ92738 828 aa8.43□□□□□ -1.06
MARK3-215ENST00000558787 C12orf42Q96LP6 360 aa8.43□□□□□ -1.06
MARK3-215ENST00000558787 HTATIP2Q9BUP3 242 aa8.43□□□□□ -1.06
MARK3-215ENST00000558787 LRRCC1Q9C099 1032 aa8.43□□□□□ -1.06
MARK3-215ENST00000558787 KIAA1683Q9H0B3 1180 aa8.43□□□□□ -1.06
MARK3-215ENST00000558787 PLXNB2O15031 1838 aa8.43□□□□□ -1.06
MARK3-215ENST00000558787 SZT2Q5T011 3432 aa8.42□□□□□ -1.06
MARK3-215ENST00000558787 USP17L12C9JPN9 530 aa8.42□□□□□ -1.06
MARK3-215ENST00000558787 USP17L21D6R901 530 aa8.42□□□□□ -1.06
MARK3-215ENST00000558787 PPFIA3O75145 1194 aa8.42□□□□□ -1.06
MARK3-215ENST00000558787 VSIG8P0DPA2 414 aa8.42□□□□□ -1.06
MARK3-215ENST00000558787 CCND3P30281 292 aaPredicted RBP8.42□□□□□ -1.06
MARK3-215ENST00000558787 MAPK4P31152 587 aa8.42□□□□□ -1.06
MARK3-215ENST00000558787 CACNB2Q08289 660 aaPredicted RBP8.42□□□□□ -1.06
MARK3-215ENST00000558787 PDE3AQ14432 1141 aa8.42□□□□□ -1.06
MARK3-215ENST00000558787 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.42□□□□□ -1.06
MARK3-215ENST00000558787 TMED8Q6PL24 325 aaPredicted RBP8.42□□□□□ -1.06
MARK3-215ENST00000558787 SPICE1Q8N0Z3 855 aa8.42□□□□□ -1.06
MARK3-215ENST00000558787 STK11IPQ8N1F8 1099 aa8.42□□□□□ -1.06
MARK3-215ENST00000558787 PUS7LQ9H0K6 701 aaKnown RBP8.42□□□□□ -1.06
MARK3-215ENST00000558787 CWC22Q9HCG8 908 aaKnown RBP8.42□□□□□ -1.06
MARK3-215ENST00000558787 HMX1Q9NP08 348 aaPredicted RBP8.42□□□□□ -1.06
MARK3-215ENST00000558787 FLRT1Q9NZU1 646 aa8.42□□□□□ -1.06
MARK3-215ENST00000558787 RABGAP1Q9Y3P9 1069 aa8.42□□□□□ -1.06
MARK3-215ENST00000558787 SLC4A4Q9Y6R1 1079 aa8.42□□□□□ -1.06
MARK3-215ENST00000558787 RPTORQ8N122 1335 aa8.42□□□□□ -1.06
MARK3-215ENST00000558787 TTLL8A6PVC2 850 aa8.41□□□□□ -1.06
MARK3-215ENST00000558787 ZKSCAN1P17029 563 aaPredicted RBP8.41□□□□□ -1.06
MARK3-215ENST00000558787 RGS2P41220 211 aa8.41□□□□□ -1.06
MARK3-215ENST00000558787 CDK8P49336 464 aa8.41□□□□□ -1.06
MARK3-215ENST00000558787 USP14P54578 494 aa8.41□□□□□ -1.06
MARK3-215ENST00000558787 CBLBQ13191 982 aa8.41□□□□□ -1.06
MARK3-215ENST00000558787 MAP3K21Q5TCX8 1036 aa8.41□□□□□ -1.06
MARK3-215ENST00000558787 C12orf60Q5U649 245 aa8.41□□□□□ -1.06
MARK3-215ENST00000558787 Q6ZVU0 165 aa8.41□□□□□ -1.06
MARK3-215ENST00000558787 NECAB2Q7Z6G3 386 aa8.41□□□□□ -1.06
MARK3-215ENST00000558787 ADAM32Q8TC27 787 aa8.41□□□□□ -1.06
MARK3-215ENST00000558787 TANGO6Q9C0B7 1094 aa8.41□□□□□ -1.06
MARK3-215ENST00000558787 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.41□□□□□ -1.06
MARK3-215ENST00000558787 CHMP4BQ9H444 224 aaKnown RBP8.41□□□□□ -1.06
MARK3-215ENST00000558787 DNMT3LQ9UJW3 386 aa8.41□□□□□ -1.06
MARK3-215ENST00000558787 NR2E3Q9Y5X4 410 aa8.41□□□□□ -1.06
MARK3-215ENST00000558787 NAV1Q8NEY1 1877 aa8.4□□□□□ -1.06
MARK3-215ENST00000558787 XRCC5P13010 732 aaKnown RBP8.4□□□□□ -1.06
MARK3-215ENST00000558787 ATP2B2Q01814 1243 aa8.4□□□□□ -1.06
MARK3-215ENST00000558787 COG2Q14746 738 aa8.4□□□□□ -1.06
MARK3-215ENST00000558787 UBE3CQ15386 1083 aa8.4□□□□□ -1.06
MARK3-215ENST00000558787 CTR9Q6PD62 1173 aa8.4□□□□□ -1.06
MARK3-215ENST00000558787 TMEM179Q6ZVK1 233 aa8.4□□□□□ -1.06
MARK3-215ENST00000558787 C7orf61Q8IZ16 206 aa8.4□□□□□ -1.06
MARK3-215ENST00000558787 NPLOC4Q8TAT6 608 aa8.4□□□□□ -1.06
MARK3-215ENST00000558787 GTF3C2Q8WUA4 911 aaPredicted RBP8.4□□□□□ -1.06
MARK3-215ENST00000558787 SOCS4Q8WXH5 440 aa8.4□□□□□ -1.06
MARK3-215ENST00000558787 DCTPP1Q9H773 170 aa8.4□□□□□ -1.06
MARK3-215ENST00000558787 ATP8A2Q9NTI2 1148 aa8.4□□□□□ -1.06
MARK3-215ENST00000558787 ECHDC1Q9NTX5 307 aa8.4□□□□□ -1.06
MARK3-215ENST00000558787 STAP2Q9UGK3 403 aa8.4□□□□□ -1.06
MARK3-215ENST00000558787 OGDHLQ9ULD0 1010 aa8.4□□□□□ -1.06
MARK3-215ENST00000558787 ZMYND8Q9ULU4 1186 aaPredicted RBP8.4□□□□□ -1.06
MARK3-215ENST00000558787 DDX60LQ5H9U9 1706 aaKnown RBP8.4□□□□□ -1.07
MARK3-215ENST00000558787 BAZ2AQ9UIF9 1905 aaKnown RBP8.39□□□□□ -1.07
MARK3-215ENST00000558787 SLC15A5A6NIM6 579 aa8.39□□□□□ -1.07
MARK3-215ENST00000558787 FIGNL2A6NMB9 653 aa8.39□□□□□ -1.07
MARK3-215ENST00000558787 RAD21O60216 631 aa8.39□□□□□ -1.07
MARK3-215ENST00000558787 EEF2P13639 858 aaKnown RBP8.39□□□□□ -1.07
MARK3-215ENST00000558787 SYN1P17600 705 aa8.39□□□□□ -1.07
MARK3-215ENST00000558787 CYP2C19P33261 490 aa8.39□□□□□ -1.07
MARK3-215ENST00000558787 CCNA1P78396 465 aa8.39□□□□□ -1.07
MARK3-215ENST00000558787 PLS1Q14651 629 aa8.39□□□□□ -1.07
MARK3-215ENST00000558787 NBPF20Q3BBV1 942 aa8.39□□□□□ -1.07
MARK3-215ENST00000558787 LBX2Q6XYB7 198 aa8.39□□□□□ -1.07
MARK3-215ENST00000558787 TRPV1Q8NER1 839 aa8.39□□□□□ -1.07
MARK3-215ENST00000558787 OTUD7AQ8TE49 926 aaPredicted RBP8.39□□□□□ -1.07
MARK3-215ENST00000558787 OSBP2Q969R2 916 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms