RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 HDAC6Q9UBN7 1215 aa17.19■□□□□ 0.34
AP4E1-202ENST00000558439 LTN1O94822 1766 aa17.19■□□□□ 0.34
AP4E1-202ENST00000558439 EEF1GP26641 437 aaKnown RBP17.19■□□□□ 0.34
AP4E1-202ENST00000558439 DPYDQ12882 1025 aa17.19■□□□□ 0.34
AP4E1-202ENST00000558439 UBE2SQ16763 222 aa17.19■□□□□ 0.34
AP4E1-202ENST00000558439 KCTD1Q719H9 257 aa17.19■□□□□ 0.34
AP4E1-202ENST00000558439 TAX1BP1Q86VP1 789 aa17.19■□□□□ 0.34
AP4E1-202ENST00000558439 SMCR8Q8TEV9 937 aaPredicted RBP17.19■□□□□ 0.34
AP4E1-202ENST00000558439 XRN1Q8IZH2 1706 aaKnown RBP17.19■□□□□ 0.34
AP4E1-202ENST00000558439 C3orf67Q6ZVT6 689 aa17.18■□□□□ 0.34
AP4E1-202ENST00000558439 XDHP47989 1333 aa17.18■□□□□ 0.34
AP4E1-202ENST00000558439 CCDC151A5D8V7 595 aa17.18■□□□□ 0.34
AP4E1-202ENST00000558439 BMP6P22004 513 aa17.18■□□□□ 0.34
AP4E1-202ENST00000558439 PPP1R2P41236 205 aa17.18■□□□□ 0.34
AP4E1-202ENST00000558439 RCAN1P53805 252 aa17.18■□□□□ 0.34
AP4E1-202ENST00000558439 VAV2P52735 878 aa17.18■□□□□ 0.34
AP4E1-202ENST00000558439 ZYXQ15942 572 aaKnown RBP17.18■□□□□ 0.34
AP4E1-202ENST00000558439 SLC9C1Q4G0N8 1177 aa17.18■□□□□ 0.34
AP4E1-202ENST00000558439 C8orf74Q6P047 294 aa17.18■□□□□ 0.34
AP4E1-202ENST00000558439 TSGA10Q9BZW7 698 aa17.18■□□□□ 0.34
AP4E1-202ENST00000558439 CCDC113Q9H0I3 377 aa17.18■□□□□ 0.34
AP4E1-202ENST00000558439 PSTPIP2Q9H939 334 aa17.18■□□□□ 0.34
AP4E1-202ENST00000558439 TMEM260Q9NX78 707 aa17.18■□□□□ 0.34
AP4E1-202ENST00000558439 TFR2Q9UP52 801 aa17.18■□□□□ 0.34
AP4E1-202ENST00000558439 IFFO1Q0D2I5 559 aa17.18■□□□□ 0.34
AP4E1-202ENST00000558439 LARP4BQ92615 738 aaKnown RBP17.18■□□□□ 0.34
AP4E1-202ENST00000558439 TRIM10Q9UDY6 481 aa17.18■□□□□ 0.34
AP4E1-202ENST00000558439 USP21Q9UK80 565 aa17.18■□□□□ 0.34
AP4E1-202ENST00000558439 MRFAP1Q9Y605 127 aa17.18■□□□□ 0.34
AP4E1-202ENST00000558439 CETN3O15182 167 aa17.17■□□□□ 0.34
AP4E1-202ENST00000558439 CCNE1P24864 410 aa17.17■□□□□ 0.34
AP4E1-202ENST00000558439 GALNT17Q6IS24 598 aa17.17■□□□□ 0.34
AP4E1-202ENST00000558439 KIAA0825Q8IV33 1275 aa17.17■□□□□ 0.34
AP4E1-202ENST00000558439 MYOCDQ8IZQ8 938 aa17.17■□□□□ 0.34
AP4E1-202ENST00000558439 LEMD3Q9Y2U8 911 aa17.17■□□□□ 0.34
AP4E1-202ENST00000558439 POTEMA6NI47 508 aa17.17■□□□□ 0.34
AP4E1-202ENST00000558439 KLHL30Q0D2K2 578 aa17.17■□□□□ 0.34
AP4E1-202ENST00000558439 MAEAQ7L5Y9 396 aa17.17■□□□□ 0.34
AP4E1-202ENST00000558439 GPBP1Q86WP2 473 aa17.17■□□□□ 0.34
AP4E1-202ENST00000558439 KLHL7Q8IXQ5 586 aa17.17■□□□□ 0.34
AP4E1-202ENST00000558439 DHTKD1Q96HY7 919 aaPredicted RBP17.17■□□□□ 0.34
AP4E1-202ENST00000558439 NOX5Q96PH1 765 aa17.17■□□□□ 0.34
AP4E1-202ENST00000558439 TMEM60Q9H2L4 133 aa17.17■□□□□ 0.34
AP4E1-202ENST00000558439 FAN1Q9Y2M0 1017 aa17.17■□□□□ 0.34
AP4E1-202ENST00000558439 JCADQ9P266 1359 aa17.16■□□□□ 0.34
AP4E1-202ENST00000558439 USP17L5A8MUK1 530 aa17.16■□□□□ 0.34
AP4E1-202ENST00000558439 FCER1AP12319 257 aa17.16■□□□□ 0.34
AP4E1-202ENST00000558439 IBSPP21815 317 aaPredicted RBP17.16■□□□□ 0.34
AP4E1-202ENST00000558439 POLR2FP61218 127 aaKnown RBP17.16■□□□□ 0.34
AP4E1-202ENST00000558439 RASSF7Q02833 373 aa17.16■□□□□ 0.34
AP4E1-202ENST00000558439 TXNRD3Q86VQ6 643 aa17.16■□□□□ 0.34
AP4E1-202ENST00000558439 AFAP1L1Q8TED9 768 aa17.16■□□□□ 0.34
AP4E1-202ENST00000558439 RIOK1Q9BRS2 568 aaKnown RBP17.16■□□□□ 0.34
AP4E1-202ENST00000558439 L2HGDHQ9H9P8 463 aa17.16■□□□□ 0.34
AP4E1-202ENST00000558439 NHEJ1Q9H9Q4 299 aaPredicted RBP17.16■□□□□ 0.34
AP4E1-202ENST00000558439 ZBTB21Q9ULJ3 1066 aa17.16■□□□□ 0.34
AP4E1-202ENST00000558439 KIAA1024Q9UPX6 916 aa17.16■□□□□ 0.34
AP4E1-202ENST00000558439 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.16■□□□□ 0.34
AP4E1-202ENST00000558439 KCNJ6P48051 423 aa17.16■□□□□ 0.34
AP4E1-202ENST00000558439 SEC23AQ15436 765 aa17.16■□□□□ 0.34
AP4E1-202ENST00000558439 RNF187Q5TA31 235 aaPredicted RBP17.16■□□□□ 0.34
AP4E1-202ENST00000558439 LSM14BQ9BX40 385 aaKnown RBP17.16■□□□□ 0.34
AP4E1-202ENST00000558439 POLD4Q9HCU8 107 aa17.16■□□□□ 0.34
AP4E1-202ENST00000558439 DDX25Q9UHL0 483 aaKnown RBP17.16■□□□□ 0.34
AP4E1-202ENST00000558439 A0A087X0B3 334 aa17.16■□□□□ 0.34
AP4E1-202ENST00000558439 CYP4A11Q02928 519 aa17.16■□□□□ 0.34
AP4E1-202ENST00000558439 PRR16Q569H4 304 aa17.16■□□□□ 0.34
AP4E1-202ENST00000558439 FAM76AQ8TAV0 307 aa17.16■□□□□ 0.34
AP4E1-202ENST00000558439 SETD1AO15047 1707 aaKnown RBP17.15■□□□□ 0.34
AP4E1-202ENST00000558439 FAM13AO94988 1023 aa17.15■□□□□ 0.34
AP4E1-202ENST00000558439 GYPCP04921 128 aa17.15■□□□□ 0.34
AP4E1-202ENST00000558439 SSR1P43307 286 aaKnown RBP17.15■□□□□ 0.34
AP4E1-202ENST00000558439 EVX2Q03828 476 aa17.15■□□□□ 0.34
AP4E1-202ENST00000558439 PKN1Q16512 942 aa17.15■□□□□ 0.34
AP4E1-202ENST00000558439 ARHGEF1Q92888 912 aaKnown RBP17.15■□□□□ 0.34
AP4E1-202ENST00000558439 CEP95Q96GE4 821 aa17.15■□□□□ 0.34
AP4E1-202ENST00000558439 NARFQ9UHQ1 456 aa17.15■□□□□ 0.34
AP4E1-202ENST00000558439 GOLGA6BA6NDN3 693 aa17.15■□□□□ 0.34
AP4E1-202ENST00000558439 ORC4O43929 436 aa17.15■□□□□ 0.34
AP4E1-202ENST00000558439 VEGFAP15692 232 aaPredicted RBP17.15■□□□□ 0.34
AP4E1-202ENST00000558439 MAP3K9P80192 1104 aa17.15■□□□□ 0.34
AP4E1-202ENST00000558439 FAM26FQ5R3K3 315 aa17.15■□□□□ 0.34
AP4E1-202ENST00000558439 CLEC10AQ8IUN9 316 aa17.15■□□□□ 0.34
AP4E1-202ENST00000558439 PANK4Q9NVE7 773 aa17.15■□□□□ 0.34
AP4E1-202ENST00000558439 PCDHB13Q9Y5F0 798 aa17.15■□□□□ 0.34
AP4E1-202ENST00000558439 CNTNAP5Q8WYK1 1306 aa17.15■□□□□ 0.34
AP4E1-202ENST00000558439 PPP1R3GB7ZBB8 358 aa17.15■□□□□ 0.34
AP4E1-202ENST00000558439 IVLP07476 585 aa17.15■□□□□ 0.34
AP4E1-202ENST00000558439 SFMBT2Q5VUG0 894 aa17.15■□□□□ 0.34
AP4E1-202ENST00000558439 TBC1D22AQ8WUA7 517 aa17.15■□□□□ 0.34
AP4E1-202ENST00000558439 RPS6KA4O75676 772 aa17.14■□□□□ 0.34
AP4E1-202ENST00000558439 C12orf60Q5U649 245 aa17.14■□□□□ 0.34
AP4E1-202ENST00000558439 LINC00116Q8NCU8 138 aa17.14■□□□□ 0.34
AP4E1-202ENST00000558439 LGALS16A8MUM7 142 aa17.14■□□□□ 0.33
AP4E1-202ENST00000558439 ATP2B4P23634 1241 aa17.14■□□□□ 0.33
AP4E1-202ENST00000558439 SF3B3Q15393 1217 aaKnown RBP17.14■□□□□ 0.33
AP4E1-202ENST00000558439 CFAP58Q5T655 872 aa17.14■□□□□ 0.33
AP4E1-202ENST00000558439 RGPD1P0DJD0 1748 aa17.14■□□□□ 0.33
AP4E1-202ENST00000558439 C2orf54Q08AI8 447 aa17.14■□□□□ 0.33
AP4E1-202ENST00000558439 TRIM58Q8NG06 486 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms