RNA–Protein interactions for RNA: ENST00000558212.5

TRPM1-206, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 670 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-206ENST00000558212 NEURL1BA8MQ27 555 aa8.4□□□□□ -1.06
TRPM1-206ENST00000558212 EIF2AK2P19525 551 aaKnown RBP8.4□□□□□ -1.06
TRPM1-206ENST00000558212 MMP14P50281 582 aa8.4□□□□□ -1.06
TRPM1-206ENST00000558212 RPS8P62241 208 aaKnown RBP8.4□□□□□ -1.06
TRPM1-206ENST00000558212 RACK1P63244 317 aaKnown RBP8.4□□□□□ -1.06
TRPM1-206ENST00000558212 SPRED3Q2MJR0 410 aa8.4□□□□□ -1.06
TRPM1-206ENST00000558212 PROSER3Q2NL68 480 aa8.4□□□□□ -1.06
TRPM1-206ENST00000558212 NBPF9Q3BBW0 867 aa8.4□□□□□ -1.06
TRPM1-206ENST00000558212 NBPF11Q86T75 865 aa8.4□□□□□ -1.06
TRPM1-206ENST00000558212 CD99L2Q8TCZ2 262 aa8.4□□□□□ -1.06
TRPM1-206ENST00000558212 PLD4Q96BZ4 506 aa8.4□□□□□ -1.06
TRPM1-206ENST00000558212 TINF2Q9BSI4 451 aa8.4□□□□□ -1.06
TRPM1-206ENST00000558212 ADAM19Q9H013 955 aa8.4□□□□□ -1.06
TRPM1-206ENST00000558212 RBSNQ9H1K0 784 aa8.4□□□□□ -1.06
TRPM1-206ENST00000558212 SOX13Q9UN79 622 aa8.4□□□□□ -1.06
TRPM1-206ENST00000558212 SCAF8Q9UPN6 1271 aaKnown RBP8.4□□□□□ -1.06
TRPM1-206ENST00000558212 COL1A1P02452 1464 aaPredicted RBP8.39□□□□□ -1.07
TRPM1-206ENST00000558212 IGF2BP3O00425 579 aaKnown RBP eCLIP8.39□□□□□ -1.07
TRPM1-206ENST00000558212 WNT10BO00744 389 aa8.39□□□□□ -1.07
TRPM1-206ENST00000558212 SMNDC1O75940 238 aaKnown RBP eCLIP8.39□□□□□ -1.07
TRPM1-206ENST00000558212 NEFMP07197 916 aa8.39□□□□□ -1.07
TRPM1-206ENST00000558212 CPB1P15086 417 aa8.39□□□□□ -1.07
TRPM1-206ENST00000558212 EIF2S2P20042 333 aaKnown RBP8.39□□□□□ -1.07
TRPM1-206ENST00000558212 SP3Q02447 781 aa8.39□□□□□ -1.07
TRPM1-206ENST00000558212 ARHGEF6Q15052 776 aa8.39□□□□□ -1.07
TRPM1-206ENST00000558212 SLC9C1Q4G0N8 1177 aa8.39□□□□□ -1.07
TRPM1-206ENST00000558212 ZNF394Q53GI3 561 aa8.39□□□□□ -1.07
TRPM1-206ENST00000558212 ZNF787Q6DD87 383 aa8.39□□□□□ -1.07
TRPM1-206ENST00000558212 OTUD7BQ6GQQ9 843 aa8.39□□□□□ -1.07
TRPM1-206ENST00000558212 C20orf204Q6ZNR8 217 aa8.39□□□□□ -1.07
TRPM1-206ENST00000558212 SV2BQ7L1I2 683 aa8.39□□□□□ -1.07
TRPM1-206ENST00000558212 COPS6Q7L5N1 327 aa8.39□□□□□ -1.07
TRPM1-206ENST00000558212 PODNQ7Z5L7 613 aa8.39□□□□□ -1.07
TRPM1-206ENST00000558212 APOBEC3FQ8IUX4 373 aaKnown RBP8.39□□□□□ -1.07
TRPM1-206ENST00000558212 XAGE3Q8WTP9 111 aa8.39□□□□□ -1.07
TRPM1-206ENST00000558212 RSRP1Q9BUV0 290 aa8.39□□□□□ -1.07
TRPM1-206ENST00000558212 IGFLR1Q9H665 355 aa8.39□□□□□ -1.07
TRPM1-206ENST00000558212 TTF2Q9UNY4 1162 aaKnown RBP8.39□□□□□ -1.07
TRPM1-206ENST00000558212 STARD13Q9Y3M8 1113 aa8.39□□□□□ -1.07
TRPM1-206ENST00000558212 LAMA3Q16787 3333 aa8.39□□□□□ -1.07
TRPM1-206ENST00000558212 MYO3BQ8WXR4 1341 aa8.38□□□□□ -1.07
TRPM1-206ENST00000558212 ANXA1P04083 346 aa8.38□□□□□ -1.07
TRPM1-206ENST00000558212 EPXP11678 715 aa8.38□□□□□ -1.07
TRPM1-206ENST00000558212 FAAP100Q0VG06 881 aa8.38□□□□□ -1.07
TRPM1-206ENST00000558212 AIMP1Q12904 312 aaKnown RBP8.38□□□□□ -1.07
TRPM1-206ENST00000558212 CRHR2Q13324 411 aa8.38□□□□□ -1.07
TRPM1-206ENST00000558212 PRKG1Q13976 671 aa8.38□□□□□ -1.07
TRPM1-206ENST00000558212 GRIK5Q16478 980 aa8.38□□□□□ -1.07
TRPM1-206ENST00000558212 MAP3K11Q16584 847 aa8.38□□□□□ -1.07
TRPM1-206ENST00000558212 SLC4A8Q2Y0W8 1093 aa8.38□□□□□ -1.07
TRPM1-206ENST00000558212 NAALADL2Q58DX5 795 aa8.38□□□□□ -1.07
TRPM1-206ENST00000558212 C1orf229Q6ZS94 237 aaPredicted RBP8.38□□□□□ -1.07
TRPM1-206ENST00000558212 BSNDQ8WZ55 320 aa8.38□□□□□ -1.07
TRPM1-206ENST00000558212 FAM89AQ96GI7 184 aa8.38□□□□□ -1.07
TRPM1-206ENST00000558212 WNK4Q96J92 1243 aa8.38□□□□□ -1.07
TRPM1-206ENST00000558212 NECAB3Q96P71 396 aaPredicted RBP8.38□□□□□ -1.07
TRPM1-206ENST00000558212 MUC3BQ9H195 1237 aa8.38□□□□□ -1.07
TRPM1-206ENST00000558212 GGT7Q9UJ14 662 aa8.38□□□□□ -1.07
TRPM1-206ENST00000558212 ANGEL1Q9UNK9 670 aaKnown RBP8.38□□□□□ -1.07
TRPM1-206ENST00000558212 XDHP47989 1333 aa8.37□□□□□ -1.07
TRPM1-206ENST00000558212 ENC1O14682 589 aa8.37□□□□□ -1.07
TRPM1-206ENST00000558212 SLURP2P0DP57 97 aa8.37□□□□□ -1.07
TRPM1-206ENST00000558212 TBC1D8BQ0IIM8 1120 aa8.37□□□□□ -1.07
TRPM1-206ENST00000558212 CNGB1Q14028 1251 aaPredicted RBP8.37□□□□□ -1.07
TRPM1-206ENST00000558212 LCE2CQ5TA81 110 aa8.37□□□□□ -1.07
TRPM1-206ENST00000558212 CEP135Q66GS9 1140 aa8.37□□□□□ -1.07
TRPM1-206ENST00000558212 VN1R5Q7Z5H4 357 aa8.37□□□□□ -1.07
TRPM1-206ENST00000558212 IRF7Q92985 503 aa8.37□□□□□ -1.07
TRPM1-206ENST00000558212 ACDQ96AP0 544 aa8.37□□□□□ -1.07
TRPM1-206ENST00000558212 SMG9Q9H0W8 520 aaKnown RBP8.37□□□□□ -1.07
TRPM1-206ENST00000558212 PRO3102Q9H379 93 aa8.37□□□□□ -1.07
TRPM1-206ENST00000558212 SEC31BQ9NQW1 1179 aa8.37□□□□□ -1.07
TRPM1-206ENST00000558212 TSPYL4Q9UJ04 414 aa8.37□□□□□ -1.07
TRPM1-206ENST00000558212 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.37□□□□□ -1.07
TRPM1-206ENST00000558212 ZNF646O15015 1829 aaPredicted RBP8.36□□□□□ -1.07
TRPM1-206ENST00000558212 A0A1W2PPC1 479 aa8.36□□□□□ -1.07
TRPM1-206ENST00000558212 IRS4O14654 1257 aaPredicted RBP8.36□□□□□ -1.07
TRPM1-206ENST00000558212 B3GALT4O96024 378 aa8.36□□□□□ -1.07
TRPM1-206ENST00000558212 CCDC85BQ15834 202 aaPredicted RBP8.36□□□□□ -1.07
TRPM1-206ENST00000558212 NFE2L2Q16236 605 aa8.36□□□□□ -1.07
TRPM1-206ENST00000558212 DACT2Q5SW24 774 aa8.36□□□□□ -1.07
TRPM1-206ENST00000558212 PSAPL1Q6NUJ1 521 aa8.36□□□□□ -1.07
TRPM1-206ENST00000558212 CACTIN-AS1Q8N1I8 211 aa8.36□□□□□ -1.07
TRPM1-206ENST00000558212 SLC43A3Q8NBI5 491 aa8.36□□□□□ -1.07
TRPM1-206ENST00000558212 PLBD2Q8NHP8 589 aa8.36□□□□□ -1.07
TRPM1-206ENST00000558212 ISCA1Q9BUE6 129 aa8.36□□□□□ -1.07
TRPM1-206ENST00000558212 CEP44Q9C0F1 390 aa8.36□□□□□ -1.07
TRPM1-206ENST00000558212 CLEC4MQ9H2X3 399 aaPredicted RBP8.36□□□□□ -1.07
TRPM1-206ENST00000558212 COPRSQ9NQ92 184 aa8.36□□□□□ -1.07
TRPM1-206ENST00000558212 BABAM1Q9NWV8 329 aa8.36□□□□□ -1.07
TRPM1-206ENST00000558212 AKAP2Q9Y2D5 859 aa8.36□□□□□ -1.07
TRPM1-206ENST00000558212 PCDHGB7Q9Y5F8 929 aa8.36□□□□□ -1.07
TRPM1-206ENST00000558212 PTCH2Q9Y6C5 1203 aa8.36□□□□□ -1.07
TRPM1-206ENST00000558212 MED23Q9ULK4 1368 aa8.35□□□□□ -1.07
TRPM1-206ENST00000558212 SASH1O94885 1247 aa8.35□□□□□ -1.07
TRPM1-206ENST00000558212 CELA3AP09093 270 aa8.35□□□□□ -1.07
TRPM1-206ENST00000558212 RLBP1P12271 317 aa8.35□□□□□ -1.07
TRPM1-206ENST00000558212 PTPRAP18433 802 aa8.35□□□□□ -1.07
TRPM1-206ENST00000558212 CAP1Q01518 475 aa8.35□□□□□ -1.07
TRPM1-206ENST00000558212 TRIM28Q13263 835 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms